Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES16143
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:54851004:54857189:1 gene:SORBI_3008G125100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCGGGCACCGCATCCCCGCCACGCTCCGCCTCCCGCGCGGCGGTCTGCTGCTGCTG
CTGGAGAGGAAGGGCATCACCGCTCGCCGCGGCGTGTCCGTGATGGCCGGAGGCGGCGAG
GCGGAGGAGGGCCCGCTGGGGGGTTTCCTCGAGTACATGGAGCGGCTGCGGAACTACGAG
CGCTCGGGCGTGCCGCGCGGCGCCGGCACCGACTCCGACGACGGGTTCGACCTCGGGCGC
ATGCGCAGGCTCCTCCGCCGGCTCGGCGACCCTCACACCCACTTCCCGGCTGTGCATATC
GCTGGCACCAAGGGGAAAGGTTCTACTGCTGCGTTCCTGTCCAATATCATGAGGGCGCAA
GGCTACAATGTGGGCTGTTATTCAAGCCCACATCTTCTAACAATACGTGAACGGATTTCT
GTTGGAAATGATGGAGGCCCTGTTCCAGTAGGACTGTTGAGTGATCTTTTTGATGAGGCT
AAGGAAGCTATTGATGAAGCAATAGAGTCAGAAAATGGATCCCTGACACATTTTGAGGTT
TTCACTGCTCTCTCATTTCTTCTATTCTCACAAGAAAATGTTGACATTGCCATCATTGAA
GCAGGTCTTGGTGGAGCTAGGGATGCAACAAATGTTATTCGAAGTACTGAATTAGCAGCA
TCTGTCATAACAACAGTAGGGAGGGAACATCTGGCTGCATTGGGTGGCTCCCTGCAAAGC
ATAGCAATAGCAAAGTCTGGAATCATCAAACAAGGACGACCAGTTGTGATTGGTGGACCA
TTTGCAGCAGATATTGAGCAAATTATTCGTGACAGGGCATTCTTGACACAATCTCCCGTG
ATATCTGCTTGTGATCCTGGCGTGAAGAGCTTTACAAAATGCATAGATTGGGATAATGGT
AAGCCGTATCAACGCTGTTACATCAACATAAAGATTTCAAATGATGTGCCCTTGTCCATT
GAAATGCAAGACATAAACCTCCAACTACTGGGAGATCATCAGCGTCAGAATGCTGTCACA
GCTGCTTGCGCAGCTCTTTGTCTCCGTAGTGAAGGATGGGATATCTCTGATGCTTCTATC
CAAGCGGGCCTAGAAGAGACCCAACTTCCTGGGAGGAGCCAGTTTCTCACAGCAGAGGAA
GCCTCAGTACTTGGGCTCAATGGTGCATCTACTGTACTAATCGATGGAGCGCATACTGAG
GAATCTGCAAAGGCCTTATCAGGCGTGATAAAAACTGTCAGACCAGAAGGGCCTCTAGCG
CTTGTTGTCGGAATGGCTACTGACAAGGAGCATCTCGCGTTTGCTGAGCAGCTTCTCTCA
GGTCAAACGCCTGACGTCGTTCTACTGACAGAGGCGAGCATCGCCGGAGGAACCTCCCGC
GCGATGCCAGCCTCGTCCCTGAAAGAAGTGTGGATAGCCGCAGCACGTGATCATGGCATT
GAGTGTGTGGACATCGGTGGCGTCAGTGGCGCTGAAGCCCCAGAGCACATTGGTGATCTG
TTGGGCAGTCCATCGTCGAGCTCCGGAAGAAAGCCGCCCATGGTGATCGGGTGCCAAGAC
GAGGGGCCGTTCTCCTCGAACCTGATCATTGCTGCCTCCCGGCTCCTGGAGAAGAGCAGA
GGCAGGGCTCATCCAGGCCTCATCTGCGTGACCGGCTCCCTGCATCTCGTCGGGGCCGTA
CTGCAACAGCTGGGACGGCATTAG

