Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES16840
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:9198307:9203876:-1 gene:SORBI_3008G070600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGGCTCCGGCGATCGTCGCGGCGGCGGGCCTCCTGGACCCGATGGTGGCTGGAAA
ACCAAGGGGAAGAACTCGAAGAAACACGGGCAAGTAGGCGGGAGCCAATGGACACCGGGG
AGTTCCACAAATGCGACACCTAGTACAGCAAGGCCAGCATGGGGTGGCAATGGCTCCTCG
CACCCTTCTGGAAGGACTTGGGCTCAAGCTTCAGATCGTGGTGCTGGCAACAGATGCAAT
CCTAGACCGCCACCACCAACACTGCGCCCTGTTGTGACTCCACCTCTGGCAAATGGTTGG
CAGTGGCAATCCAGGCCTCGTCCATCTGGTTCTGAAGTCGAGAAGGATGATGCTTCTCCA
TCTGGTTCTGACCCTGAGGTGGAGAATGTTGATGGCAACAATGCATCAGATGATGATGAT
GATTTGAGTGATGATATCAGTGATGAATATGATTCTGATGCAAGTGAGAAAAGTTTTGAG
ACTCTAAAAACAAACAAGTGGTTCAAAAAATTCTTTGAAAAATTGAATACATTGAGTGTG
GAACAGATAAATGAACCGGCTAGGGAGTGGCATTGCCCAGCATGCAAAAATGGACCTGGG
GCAATTGACTGGTACAGAGGGCTGCAACCTTTAATGACTCATGCTAGAACAAAGGGTTCT
AAAAGGGTTAGGCTTCACAGAGAATTAGCTGCATTGCTGGGAGAGGAGCTCTCTCGCAGG
GGAACTTCAGTGGTACCAGCGGGTGAACAATTTGGGAAATGGAAAGGACTGCAAGAAAGC
ACTGATCGGGAGATAGTGTGGCCACCAATGGTTATTGTTATGAACACCTTATTGGAAAAA
GATGACGATGATAAGTGGAAGGGCATGGGGAACCAAGAGCTCCTTGATTATTTTGGAGAA
TATGCAGCAACTAAAGCACGTCATGCATATGGTCCCTCTGGGCACCGTGGTATGAGCGTG
TTAATATTTGAAAGCTCAGCTGTGGGCTACATGGAAGCTGAACGTCTGCATAGGCACTTT
GTTAATCAAGGTACAGACAGGAATGCATGGCAGCTCAACAAGGCTCGATTCGCACCTGGT
GGGAAAAGGCTGCTATTTGGTTTCTTAGCGAGCAAAGAGGATATGGAGGCTTTTAACAAG
CATTGCCATGGTAAAAGCCGTATGAAGTATGAGATGAAGTCTTACAATGAGATGGTCGTG
ATGCAAATGAAACAGATGAGTGAAGACAACCAGCAACTGAATTACCTGAAGAACAAGGTG
GTTAAGACAGAGCAGCACTCTAAAGCAGTAGAAGAATCATTGGGTGTTGTTAGCCAGAAG
CTACGTGAGACTATGGAAGAGAATATATTTATCAGGAGTAAAGCAAAAGAGAAGCACTTG
GAGTATGAGCAAGAGATGAAGTACCAGGAGGAATTTTTTCATAGTCAAATTGAGGATATT
CACAAGGCCACGGAGGACAAAGAAAAGCTGTTTGAGAAGTTGCTGCAGGAGGAGCGCTCA
AAGGCTAGACGATTTGATGTAGATTCTGGAACTACCGAAGATCGCAAGCTAAGGAAGGAA
CATGTACAGAAGTTCATTGATTGCCAGGTCAAGGATGTGGAAAAGTTTGAAGCTGAGCGG
GATGAGTTGATCAAAGTCCACGATGAGACGAAGATGAGGCTCAAGAAAGAGTACATGGAG
AAGGAGCTGGAGCTGGAGAAGGAGCTCGACGCAGCCCTGACGGGCCTGATGGAGAAGCAC
AAGCCAGATAGCTTTGAGGCCTCCAGCTCGTAA

Peptide Sequence

PEP ID

EES16840
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:9198307:9203876:-1 gene:SORBI_3008G070600 transcript:EES16840 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSGSGDRRGGGPPGPDGGWKTKGKNSKKHGQVGGSQWTPGSSTNATPSTARPAWGGNGSS
HPSGRTWAQASDRGAGNRCNPRPPPPTLRPVVTPPLANGWQWQSRPRPSGSEVEKDDASP
SGSDPEVENVDGNNASDDDDDLSDDISDEYDSDASEKSFETLKTNKWFKKFFEKLNTLSV
EQINEPAREWHCPACKNGPGAIDWYRGLQPLMTHARTKGSKRVRLHRELAALLGEELSRR
GTSVVPAGEQFGKWKGLQESTDREIVWPPMVIVMNTLLEKDDDDKWKGMGNQELLDYFGE
YAATKARHAYGPSGHRGMSVLIFESSAVGYMEAERLHRHFVNQGTDRNAWQLNKARFAPG
GKRLLFGFLASKEDMEAFNKHCHGKSRMKYEMKSYNEMVVMQMKQMSEDNQQLNYLKNKV
VKTEQHSKAVEESLGVVSQKLRETMEENIFIRSKAKEKHLEYEQEMKYQEEFFHSQIEDI
HKATEDKEKLFEKLLQEERSKARRFDVDSGTTEDRKLRKEHVQKFIDCQVKDVEKFEAER
DELIKVHDETKMRLKKEYMEKELELEKELDAALTGLMEKHKPDSFEASSS

