Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES15485
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:65398273:65402052:-1 gene:SORBI_3007G226800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAGCCTCCGGCTCGCCGTCACCCACTGCCCGGCTCTTCCTCTCCCGACCCCCCAT
AGCCACCTTCGCCGCCGCCAACTGCAACTCCATCCCTACCCCAATCCCCTCTCCCTCTCA
CCCCGCATCTCCTCCCACCTCTCACCTATCCCTCGCCGCCACCTGCCCCCGCTCTTCGCA
TCCGCATCGGCCTCTCAAGCGGAAACCAAGCCGCCGCCACCGCCGACGGAGGCATCGGGC
GGTGCTAAGCCGCTGCCCCTCCTCATCTCGCTTGCCGCCGGCCTCGCCGTCCGCTTCCTC
GTGCCGCGGCCGGCCGAGGTAACTCCGGAAGCATGGCAGCTCCTCTCCATCTTCCTCTCC
ACCATCGCGGGGCTCGTCCTCGGCCCGCTCCCCGTCGGTGCGTGGGCGTTCCTCGGCCTC
ACCGCCACCGTCGCCACGCGCACGCTCCCCTTCACCGCCGCGTTCGGGGCGTTCACTAAC
GAGGTCATCTGGCTCATCGTCATCTCCTTCTTCTTCGCGCGCGGCTTCGTCAAGACCGGC
CTCGGCGACCGCGTCGCCACCTACTTCGTCAAATGGCTGGGGCGCAGCACTTTGGGCCTA
TCCTATGGGCTTGCCATCAGCGAGGCTTTCATCTCGCCTGCCATGCCTAGCACTACGGCC
AGGGCAGGAGGGGTTTTCCTTCCCATCGTCAAGTCGCTGTCGCTCTCGTCGGGAAGCAAG
CCCAACGACCCATCGGCGAAGAAACTTGGCTCTTATCTTGTGCAGTCGCAGCTACAGGCA
GCTGCCAACTCCAGTGCTCTCTTCTTGACAGCGGCTGCACAGAACCTGTTGTGTCTGAAG
TTAGCAGAGGAGATTGGTGTTAATATCGGAAACCCATGGATTACTTGGTTCAAGGTTGCT
AGCGTGCCAGCACTTCTTGGGCTTTTAGTGACTCCTTATTTGATTTACAAAATATTCCCC
CCAGAAATAAAGGACACTCCTGAAGCCCCAGCATTAGCTGCCGAGAAGCTAAAGTTAATG
GGTCCGGTAACAAAAAATGAATGGGTCATGATTGCAACGATGCTTCTTGCAGTCTCACTA
TGGATTTTTGGGGAAGCTATTGGCGTATCCAGCGTTGTTGCTGCAATGATTGGACTCTCA
ATACTTCTTCTGCTTGGAGTGCTGAACTGGGAGGATTGTTTGAATGAGAAGTCTGCATGG
GACACCCTTGCTTGGTTTGCTATTTTAGTTGGTTTGGCTGGGCAGCTTACTAACCTCGGG
ATTGTGTCCTGGATGTCAAATTGTGTTGCCAAGGTTCTTCAATCTTTCTCATTGAGCTGG
CCTGCAGCATTTGGTGTTCTTCAGGCCTCATACTTCTTAATTCACTATATATTTGCAAGC
CAAACAGCACATGTTGGAGCTTTATACTCGGCATTTCTTGCCATGCATTTAGCAGCTGGT
GTGCCAGCTGTAATGTCGGCACTTGCTTTGGCATACAATGCAAACCTCTTTGGAGCACTA
ACACACTATAGCAGCGGGCAATCTGCAGTATACTTTGGAGCGGGGTATGTTGACCTTCCA
GATGTATTCAAGCTGGGTTTTATAACAGCCGCACTCAATGCCGTAGTCTGGGGAGTTGCT
GGTGCATTCTGGTGGAAATTTTTGGGTCTTTATTGA

Peptide Sequence

PEP ID

EES15485
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:65398273:65402052:-1 gene:SORBI_3007G226800 transcript:EES15485 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASLRLAVTHCPALPLPTPHSHLRRRQLQLHPYPNPLSLSPRISSHLSPIPRRHLPPLFA
SASASQAETKPPPPPTEASGGAKPLPLLISLAAGLAVRFLVPRPAEVTPEAWQLLSIFLS
TIAGLVLGPLPVGAWAFLGLTATVATRTLPFTAAFGAFTNEVIWLIVISFFFARGFVKTG
LGDRVATYFVKWLGRSTLGLSYGLAISEAFISPAMPSTTARAGGVFLPIVKSLSLSSGSK
PNDPSAKKLGSYLVQSQLQAAANSSALFLTAAAQNLLCLKLAEEIGVNIGNPWITWFKVA
SVPALLGLLVTPYLIYKIFPPEIKDTPEAPALAAEKLKLMGPVTKNEWVMIATMLLAVSL
WIFGEAIGVSSVVAAMIGLSILLLLGVLNWEDCLNEKSAWDTLAWFAILVGLAGQLTNLG
IVSWMSNCVAKVLQSFSLSWPAAFGVLQASYFLIHYIFASQTAHVGALYSAFLAMHLAAG
VPAVMSALALAYNANLFGALTHYSSGQSAVYFGAGYVDLPDVFKLGFITAALNAVVWGVA
GAFWWKFLGLY