Peptide Sequence

PEP ID

EES16143
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:54851004:54857189:1 gene:SORBI_3008G125100 transcript:EES16143 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLGHRIPATLRLPRGGLLLLLERKGITARRGVSVMAGGGEAEEGPLGGFLEYMERLRNYE
RSGVPRGAGTDSDDGFDLGRMRRLLRRLGDPHTHFPAVHIAGTKGKGSTAAFLSNIMRAQ
GYNVGCYSSPHLLTIRERISVGNDGGPVPVGLLSDLFDEAKEAIDEAIESENGSLTHFEV
FTALSFLLFSQENVDIAIIEAGLGGARDATNVIRSTELAASVITTVGREHLAALGGSLQS
IAIAKSGIIKQGRPVVIGGPFAADIEQIIRDRAFLTQSPVISACDPGVKSFTKCIDWDNG
KPYQRCYINIKISNDVPLSIEMQDINLQLLGDHQRQNAVTAACAALCLRSEGWDISDASI
QAGLEETQLPGRSQFLTAEEASVLGLNGASTVLIDGAHTEESAKALSGVIKTVRPEGPLA
LVVGMATDKEHLAFAEQLLSGQTPDVVLLTEASIAGGTSRAMPASSLKEVWIAAARDHGI
ECVDIGGVSGAEAPEHIGDLLGSPSSSSGRKPPMVIGCQDEGPFSSNLIIAASRLLEKSR
GRAHPGLICVTGSLHLVGAVLQQLGRH

