Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES16538
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:1286837:1290071:-1 gene:SORBI_3008G015600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCGTGGCTGCCTGCCCTCCGTCGTCGGAGCAGAGCAGGCAGCACGCGTACGTACAG
GCCGCAGCCATCATGGGCCAATGCTGCTCCAAGGGCGCCGGGGCGGCGGCCGATGACGCG
GCGGCGCCAGACGCAAAGGCGGAGGCGCCGAGCCGCGCCGCGTCGAACGGTGGCCAGGAG
CGGCCGTCGGCGTCGTCGTCGGCGGCACCTGCTGCTGGTACCAATAACAAGCAGGCGGTG
GCGGCGTCGCCGTCCGGCGGCAGGGCCAGCACGGGCACGAGCAGCAGCAAGCCACCGGGC
CCCCTTGGCGCGGTGCTGGGGCGGCCCATGGAGGACGTGCGCGCGGCCTACTCCATGGGC
AAGGAGCTCGGGCGCGGGCAGTTCGGCGTGACGCACCTGTGCACGCACAAGGCGAGCGGC
GAGAAGCTGGCGTGCAAGACGATCGCGAAGCGGAAGCTGGCGACCAAGGAGGACGTGGAG
GACGTCCGGCGGGAGGTGCAGATCATGCACCACCTCTCCGGCCAGCCCAACGTGGTGAGC
CTCCGGGGCGCCTACGAGGACAAGCACAACGTGCACCTGGTCATGGAGCTCTGCGCCGGC
GGCGAGCTCTTCGACCGCATCATCGCCAAAGGGCAGTACACGGAGCGCGCCGCCGCGTCG
CTGCTGCGCACCATCGTGCAGATCGTGCACACCTGCCACGCCATGGGGGTGATGCACAGG
GACATCAAGCCCGAGAACTTCCTGCTCCAGAGCAAGGCCGAGGACGCGCCGCTCAAGGCC
ACCGACTTCGGCCTCTCCGTCTTCTTCAAGGAAGGGGAGGTGCTGCGGGACATCGTCGGC
AGCGCATACTACATCGCGCCGGAGGTGCTCAAGAGGAGGTACGGACCGGAGGCCGACATC
TGGAGCGTCGGCGTCATGCTCTACATCTTCCTCGCCGGCGTGCCTCCATTCTGGGCAGAG
AATGAGAACGGCATCTTCACCGCCATCCTGCGCGGGCAGCTTGACCTCTCCAGCGAGCCA
TGGCCGCACATTTCACCGGGAGCCAAGGATCTCGTCAGGAAGATGCTCCACATCAACCCC
AAGGAGCGACTAACCGCGTTCCAGGTCCTCAATCACCCATGGATCAAAGAAGACGGGGAT
GCACCTGATACACCACTTGACAATGTTGTCCTCAACAGGCTCAAGCAGTTCAGGGCCATG
AACCAGTTCAAGAAAGCAGCGCTGAGGATCATAGCTGGCTGCCTGTCTGAAGAGGAGATC
ACTGGGCTCAAGGAGATGTTCAAGAACATCGACAAAGATAACAGCGGGACCATTACGCTT
GAAGAGCTCAAAAACGGGTTGGCAAAGCATGGACCCAAGCTATCAGACGGTGAACTTCAG
CAGCTGATGGAAGCAGCTGATGCTGATGGCAACGGGTTAATTGACTACGACGAGTTCGTC
ACCGCGACAGTGCACATGAACAAATTGGATAGAGAGGAGCACCTTTACACAGCGTTTCAG
TATTTTGACAAGGACAACAGCGGGTACATTACGAGAGAAGAGCTTGAGCAAGCCTTGAAG
GAGCAAGGATTGTATGACGCCGAGAAAATCAAAGAGGTCATCTCAGATGCCGACTCTGAC
AACGATGGAAGGATAGATTATTCAGAGTTTGTGGCGATGATGAGGAAAGGGACCGCTGGT
GCTGAGGCAATGAACAAGAAGAGGCGAGACATAGTCCTAGAGTGA

Peptide Sequence

PEP ID

EES16538
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:1286837:1290071:-1 gene:SORBI_3008G015600 transcript:EES16538 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSVAACPPSSEQSRQHAYVQAAAIMGQCCSKGAGAAADDAAAPDAKAEAPSRAASNGGQE
RPSASSSAAPAAGTNNKQAVAASPSGGRASTGTSSSKPPGPLGAVLGRPMEDVRAAYSMG
KELGRGQFGVTHLCTHKASGEKLACKTIAKRKLATKEDVEDVRREVQIMHHLSGQPNVVS
LRGAYEDKHNVHLVMELCAGGELFDRIIAKGQYTERAAASLLRTIVQIVHTCHAMGVMHR
DIKPENFLLQSKAEDAPLKATDFGLSVFFKEGEVLRDIVGSAYYIAPEVLKRRYGPEADI
WSVGVMLYIFLAGVPPFWAENENGIFTAILRGQLDLSSEPWPHISPGAKDLVRKMLHINP
KERLTAFQVLNHPWIKEDGDAPDTPLDNVVLNRLKQFRAMNQFKKAALRIIAGCLSEEEI
TGLKEMFKNIDKDNSGTITLEELKNGLAKHGPKLSDGELQQLMEAADADGNGLIDYDEFV
TATVHMNKLDREEHLYTAFQYFDKDNSGYITREELEQALKEQGLYDAEKIKEVISDADSD
NDGRIDYSEFVAMMRKGTAGAEAMNKKRRDIVLE

