Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES17386
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:60200470:60207218:-1 gene:SORBI_3008G168100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGATGGTCGCGAGCAGGGAGAGGCGGCTCTCCCCGCCGGGCGGCGCCGCCCAGGGC
GCGCCGCAGGTGGACGCGGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCGCTG
GAGCGCGTCTACAGCGAGTGCCCCAAGCCCAGCTCGCTCCGCCGGCAGCAGCTCATCCGC
GACTGCCCCATCCTCAGCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACCGC
AGATGCCGGGAGAAGCAGCGCAAGGAGTCTTCTCGTCTACAAACCGTGAACCGGAAGCTG
AGCGCGATGAATAAGCTGCTGATGGAGGAGAATGACCGGCTGCAGAAGCAGGTGTCCCGT
CTCGTCTTTGACAACGGGTATATGAAGAATCGACTCCACAGTCCTTCTGTAGCCACCACC
GACACAAGCTGTGAGTCTGTGGTGACAAGTGGTCACCACAACCAACAGCAAAACCCAGCA
GTTCTGCATCCTCCACAAAGGGATGCGAACAACCCAGCAGGTCTACTCGCTATTGCTGAG
GAGACATTGGCAGAGTTCATGTCCAAGGCGACTGGAACTGCTGTCAACTGGGTGCAAATG
GTTGGGATGAAGCCTGGTCCGGATTCCGTTGGAATCATCGCTGTTTCGCACAACTGCAGT
GGCGTAGCAGCACGAGCTTGCGGCCTTGTGAGCCTTGAGCCCACAAAGGTTGCTGAGATC
CTTAAGGATCGCGCATCGTGGTATCGAGATTGTCGGCATGTTGATATCCTCCATGTTATC
CCTACGGGTAACGGTGGAACAATTGAGCTGATCTATATGCAGACTTATGCACTGACAACT
CTGGCGGAACCGCGCGACTTTTGGACGCTCCGATACACTAGTGGTCTTGATGATGGCAGT
CTTGTGATCTGCGAAAGGTCATTGACTCAGTCCACTGGAGGTCCTTCTGGACCTAACACT
CCAAATTTTATCAGAGCTGAGGTGCTTCCTAGTGGTTATCTGATTCGACCTTGTGATGGG
GGAGGTTCCATGATTTACATTGTGGATCATGTTGATCTGAATGCTTCTAGTGTGCCCGAG
GTTCTTCGGCCACTCTATGAATCTCCTAAGATACTGGCACAGAAGATGACTGCTGCGGCA
TTGCGACACATTAGGCAAATTGCACATGAATCAAGTGGTGAAATGCCCTATGGTGTTGGT
CGACAGCCGGCTGTTCTCAGAACTTTCAGTCAAAGGCTCAGCAGAGGCTTCAATGATGCT
GTGAGCGGCTTTCCAGACGATGGCTGGTCTTCTTTGTTGAGTAGTGATGGTGCTGAGGAT
ATTACAATTTCAATCAACTCATCTCCAAACAAACTTATTGGATCTCATGTCAGCCCTTCC
CCATTCTTTTCTGCTATGGGGGGTGGCATCATGTGTGCAAAAGCATCAATGTTACTGCAG
AATGTGCCACCTGCTATACTTGTGCGATTTTTGAGGGAGCATCGCTCTGAATGGGCTGAT
CCTGGTGTTGATGCTTATTCTGCTGCCTCTTTGAGGGCCAACCCATATGCTGTTCCAGGT
TTAAGGGCTGGTGGGTTTATGGGCAACCAGGTTATACTACCCCTTGCACGCACCTTGGAG
CATGAAGAGTGCTTGGAGGTTATTAGGCTTGAAGGACATGGCTTTAGCCATGAGGAGGTG
CTCATGTCTCGGGATATGTTTCTTCTGCAGTTGTGCAGTGGTGTTGATGAGAATGCACCT
GGTGCATGTGCACAGCTTGTCTTTGCTCCTATTGATGAATCTTTTGCTGATGATGCACCG
TTGCTACCCTCAGGCTTCCGTGTGATACCACTTGATGCTAAGACGGATGTGCCATCTGCC
ACACGCACACTCGACCTTGCTTCTGCACTGGAGGTTGGATCAGGTGGAGGTCTGCGTGCT
TTAAGCGATAGTTCCGGCACATGCACCACGAGATCTGTCCTGACCATCGCCTTCCAGTTT
TCGTTCGAGAATCACCTTCGCGATAGTGTGGCAGCAATGGCCAGGCAGTATGTCAGGGGT
GTGATGGCGTCTGTGCAGAGGGTGGCCATGGCAATTGCTCCTTCTCGCCTTGGCCCGCAT
ATCGAACTGAAGCATCCACCGGGCTCTCCTGAGGCACTTGCTCTAGCTACGTGGATCGGC
AGGAGCTACAGGGCGCACACTGGAACGGAGATCCGCTGGTCGGACACTGAAGGCGCGGAT
TCTCCCCTGATGCCATTCTGGAAGCACAGCGACGCAATACTCTGCTGCTCTCTGAAGCCG
GCTTTCACGCTCAAGTTCGCCAACAGTGCCGGCTTCGACATCCTGGAGACGACCCTGGTG
AACATCCAGGACCTGCCGCTGGAGGCTGTCCTCGACGACGACGGCCAGAAGGCCCTGTTT
GCGCAGCTCTCCAAGATCATGCAGCAGGGCCTGGCGTACCTCCCCGGCGGCGTGTGCAGA
TCGAGCATGGGGCGGCAGGCATCGTACGAGCAGGCGGTGGCGTGGAAGGTGGTTGGTGAC
GACGGTGCCCCTCAGTGCCTGGCGCTCATGCTCGTCAACTGGACCTTCATCTGA