Transcript Sequence

Transcript ID

EES16840
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:9198307:9203876:-1 gene:SORBI_3008G070600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACCCCACACCACGCCCACGCCGTAGCGGAGAGGAGAAGAGAGGACCGAGCGAGCGATC
GATGTCGGGCTCCGGCGATCGTCGCGGCGGCGGGCCTCCTGGACCCGATGGTGGCTGGAA
AACCAAGGGGAAGAACTCGAAGAAACACGGGCAAGTAGGCGGGAGCCAATGGACACCGGG
GAGTTCCACAAATGCGACACCTAGTACAGCAAGGCCAGCATGGGGTGGCAATGGCTCCTC
GCACCCTTCTGGAAGGACTTGGGCTCAAGCTTCAGATCGTGGTGCTGGCAACAGATGCAA
TCCTAGACCGCCACCACCAACACTGCGCCCTGTTGTGACTCCACCTCTGGCAAATGGTTG
GCAGTGGCAATCCAGGCCTCGTCCATCTGGTTCTGAAGTCGAGAAGGATGATGCTTCTCC
ATCTGGTTCTGACCCTGAGGTGGAGAATGTTGATGGCAACAATGCATCAGATGATGATGA
TGATTTGAGTGATGATATCAGTGATGAATATGATTCTGATGCAAGTGAGAAAAGTTTTGA
GACTCTAAAAACAAACAAGTGGTTCAAAAAATTCTTTGAAAAATTGAATACATTGAGTGT
GGAACAGATAAATGAACCGGCTAGGGAGTGGCATTGCCCAGCATGCAAAAATGGACCTGG
GGCAATTGACTGGTACAGAGGGCTGCAACCTTTAATGACTCATGCTAGAACAAAGGGTTC
TAAAAGGGTTAGGCTTCACAGAGAATTAGCTGCATTGCTGGGAGAGGAGCTCTCTCGCAG
GGGAACTTCAGTGGTACCAGCGGGTGAACAATTTGGGAAATGGAAAGGACTGCAAGAAAG
CACTGATCGGGAGATAGTGTGGCCACCAATGGTTATTGTTATGAACACCTTATTGGAAAA
AGATGACGATGATAAGTGGAAGGGCATGGGGAACCAAGAGCTCCTTGATTATTTTGGAGA
ATATGCAGCAACTAAAGCACGTCATGCATATGGTCCCTCTGGGCACCGTGGTATGAGCGT
GTTAATATTTGAAAGCTCAGCTGTGGGCTACATGGAAGCTGAACGTCTGCATAGGCACTT
TGTTAATCAAGGTACAGACAGGAATGCATGGCAGCTCAACAAGGCTCGATTCGCACCTGG
TGGGAAAAGGCTGCTATTTGGTTTCTTAGCGAGCAAAGAGGATATGGAGGCTTTTAACAA
GCATTGCCATGGTAAAAGCCGTATGAAGTATGAGATGAAGTCTTACAATGAGATGGTCGT
GATGCAAATGAAACAGATGAGTGAAGACAACCAGCAACTGAATTACCTGAAGAACAAGGT
GGTTAAGACAGAGCAGCACTCTAAAGCAGTAGAAGAATCATTGGGTGTTGTTAGCCAGAA
GCTACGTGAGACTATGGAAGAGAATATATTTATCAGGAGTAAAGCAAAAGAGAAGCACTT
GGAGTATGAGCAAGAGATGAAGTACCAGGAGGAATTTTTTCATAGTCAAATTGAGGATAT
TCACAAGGCCACGGAGGACAAAGAAAAGCTGTTTGAGAAGTTGCTGCAGGAGGAGCGCTC
AAAGGCTAGACGATTTGATGTAGATTCTGGAACTACCGAAGATCGCAAGCTAAGGAAGGA
ACATGTACAGAAGTTCATTGATTGCCAGGTCAAGGATGTGGAAAAGTTTGAAGCTGAGCG
GGATGAGTTGATCAAAGTCCACGATGAGACGAAGATGAGGCTCAAGAAAGAGTACATGGA
GAAGGAGCTGGAGCTGGAGAAGGAGCTCGACGCAGCCCTGACGGGCCTGATGGAGAAGCA
CAAGCCAGATAGCTTTGAGGCCTCCAGCTCGTAAAGGGGCTTCAGCGGCTTACCTCAGAT
CCTCATCAGCTTGGAGGAGCAATCTTGTAGATGCTCCTGCTTATCCATAAAAGAATGCCT
AGACATTCTGTAGATGTTGCTAAACCATGGTGTCCCTGTGGTGGCAGCACCGAGTTATAT
GGTCGCCGTAGTGGTATCTCAATCGTATTGTGTGCTTCGAGGATCTGAACACTGAGCGTT
TTGCCCGTGATGGCATATGGGTCAAACTACCTGGAGTGTGCTTTGGTTTGAATGCGGGTG
TTGGTTTTGCCTTTCTTATGCCCCGGATCATTACTGATTATGTTGCTCCGGTCATCAAAG
TGTCTGATTCAGCCATCCGAGGAAGGTCGGTTTT