Transcript Sequence

Transcript ID

EES16143
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:54851004:54857189:1 gene:SORBI_3008G125100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTCTCGTGTGCCTGAATCATTGGCCACTAGGGCAAGACTTTTGTGTGCAAAGATTCGGAG
TATATTTAGATACTCCTCCTGTCCTTTAAAGCTTTAACTTCTAGAATTTATGTCGGTTAA
ACTTTTTTTAAGTTTGACTAACTTTATAGAAAAGAACATCAATATTTTTAATATAAAATC
AGTATCTTATGAAAATATATTATATGATAAATCTAATGGTACTAGTTTGATATTATAAAT
CTTGGTGTTTTTTAGAAATTCGGACAAAAAAGTTTTAAAAGTTTGATTTAAGATAACCTT
AGGAATTGAAGCTGAGAGTACAAATAATAGGGAACAGTAACAAAAACAACCTGGCAGTTA
GGGCCACTCTGACGCTTGGGGCCTTTTGGAAGCTGGGAATTTTTGAATCATAGAAAAAAG
AAGAGAAAAAGAATTTCGCGTTCTAAAGGGGCTGTTTCTGTATCTCGGAGTGTATGAGTA
CATAGGCTTTGCAACATCAGCATTTCTGCCATTCAACATTCGTCGGAGCCAAGAAACCAT
TATTATGGTTTCGAAACGTCCAGGAATATGAAAATTTGCTCTCCAGGACAGGAAGCAATA
GTGGAAGATAGAAAAGCGGTGGACCATCAGTTTGATACTGTAATACTTAGAACCGTCATA
CATAAAATGATACGCAGAAGACAAACGTCTAAAACCAAGCAACATTTTTTTTTTTTGATG
GAACAAAAACATGGATATACATGCATTTGGAACTTCTACGCGTGCATCACGAAACTAAAA
AGAATCAATCTTCAGACCCCAAAGGAACGCTGCATTTTCAAAGTCTGAACTGCCGTATTG
ACAGTTTTTAAGTTCAGAAATGCGTCGCCGTTGTATTAATTAATATACTTTCTTCTCCTT
ATTAATACAAGGATGCCAAGCTTTGTTCTCCTCGTTTTCTTGCCCGCAAATGGCAATGGA
CTGAGTTAACTGAAGCCGAACAGCGAGCAATTTGGGGTCTGTCAGACTTAACAACAAAGT
TCACTTTGTCAGGCAACAAGGCTTCCCATTGTTTTATTAATTCAAAAAAAATGTTTCAAT
CTCAAATCTTTCACTGATATTGTTTGACTTGAAGCGTTTTATTGGTCAAAAGAAAATATT
CTATACGTATTTTTATGTCACATAAAAATACATATAGAATTTTTTTTTGACTAATAAAAA
TTCGGTTTTTATGTCACATAAAAATACATATAGATTTTTTTTTTGACTAATAAAAATTCG
GATAAAATTCATGAGAACACCAGACTGTACAACTGCAATTCATTCAGATAAAAAGCATCT
GTAGTCGCCATTGTTGCTGACTTCAGCCTCAGTCCATCTTCAGGCTTCAGCCTTCAAGCT
CTGCTCCCTACTCCTCCGGGTCTGTCGTCTCCTCGCGGCCGTCCTCCGCTGGCGCTGCCC
GACTCCGGCGTCCTCCCCACCGACGCATCCACCGCTCAAGCCTTAGCCCAACATTCATCT
GTATCCCGTGGCAAGGATCGGGCGCGCGCGCGCGCGCTTGATTCGCCGCATCTGAGCGTC
ACGGCCGCGACCGCGCGCCTTCCGCCGCCTCCCGCCGCACGGCCGCGACGGATGCTCGGG
CACCGCATCCCCGCCACGCTCCGCCTCCCGCGCGGCGGTCTGCTGCTGCTGCTGGAGAGG
AAGGGCATCACCGCTCGCCGCGGCGTGTCCGTGATGGCCGGAGGCGGCGAGGCGGAGGAG
GGCCCGCTGGGGGGTTTCCTCGAGTACATGGAGCGGCTGCGGAACTACGAGCGCTCGGGC
GTGCCGCGCGGCGCCGGCACCGACTCCGACGACGGGTTCGACCTCGGGCGCATGCGCAGG
CTCCTCCGCCGGCTCGGCGACCCTCACACCCACTTCCCGGCTGTGCATATCGCTGGCACC
AAGGGGAAAGGTTCTACTGCTGCGTTCCTGTCCAATATCATGAGGGCGCAAGGCTACAAT
GTGGGCTGTTATTCAAGCCCACATCTTCTAACAATACGTGAACGGATTTCTGTTGGAAAT
GATGGAGGCCCTGTTCCAGTAGGACTGTTGAGTGATCTTTTTGATGAGGCTAAGGAAGCT
ATTGATGAAGCAATAGAGTCAGAAAATGGATCCCTGACACATTTTGAGGTTTTCACTGCT
CTCTCATTTCTTCTATTCTCACAAGAAAATGTTGACATTGCCATCATTGAAGCAGGTCTT
GGTGGAGCTAGGGATGCAACAAATGTTATTCGAAGTACTGAATTAGCAGCATCTGTCATA
ACAACAGTAGGGAGGGAACATCTGGCTGCATTGGGTGGCTCCCTGCAAAGCATAGCAATA
GCAAAGTCTGGAATCATCAAACAAGGACGACCAGTTGTGATTGGTGGACCATTTGCAGCA
GATATTGAGCAAATTATTCGTGACAGGGCATTCTTGACACAATCTCCCGTGATATCTGCT
TGTGATCCTGGCGTGAAGAGCTTTACAAAATGCATAGATTGGGATAATGGTAAGCCGTAT
CAACGCTGTTACATCAACATAAAGATTTCAAATGATGTGCCCTTGTCCATTGAAATGCAA
GACATAAACCTCCAACTACTGGGAGATCATCAGCGTCAGAATGCTGTCACAGCTGCTTGC
GCAGCTCTTTGTCTCCGTAGTGAAGGATGGGATATCTCTGATGCTTCTATCCAAGCGGGC
CTAGAAGAGACCCAACTTCCTGGGAGGAGCCAGTTTCTCACAGCAGAGGAAGCCTCAGTA
CTTGGGCTCAATGGTGCATCTACTGTACTAATCGATGGAGCGCATACTGAGGAATCTGCA
AAGGCCTTATCAGGCGTGATAAAAACTGTCAGACCAGAAGGGCCTCTAGCGCTTGTTGTC
GGAATGGCTACTGACAAGGAGCATCTCGCGTTTGCTGAGCAGCTTCTCTCAGGTCAAACG
CCTGACGTCGTTCTACTGACAGAGGCGAGCATCGCCGGAGGAACCTCCCGCGCGATGCCA
GCCTCGTCCCTGAAAGAAGTGTGGATAGCCGCAGCACGTGATCATGGCATTGAGTGTGTG
GACATCGGTGGCGTCAGTGGCGCTGAAGCCCCAGAGCACATTGGTGATCTGTTGGGCAGT
CCATCGTCGAGCTCCGGAAGAAAGCCGCCCATGGTGATCGGGTGCCAAGACGAGGGGCCG
TTCTCCTCGAACCTGATCATTGCTGCCTCCCGGCTCCTGGAGAAGAGCAGAGGCAGGGCT
CATCCAGGCCTCATCTGCGTGACCGGCTCCCTGCATCTCGTCGGGGCCGTACTGCAACAG
CTGGGACGGCATTAGAGGAACCAACCATATTTCATCTTTTCATGCCATGTACTACACTGG
ATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTACACTACACTGATCTCGGAGTGGTGG
GTGCTGTTGCTTAAGCTGTACCGGCTCCTGATCGAGAAATTCGAGATTGGGGAAAAATAA
TCTCGAATGCCCTTTTT