Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES16389
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:60621259:60627921:1 gene:SORBI_3008G172600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGAACGGAACGTGCCCGGGGCCGATGAAGGCGACGTCGCAGGGGGCGTTCCAG
GGGGAGAACCCGCTGGACTACGCGCTGCCGCTGGCCATCGTCCAGATCTGCCTCGTCGTC
GTCGTCACCCGCGGCCTCGCCTACCTGCTCCGCCCGCTCCGCCAGCCCCGCGTCATCGCC
GAGATCATCGGAGGAATTCTTCTAGGCCCATCGGCGCTGGGGCGGAGCCACAAGTTCTTG
AACGCCGTGTTCCCAGCTCAGAGCATGACGGTGCTGGACACGCTGGCCAACATCGGCCTG
CTCTTCTTCCTGTTCCTCGTCGGCCTCGAGCTCGACATCTCCGCGATCCGCCGCACCGGC
AAGAAGGCCCTCGCCATTGCGCTCGCCGGCATCAGCGCCCCGTTCGCGCTCGGCATCGGC
ACGTCGTTCGCGTTCCGTGCCACCATCGTCAAAGGCACGCCGCAGGGCCCGTTCCTCGTC
TTCATGGGCGTGGCGCTCTCCATCACCGCTTTCCCGGTGCTGGCCCGCATCCTCGCCGAG
CTGAAGCTTCTGACCACGGACCTCGGTCGCATGGCCATGTCCGCCGCGGCGGTCAACGAC
GTCGCCGCCTGGATCCTGTTGGCGCTGGCCATCGCCCTCTCCGGTGACGGCTCGCCGATC
ATCTCGCTGTGGGTGCTGCTCACCGCTGCCGGCTTCGTCATCGCCATCTCCCTGTTCCTT
CGCCCGGTGCTTGCCTGGATGGCGCGCCGCTCCCCCGAGGGCGAGCCCGTCAAGGAGGTC
TACATCTGCGCCACCCTCGCCATCGTCCTCGGAGCTGGTTTCGTCACCGACACTATCGGC
ATCCATGCCCTGTTCGGTGCCTTCATGGTGGGGATCGTCGTCCCCAAGGACGGGCCGTTC
GCCGGCGTCCTCATCGAGAAGGTGGAGGATCTCATCTCGGGGCTGTTCCTCCCGCTCTAC
TTCGTCTCCAGCGGCCTCAAGACCGACGTGGCGACCATCAAGGGTGCCAAGTCCTGGGGC
CTGCTCGTGCTCGTCATCGCCAACGCTTGCCTCGGCAAGATCGGCGGCACGGTGATCACG
TCCCTGTTCGTTAAGATCCCCGTCCGTGAAGCCGTCACTCTCGGGTTCCTCATGAACACC
AAGGGGCTCGTGGAGCTGATCGTCCTCAACATCGGCCGCGACCGCAAGGTGCTGAACGAC
GAGGCGTTCGCCATCCTGGTGCTCATGGCGCTGTTCACCACCTTCATCACGACGCCCATC
GTGATGGCCATCTACAAGCCGGCGCGGCGGACGGTGCCGTACAAGCGCCGCACGGTGGAG
TGCGTCGCCCCCGGCGACGCGGACAGCGAGCTGCGCGTGCTGGCGTGCTTCCACACCAGC
CGCCACATCCCCACGCTGCTGAACCTGGTGGAGGCCTCCCGGGGCACGGCGCGCCGCCGC
CTCGCCCTGTACGCCATGCACCTGGTGGAGCTCTCGGAGCGGTCGTCGGCCATCAGCCTT
GTGCAGCGCGCGCGCCGCGACGGGATGCCCTTCTTCAACGGCAAGGAGCAGCGGACGGAG
CAGGTGGTGGTGGCGTTCGAGGCGTTCCAGCAGCTGAGCTCCGTGCGGGTGCGCGCCATG
ACGGCCATCTCGGACCTGGACACCATCCACCGGGACGTGATCGACAGCGCCGCCGACAAG
CGCGCGGCCATCGTGGTGATGCCGTACCACAAGGCGCTCCACCACGACGGCAGCTTCGTG
TCGCTGGGGTCGGCGTACCACGCCATCAACAAGCGCGTCCTCCGCGAGGCGCCCTGCTCG
GTGGCCATCCTCGTCGACCGCGGCCTCGGAGGGCACGCACAGGTGTCGGCCAAGAACGTG
TCCTTCTCCGTGGCGGCGCTCTTCTTCGGCGGGCCCGACGACTGCGAGGCGCTCGCGTAC
GCGACGCGCATGGCCGAGCACCCGGGCGTCGCCGTGACGCTGGCGAGGTTCCGGCCGACA
CGGCCGCCGCAGCTGGTGGACGAGGCCGAGAGCGCGGCCGACGAGGCGGCGGTGGAGGCG
TTCAAGGCCAAGGTGGGGGCCGTGAAGGACGGGTCGGTGCGGTTCGAGGAGCCCGAGGCG
TACACCAGGGAGCAGGTGCTGGAGACGATCGAGTCGCTGTCGGGATTCAACGTGTTCGTG
GTGGGGCGGATGCCGCCGGCGGCGCCGCTGGTGGAGAAGCCCGACGAGCTGGGCCCCGTG
GGGAGCTACCTGGTGTCGCCGGACTTCAGGACGTCGGCGTCCGTGCTGGTGATCAAGAGG
TACGACCCGGCGACCAACCCCAAGAGCAAGAGGTTCGACCCCAAGGCGAGGCCGCCGGTG
GCCACGGAGGAGGATACGCTGGACGAGGAGATGGGGATGGGCAGCTCCACCGTGGTGCCC
GTCATGCAGTCGCCGATGAGCAGCGACGACATCGTGTGA