Transcript Sequence

Transcript ID

EES16538
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:1286837:1290071:-1 gene:SORBI_3008G015600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACAACTTCACAAGCTTCCTCCACTTGATCACACAAGTGATACAACGGGTGGGGTTGTAG
TCCATGATGGCGTCTTCAGCGATCCATTGTCTAATGTCTGGAGTGTTTGTGCTTGACTAG
CTAAGAGTCAAAAGAATGCCTAACACTTCCAAATCAGGTCATGACCCCGGAATTGCATGA
CTCTTATCTCACCTGCAGTGTTCACATATATAGAAATAATACTAGGATAGCATACAGTGT
TCACATGTTTGTGCTGAGAATTGAGAAAGTAAGTTTGTCTTTAAACACATATATATATGT
GTCTCCTCACTGCTATGCACTCTGAATATAATCTGAAAGCACAGTTGGTCAGGTTTTGCC
AGAAACAGCAAGCAGCAGCCTATATATATCTGTCTGCCGCGAAACAGGAGAAAGAAACAG
CCTTCGTTCTCTTTCACTCCCGCCATTCCCTCCCTGCCCTTCAAACTCGAGAAGCAATTT
TTTTTTTAATTTCAAAAATCAACCAAAACCATCTTCTCCAAACTAATCAAGCAAAAAAGA
AACTCCATCTCTGGAGGATCGTCCGAGTCCGTTCATGTCCGTGGCTGCCTGCCCTCCGTC
GTCGGAGCAGAGCAGGCAGCACGCGTACGTACAGGCCGCAGCCATCATGGGCCAATGCTG
CTCCAAGGGCGCCGGGGCGGCGGCCGATGACGCGGCGGCGCCAGACGCAAAGGCGGAGGC
GCCGAGCCGCGCCGCGTCGAACGGTGGCCAGGAGCGGCCGTCGGCGTCGTCGTCGGCGGC
ACCTGCTGCTGGTACCAATAACAAGCAGGCGGTGGCGGCGTCGCCGTCCGGCGGCAGGGC
CAGCACGGGCACGAGCAGCAGCAAGCCACCGGGCCCCCTTGGCGCGGTGCTGGGGCGGCC
CATGGAGGACGTGCGCGCGGCCTACTCCATGGGCAAGGAGCTCGGGCGCGGGCAGTTCGG
CGTGACGCACCTGTGCACGCACAAGGCGAGCGGCGAGAAGCTGGCGTGCAAGACGATCGC
GAAGCGGAAGCTGGCGACCAAGGAGGACGTGGAGGACGTCCGGCGGGAGGTGCAGATCAT
GCACCACCTCTCCGGCCAGCCCAACGTGGTGAGCCTCCGGGGCGCCTACGAGGACAAGCA
CAACGTGCACCTGGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGCATCATCGC
CAAAGGGCAGTACACGGAGCGCGCCGCCGCGTCGCTGCTGCGCACCATCGTGCAGATCGT
GCACACCTGCCACGCCATGGGGGTGATGCACAGGGACATCAAGCCCGAGAACTTCCTGCT
CCAGAGCAAGGCCGAGGACGCGCCGCTCAAGGCCACCGACTTCGGCCTCTCCGTCTTCTT
CAAGGAAGGGGAGGTGCTGCGGGACATCGTCGGCAGCGCATACTACATCGCGCCGGAGGT
GCTCAAGAGGAGGTACGGACCGGAGGCCGACATCTGGAGCGTCGGCGTCATGCTCTACAT
CTTCCTCGCCGGCGTGCCTCCATTCTGGGCAGAGAATGAGAACGGCATCTTCACCGCCAT
CCTGCGCGGGCAGCTTGACCTCTCCAGCGAGCCATGGCCGCACATTTCACCGGGAGCCAA
GGATCTCGTCAGGAAGATGCTCCACATCAACCCCAAGGAGCGACTAACCGCGTTCCAGGT
CCTCAATCACCCATGGATCAAAGAAGACGGGGATGCACCTGATACACCACTTGACAATGT
TGTCCTCAACAGGCTCAAGCAGTTCAGGGCCATGAACCAGTTCAAGAAAGCAGCGCTGAG
GATCATAGCTGGCTGCCTGTCTGAAGAGGAGATCACTGGGCTCAAGGAGATGTTCAAGAA
CATCGACAAAGATAACAGCGGGACCATTACGCTTGAAGAGCTCAAAAACGGGTTGGCAAA
GCATGGACCCAAGCTATCAGACGGTGAACTTCAGCAGCTGATGGAAGCAGCTGATGCTGA
TGGCAACGGGTTAATTGACTACGACGAGTTCGTCACCGCGACAGTGCACATGAACAAATT
GGATAGAGAGGAGCACCTTTACACAGCGTTTCAGTATTTTGACAAGGACAACAGCGGGTA
CATTACGAGAGAAGAGCTTGAGCAAGCCTTGAAGGAGCAAGGATTGTATGACGCCGAGAA
AATCAAAGAGGTCATCTCAGATGCCGACTCTGACAACGATGGAAGGATAGATTATTCAGA
GTTTGTGGCGATGATGAGGAAAGGGACCGCTGGTGCTGAGGCAATGAACAAGAAGAGGCG
AGACATAGTCCTAGAGTGAAGCAGCAAGTGTGTAGTGTGTATAGCGCTCAAACAACATGC
AAGTTTTCACAACTGTACACTAATGCAATGGAATTACTTTTGTGATCAGTTGATGGATGG
CACGGTTGTGTACGATGTGCTATTGATAGCTGGTTTTGAAAGAAACTGATAAGGAAATG