Peptide Sequence

PEP ID

EES17386
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:60200470:60207218:-1 gene:SORBI_3008G168100 transcript:EES17386 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMVASRERRLSPPGGAAQGAPQVDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIR
DCPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSR
LVFDNGYMKNRLHSPSVATTDTSCESVVTSGHHNQQQNPAVLHPPQRDANNPAGLLAIAE
ETLAEFMSKATGTAVNWVQMVGMKPGPDSVGIIAVSHNCSGVAARACGLVSLEPTKVAEI
LKDRASWYRDCRHVDILHVIPTGNGGTIELIYMQTYALTTLAEPRDFWTLRYTSGLDDGS
LVICERSLTQSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNASSVPE
VLRPLYESPKILAQKMTAAALRHIRQIAHESSGEMPYGVGRQPAVLRTFSQRLSRGFNDA
VSGFPDDGWSSLLSSDGAEDITISINSSPNKLIGSHVSPSPFFSAMGGGIMCAKASMLLQ
NVPPAILVRFLREHRSEWADPGVDAYSAASLRANPYAVPGLRAGGFMGNQVILPLARTLE
HEECLEVIRLEGHGFSHEEVLMSRDMFLLQLCSGVDENAPGACAQLVFAPIDESFADDAP
LLPSGFRVIPLDAKTDVPSATRTLDLASALEVGSGGGLRALSDSSGTCTTRSVLTIAFQF
SFENHLRDSVAAMARQYVRGVMASVQRVAMAIAPSRLGPHIELKHPPGSPEALALATWIG
RSYRAHTGTEIRWSDTEGADSPLMPFWKHSDAILCCSLKPAFTLKFANSAGFDILETTLV
NIQDLPLEAVLDDDGQKALFAQLSKIMQQGLAYLPGGVCRSSMGRQASYEQAVAWKVVGD
DGAPQCLALMLVNWTFI