Peptide Sequence

PEP ID

EES16389
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:60621259:60627921:1 gene:SORBI_3008G172600 transcript:EES16389 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAANGTCPGPMKATSQGAFQGENPLDYALPLAIVQICLVVVVTRGLAYLLRPLRQPRVIA
EIIGGILLGPSALGRSHKFLNAVFPAQSMTVLDTLANIGLLFFLFLVGLELDISAIRRTG
KKALAIALAGISAPFALGIGTSFAFRATIVKGTPQGPFLVFMGVALSITAFPVLARILAE
LKLLTTDLGRMAMSAAAVNDVAAWILLALAIALSGDGSPIISLWVLLTAAGFVIAISLFL
RPVLAWMARRSPEGEPVKEVYICATLAIVLGAGFVTDTIGIHALFGAFMVGIVVPKDGPF
AGVLIEKVEDLISGLFLPLYFVSSGLKTDVATIKGAKSWGLLVLVIANACLGKIGGTVIT
SLFVKIPVREAVTLGFLMNTKGLVELIVLNIGRDRKVLNDEAFAILVLMALFTTFITTPI
VMAIYKPARRTVPYKRRTVECVAPGDADSELRVLACFHTSRHIPTLLNLVEASRGTARRR
LALYAMHLVELSERSSAISLVQRARRDGMPFFNGKEQRTEQVVVAFEAFQQLSSVRVRAM
TAISDLDTIHRDVIDSAADKRAAIVVMPYHKALHHDGSFVSLGSAYHAINKRVLREAPCS
VAILVDRGLGGHAQVSAKNVSFSVAALFFGGPDDCEALAYATRMAEHPGVAVTLARFRPT
RPPQLVDEAESAADEAAVEAFKAKVGAVKDGSVRFEEPEAYTREQVLETIESLSGFNVFV
VGRMPPAAPLVEKPDELGPVGSYLVSPDFRTSASVLVIKRYDPATNPKSKRFDPKARPPV
ATEEDTLDEEMGMGSSTVVPVMQSPMSSDDIV