Transcript Sequence

Transcript ID

EES15485
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:65398273:65402052:-1 gene:SORBI_3007G226800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAAACAAAGCAAACAAAAACAAATCTCGCTGTTGCTCTCCGACGACTGCAGCCACCA
CTGCCCATCCCGCTCGCCGCCGCCGCCAATGGCGAGCCTCCGGCTCGCCGTCACCCACTG
CCCGGCTCTTCCTCTCCCGACCCCCCATAGCCACCTTCGCCGCCGCCAACTGCAACTCCA
TCCCTACCCCAATCCCCTCTCCCTCTCACCCCGCATCTCCTCCCACCTCTCACCTATCCC
TCGCCGCCACCTGCCCCCGCTCTTCGCATCCGCATCGGCCTCTCAAGCGGAAACCAAGCC
GCCGCCACCGCCGACGGAGGCATCGGGCGGTGCTAAGCCGCTGCCCCTCCTCATCTCGCT
TGCCGCCGGCCTCGCCGTCCGCTTCCTCGTGCCGCGGCCGGCCGAGGTAACTCCGGAAGC
ATGGCAGCTCCTCTCCATCTTCCTCTCCACCATCGCGGGGCTCGTCCTCGGCCCGCTCCC
CGTCGGTGCGTGGGCGTTCCTCGGCCTCACCGCCACCGTCGCCACGCGCACGCTCCCCTT
CACCGCCGCGTTCGGGGCGTTCACTAACGAGGTCATCTGGCTCATCGTCATCTCCTTCTT
CTTCGCGCGCGGCTTCGTCAAGACCGGCCTCGGCGACCGCGTCGCCACCTACTTCGTCAA
ATGGCTGGGGCGCAGCACTTTGGGCCTATCCTATGGGCTTGCCATCAGCGAGGCTTTCAT
CTCGCCTGCCATGCCTAGCACTACGGCCAGGGCAGGAGGGGTTTTCCTTCCCATCGTCAA
GTCGCTGTCGCTCTCGTCGGGAAGCAAGCCCAACGACCCATCGGCGAAGAAACTTGGCTC
TTATCTTGTGCAGTCGCAGCTACAGGCAGCTGCCAACTCCAGTGCTCTCTTCTTGACAGC
GGCTGCACAGAACCTGTTGTGTCTGAAGTTAGCAGAGGAGATTGGTGTTAATATCGGAAA
CCCATGGATTACTTGGTTCAAGGTTGCTAGCGTGCCAGCACTTCTTGGGCTTTTAGTGAC
TCCTTATTTGATTTACAAAATATTCCCCCCAGAAATAAAGGACACTCCTGAAGCCCCAGC
ATTAGCTGCCGAGAAGCTAAAGTTAATGGGTCCGGTAACAAAAAATGAATGGGTCATGAT
TGCAACGATGCTTCTTGCAGTCTCACTATGGATTTTTGGGGAAGCTATTGGCGTATCCAG
CGTTGTTGCTGCAATGATTGGACTCTCAATACTTCTTCTGCTTGGAGTGCTGAACTGGGA
GGATTGTTTGAATGAGAAGTCTGCATGGGACACCCTTGCTTGGTTTGCTATTTTAGTTGG
TTTGGCTGGGCAGCTTACTAACCTCGGGATTGTGTCCTGGATGTCAAATTGTGTTGCCAA
GGTTCTTCAATCTTTCTCATTGAGCTGGCCTGCAGCATTTGGTGTTCTTCAGGCCTCATA
CTTCTTAATTCACTATATATTTGCAAGCCAAACAGCACATGTTGGAGCTTTATACTCGGC
ATTTCTTGCCATGCATTTAGCAGCTGGTGTGCCAGCTGTAATGTCGGCACTTGCTTTGGC
ATACAATGCAAACCTCTTTGGAGCACTAACACACTATAGCAGCGGGCAATCTGCAGTATA
CTTTGGAGCGGGGTATGTTGACCTTCCAGATGTATTCAAGCTGGGTTTTATAACAGCCGC
ACTCAATGCCGTAGTCTGGGGAGTTGCTGGTGCATTCTGGTGGAAATTTTTGGGTCTTTA
TTGAGTCTTGGGGCAGTAGAAGTACATGAAAATGGTACCATATATTAAACAAGTACCTCA
TGATCCACCATCGGAGGTCGGTGTTCGTTTTCCTTCTGAGGTGCCTATGAGTGCATAATA
ACAGAGGAACGCTCATCTTTAGAAAGTTTTTGAGCATGATCAACCTAGGAAGCAGATGAG
TTTCGTAGGTTGTAAAGATCATCTTATATACCCCTTGATTTGATTCATGTACCACCATAT
CTCCTCCCCACAAGGGAAATAAATGCATGAGTGACTTTTGAATTTTGATGAC