Transcript Sequence

Transcript ID

EES17386
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:60200470:60207218:-1 gene:SORBI_3008G168100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAGAGAGCTCTTCTCTTGCATGTGACCAAAAACTGAAAAAAAAAAACCACTCCTTGCAG
CTGCAGAGCAGCCGTACTGTCCTGCTATTAAACAAGCCCAGAGCTTTGCTGCTCCTCCCC
TTCACTCCACTCCCCACTCCCACCCACGCGAGCACACCCACCACCTACTCCTACTCCCCA
TGGCAGGAGCGCGCACGGGAGCCGGCTGCTGCTCCACCTCCTCTCCTCTCCTGCTGCACT
ACTAGGCGGTGCCCGCCGGCGACGACGATGGCGATGGTCGCGAGCAGGGAGAGGCGGCTC
TCCCCGCCGGGCGGCGCCGCCCAGGGCGCGCCGCAGGTGGACGCGGGCAAGTACGTGCGG
TACACGCCGGAGCAGGTGGAGGCGCTGGAGCGCGTCTACAGCGAGTGCCCCAAGCCCAGC
TCGCTCCGCCGGCAGCAGCTCATCCGCGACTGCCCCATCCTCAGCAACATCGAGCCCAAG
CAGATCAAGGTCTGGTTCCAGAACCGCAGATGCCGGGAGAAGCAGCGCAAGGAGTCTTCT
CGTCTACAAACCGTGAACCGGAAGCTGAGCGCGATGAATAAGCTGCTGATGGAGGAGAAT
GACCGGCTGCAGAAGCAGGTGTCCCGTCTCGTCTTTGACAACGGGTATATGAAGAATCGA
CTCCACAGTCCTTCTGTAGCCACCACCGACACAAGCTGTGAGTCTGTGGTGACAAGTGGT
CACCACAACCAACAGCAAAACCCAGCAGTTCTGCATCCTCCACAAAGGGATGCGAACAAC
CCAGCAGGTCTACTCGCTATTGCTGAGGAGACATTGGCAGAGTTCATGTCCAAGGCGACT
GGAACTGCTGTCAACTGGGTGCAAATGGTTGGGATGAAGCCTGGTCCGGATTCCGTTGGA
ATCATCGCTGTTTCGCACAACTGCAGTGGCGTAGCAGCACGAGCTTGCGGCCTTGTGAGC
CTTGAGCCCACAAAGGTTGCTGAGATCCTTAAGGATCGCGCATCGTGGTATCGAGATTGT
CGGCATGTTGATATCCTCCATGTTATCCCTACGGGTAACGGTGGAACAATTGAGCTGATC
TATATGCAGACTTATGCACTGACAACTCTGGCGGAACCGCGCGACTTTTGGACGCTCCGA
TACACTAGTGGTCTTGATGATGGCAGTCTTGTGATCTGCGAAAGGTCATTGACTCAGTCC
ACTGGAGGTCCTTCTGGACCTAACACTCCAAATTTTATCAGAGCTGAGGTGCTTCCTAGT
GGTTATCTGATTCGACCTTGTGATGGGGGAGGTTCCATGATTTACATTGTGGATCATGTT
GATCTGAATGCTTCTAGTGTGCCCGAGGTTCTTCGGCCACTCTATGAATCTCCTAAGATA
CTGGCACAGAAGATGACTGCTGCGGCATTGCGACACATTAGGCAAATTGCACATGAATCA
AGTGGTGAAATGCCCTATGGTGTTGGTCGACAGCCGGCTGTTCTCAGAACTTTCAGTCAA
AGGCTCAGCAGAGGCTTCAATGATGCTGTGAGCGGCTTTCCAGACGATGGCTGGTCTTCT
TTGTTGAGTAGTGATGGTGCTGAGGATATTACAATTTCAATCAACTCATCTCCAAACAAA
CTTATTGGATCTCATGTCAGCCCTTCCCCATTCTTTTCTGCTATGGGGGGTGGCATCATG
TGTGCAAAAGCATCAATGTTACTGCAGAATGTGCCACCTGCTATACTTGTGCGATTTTTG
AGGGAGCATCGCTCTGAATGGGCTGATCCTGGTGTTGATGCTTATTCTGCTGCCTCTTTG
AGGGCCAACCCATATGCTGTTCCAGGTTTAAGGGCTGGTGGGTTTATGGGCAACCAGGTT
ATACTACCCCTTGCACGCACCTTGGAGCATGAAGAGTGCTTGGAGGTTATTAGGCTTGAA
GGACATGGCTTTAGCCATGAGGAGGTGCTCATGTCTCGGGATATGTTTCTTCTGCAGTTG
TGCAGTGGTGTTGATGAGAATGCACCTGGTGCATGTGCACAGCTTGTCTTTGCTCCTATT
GATGAATCTTTTGCTGATGATGCACCGTTGCTACCCTCAGGCTTCCGTGTGATACCACTT
GATGCTAAGACGGATGTGCCATCTGCCACACGCACACTCGACCTTGCTTCTGCACTGGAG
GTTGGATCAGGTGGAGGTCTGCGTGCTTTAAGCGATAGTTCCGGCACATGCACCACGAGA
TCTGTCCTGACCATCGCCTTCCAGTTTTCGTTCGAGAATCACCTTCGCGATAGTGTGGCA
GCAATGGCCAGGCAGTATGTCAGGGGTGTGATGGCGTCTGTGCAGAGGGTGGCCATGGCA
ATTGCTCCTTCTCGCCTTGGCCCGCATATCGAACTGAAGCATCCACCGGGCTCTCCTGAG
GCACTTGCTCTAGCTACGTGGATCGGCAGGAGCTACAGGGCGCACACTGGAACGGAGATC
CGCTGGTCGGACACTGAAGGCGCGGATTCTCCCCTGATGCCATTCTGGAAGCACAGCGAC
GCAATACTCTGCTGCTCTCTGAAGCCGGCTTTCACGCTCAAGTTCGCCAACAGTGCCGGC
TTCGACATCCTGGAGACGACCCTGGTGAACATCCAGGACCTGCCGCTGGAGGCTGTCCTC
GACGACGACGGCCAGAAGGCCCTGTTTGCGCAGCTCTCCAAGATCATGCAGCAGGGCCTG
GCGTACCTCCCCGGCGGCGTGTGCAGATCGAGCATGGGGCGGCAGGCATCGTACGAGCAG
GCGGTGGCGTGGAAGGTGGTTGGTGACGACGGTGCCCCTCAGTGCCTGGCGCTCATGCTC
GTCAACTGGACCTTCATCTGACGCTCCGCGTTTCTGAGGTTCACAGCCTCGCTCGGCGGC
GCCAGATCGGACGTCGCCTTTATCCTACTACTACTACTACGTATTATTAGTTGCTTTTCC
GTTGTACCTGTGTGCTACAACTGCTCGAGACGATGAGATGTTTACTGTTCCTGTGTATGA
AGTAAGTGTAATGTGGATCGAGAGTTGGAGACGATGTTAGTATGTCACTGCTGTTTGTGT
GTGAGACTAAAGAACCTTATTACTTCTGTTATTATCAGTCATTCTCTGGGATCTGTGTGT
TTGTGTGACTTATACCTTGTTCGCCTGAGTTTA