Transcript Sequence

Transcript ID

EES16389
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:60621259:60627921:1 gene:SORBI_3008G172600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGTAGTCCCAGCACACACACCCGCCTCTCTATCCGATTATAACCAAGTTGTGGATCGAT
CGGTTTCAAAATTTGAAACCCAGCACCACCACCACCCCACCCCACGCGGCGGCGGCGGCG
ATTGCGGCGGATGCCCCGCTGCTAGTAGCGTCGGGTGATCGGGTCGCTCTACTAGGAGTA
GCTAGCTAAGGCACCACACGCACGCACCGTCGTCGGCGACCGATCGGAGGCGGGCGAGGA
GGATGGCGGCGAACGGAACGTGCCCGGGGCCGATGAAGGCGACGTCGCAGGGGGCGTTCC
AGGGGGAGAACCCGCTGGACTACGCGCTGCCGCTGGCCATCGTCCAGATCTGCCTCGTCG
TCGTCGTCACCCGCGGCCTCGCCTACCTGCTCCGCCCGCTCCGCCAGCCCCGCGTCATCG
CCGAGATCATCGGAGGAATTCTTCTAGGCCCATCGGCGCTGGGGCGGAGCCACAAGTTCT
TGAACGCCGTGTTCCCAGCTCAGAGCATGACGGTGCTGGACACGCTGGCCAACATCGGCC
TGCTCTTCTTCCTGTTCCTCGTCGGCCTCGAGCTCGACATCTCCGCGATCCGCCGCACCG
GCAAGAAGGCCCTCGCCATTGCGCTCGCCGGCATCAGCGCCCCGTTCGCGCTCGGCATCG
GCACGTCGTTCGCGTTCCGTGCCACCATCGTCAAAGGCACGCCGCAGGGCCCGTTCCTCG
TCTTCATGGGCGTGGCGCTCTCCATCACCGCTTTCCCGGTGCTGGCCCGCATCCTCGCCG
AGCTGAAGCTTCTGACCACGGACCTCGGTCGCATGGCCATGTCCGCCGCGGCGGTCAACG
ACGTCGCCGCCTGGATCCTGTTGGCGCTGGCCATCGCCCTCTCCGGTGACGGCTCGCCGA
TCATCTCGCTGTGGGTGCTGCTCACCGCTGCCGGCTTCGTCATCGCCATCTCCCTGTTCC
TTCGCCCGGTGCTTGCCTGGATGGCGCGCCGCTCCCCCGAGGGCGAGCCCGTCAAGGAGG
TCTACATCTGCGCCACCCTCGCCATCGTCCTCGGAGCTGGTTTCGTCACCGACACTATCG
GCATCCATGCCCTGTTCGGTGCCTTCATGGTGGGGATCGTCGTCCCCAAGGACGGGCCGT
TCGCCGGCGTCCTCATCGAGAAGGTGGAGGATCTCATCTCGGGGCTGTTCCTCCCGCTCT
ACTTCGTCTCCAGCGGCCTCAAGACCGACGTGGCGACCATCAAGGGTGCCAAGTCCTGGG
GCCTGCTCGTGCTCGTCATCGCCAACGCTTGCCTCGGCAAGATCGGCGGCACGGTGATCA
CGTCCCTGTTCGTTAAGATCCCCGTCCGTGAAGCCGTCACTCTCGGGTTCCTCATGAACA
CCAAGGGGCTCGTGGAGCTGATCGTCCTCAACATCGGCCGCGACCGCAAGGTGCTGAACG
ACGAGGCGTTCGCCATCCTGGTGCTCATGGCGCTGTTCACCACCTTCATCACGACGCCCA
TCGTGATGGCCATCTACAAGCCGGCGCGGCGGACGGTGCCGTACAAGCGCCGCACGGTGG
AGTGCGTCGCCCCCGGCGACGCGGACAGCGAGCTGCGCGTGCTGGCGTGCTTCCACACCA
GCCGCCACATCCCCACGCTGCTGAACCTGGTGGAGGCCTCCCGGGGCACGGCGCGCCGCC
GCCTCGCCCTGTACGCCATGCACCTGGTGGAGCTCTCGGAGCGGTCGTCGGCCATCAGCC
TTGTGCAGCGCGCGCGCCGCGACGGGATGCCCTTCTTCAACGGCAAGGAGCAGCGGACGG
AGCAGGTGGTGGTGGCGTTCGAGGCGTTCCAGCAGCTGAGCTCCGTGCGGGTGCGCGCCA
TGACGGCCATCTCGGACCTGGACACCATCCACCGGGACGTGATCGACAGCGCCGCCGACA
AGCGCGCGGCCATCGTGGTGATGCCGTACCACAAGGCGCTCCACCACGACGGCAGCTTCG
TGTCGCTGGGGTCGGCGTACCACGCCATCAACAAGCGCGTCCTCCGCGAGGCGCCCTGCT
CGGTGGCCATCCTCGTCGACCGCGGCCTCGGAGGGCACGCACAGGTGTCGGCCAAGAACG
TGTCCTTCTCCGTGGCGGCGCTCTTCTTCGGCGGGCCCGACGACTGCGAGGCGCTCGCGT
ACGCGACGCGCATGGCCGAGCACCCGGGCGTCGCCGTGACGCTGGCGAGGTTCCGGCCGA
CACGGCCGCCGCAGCTGGTGGACGAGGCCGAGAGCGCGGCCGACGAGGCGGCGGTGGAGG
CGTTCAAGGCCAAGGTGGGGGCCGTGAAGGACGGGTCGGTGCGGTTCGAGGAGCCCGAGG
CGTACACCAGGGAGCAGGTGCTGGAGACGATCGAGTCGCTGTCGGGATTCAACGTGTTCG
TGGTGGGGCGGATGCCGCCGGCGGCGCCGCTGGTGGAGAAGCCCGACGAGCTGGGCCCCG
TGGGGAGCTACCTGGTGTCGCCGGACTTCAGGACGTCGGCGTCCGTGCTGGTGATCAAGA
GGTACGACCCGGCGACCAACCCCAAGAGCAAGAGGTTCGACCCCAAGGCGAGGCCGCCGG
TGGCCACGGAGGAGGATACGCTGGACGAGGAGATGGGGATGGGCAGCTCCACCGTGGTGC
CCGTCATGCAGTCGCCGATGAGCAGCGACGACATCGTGTGAGTACGTGTACGTATAGACA
CGACAGACGACGACCGAGCTGCATTGCATGCGCTCGCTTGCGCTGAGGTGGACGACGCGT
GTCGTTGTATGTGTATACGTACGTAGTCGCGTATTGTTTCCTGATAGTGCTCCACCTGAT
GACGAGCGTTCCTGGCCTCGATCACCTGCGTCGTTACATATGGTCGCGACGACGTGCGGT
CTTATAGGAGAGATGAAGTACTGAAAGAAGTGTATATATATATATATACTATACGTGCTT
ACTGTGACATCTGCTGTTGTACGACTAGCGTACGTACATGCATGTCTTGGGCTACTAAGT
TACCCGTACTGTACGTCTGTATTCATCAATGTATACGGCTCCTATATTTTTTCCGTTCGT
ACTGTGTATGTATT