Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES15315
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:62678809:62681160:-1 gene:SORBI_3007G194400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCGCGTGTCGCCGGACGACGCTGGGCAGGAGAGGGTCATGGCAGCCGCCAAGCAG
ATCTTGAAGAGCATGGCTGTGTCCAAGAACGCCGCCGACGACATGATGCACTTCCTGTCC
ACCTTCGACCCGCGCCTGCACCCGCTCTCCTCTCCGGAGACAGGCGAGGAGGCGGCGTCT
GGCGCTGATGACGATCAAGAAGAACTAGAAGAGGAGATCGCCGCCGCGGAGGAGGTCATC
CTCCGGTGGAACTCCTCCTCGTCGCCGTCGTCTGGCGGCATGATCGCGGACTACCTCTAC
GCCGTCGACGACGCCATCGCCGCGTCCGGTCGCTCGGCCCGCGCCGCCGCCGCCGTGCAC
GCCGCCATGCCGCGCCTGGAGGAGGAGGCGCGCTCCCTGCTCTCTTCCTCGTCTCCCTCC
CTGCGGCGCCTGTCGCTGTCGTCGGACGACCTCGGCGGCGACGCGACGCCCGACGCGTCC
CCGCGCCACGACGTCACGCTCTCCCCGACTGCCGCGGCCTCCGTGGGCGCCGTCGCGGTC
CGCATGCTGCGCGCCGGGTACGGGCCAGAGCTCGCGCAGGTGTACGTGGCCGCGCGCCGC
GACGCGCTCGCGGAGTCGGTGGCGCTCCTCGGCGTCGAGGCCGTCGCCATCGAGGAGGTG
ATCCGGATGGAGTGGTCGGCGCTCGACCAGAGGATGCGGCGGTGGAGCCACGCCGTGAGG
GCCGTGGTCAGGACCTTCCTCGCGGACGAGCGCCGCCTCTGCGACGAGGTCTTCGCGTCG
GACGAGGACCTCGGCCACGAGTGCTTCGCCGACGTCGCCAGGGGATGCGTCCTGCAGCTG
CTCGCCTTCGCGGACGCGGTCGCCGTGTCGCCGCGCGCAACCGAGAAGCTGTACCGCACG
CTCGGCATGTACGAGGCGCTCGCCGACGTGCGGCCGGAGTTGGAGGCGCTCTTCGCCGCC
GACGACGCGCGCGAGTTCTTCGCGGCGGAGGTCTCGAGCACCGTCCAGCAGCTGGGCTCC
ACCGTGCGCCACACCATCGAGGAGTTCAGCCACGCCATCCACGGCGAGGCGTCGCGGAAG
CCCGTCCACGGCGGGGAGATCCACCCCATGACCCGCTACGTCCTCAACTACTGCAGCCTC
CTCGCCGACTGCCGCGGCACCCTGGACGCGGTCCTCGGCGACGCCGGCCTCGACGACACA
GCCACCGCAAACGACGACACCGCCGCCGCCTCGACGCCGTCCGCGCGCTGCATCCGCGAG
CTGCTCACGCTGCTGCTGCGGAACATCGACGACAAGTCCCGGCTGTACGACGACGCCGGG
CTGCAGAACATCTTCCTGATGAACAACCTCTACTACGTGGTGCAGAAGGTGCGGGAGTCC
CCGGCACTGCGGGAGCTCGTCGGCGACGACTGGCTCCGGCGGCACCGCGGCCAGATCCGG
CAGTACGAGACCGGCTACCTGCGGGCGTCCTGGACCGCCGTGCTGTCGCAGCTGAGGAGG
GACGACGGCGCGTCGGCGAGGCCGCCGGCAGGGCACAGGGCGCCGTCGGGCCCGTCGGCG
AAGAGCTTCAACGCGGCGTTCCAGGAGCTGTACCGGACGCAGACGGCGTGGAAGGTGGCG
GACGTCCAGCTGCGGGAGGAGCTGCGCATCGCGGTGTCGGAGCGGCTCATCCCGGCGTAC
CGGGCGTTCCTCGGGCAGGGCAGCCGGCACCCGGCGAGGCACGTCAAGTGCAGCCTCGAG
GACCTCGAGGACTACATGCTGGACTTCTTCGAAGGCGCGCAGAAGTTTGTCAGGTGGTGA

Peptide Sequence

PEP ID

EES15315
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:62678809:62681160:-1 gene:SORBI_3007G194400 transcript:EES15315 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MERVSPDDAGQERVMAAAKQILKSMAVSKNAADDMMHFLSTFDPRLHPLSSPETGEEAAS
GADDDQEELEEEIAAAEEVILRWNSSSSPSSGGMIADYLYAVDDAIAASGRSARAAAAVH
AAMPRLEEEARSLLSSSSPSLRRLSLSSDDLGGDATPDASPRHDVTLSPTAAASVGAVAV
RMLRAGYGPELAQVYVAARRDALAESVALLGVEAVAIEEVIRMEWSALDQRMRRWSHAVR
AVVRTFLADERRLCDEVFASDEDLGHECFADVARGCVLQLLAFADAVAVSPRATEKLYRT
LGMYEALADVRPELEALFAADDAREFFAAEVSSTVQQLGSTVRHTIEEFSHAIHGEASRK
PVHGGEIHPMTRYVLNYCSLLADCRGTLDAVLGDAGLDDTATANDDTAAASTPSARCIRE
LLTLLLRNIDDKSRLYDDAGLQNIFLMNNLYYVVQKVRESPALRELVGDDWLRRHRGQIR
QYETGYLRASWTAVLSQLRRDDGASARPPAGHRAPSGPSAKSFNAAFQELYRTQTAWKVA
DVQLREELRIAVSERLIPAYRAFLGQGSRHPARHVKCSLEDLEDYMLDFFEGAQKFVRW

Transcript Sequence

Transcript ID

EES15315
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:62678809:62681160:-1 gene:SORBI_3007G194400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTCACTTGACACGGTCTAAAATTCCTCTGGTTCACGGAGAGTAGTTTTTTTTAAGGACG
TAAGCAAAGATGTCAAAGGAAAGAGATTATTCTGATTATTTTTATTTAATCATCAAAGGG
AAGTATACTATAAATTATGGCCAAGATCTTTTCGGCGTGACAGACTTTCACCTTTAGAAT
CATTCCATCCTCGGCGACGACGAAGGGGGAGGAAGAAAGCTTGCTCCTTGTGTTCCCACG
ACGCCGACTGCGTCCACCGTCCATGGAGCGCGTGTCGCCGGACGACGCTGGGCAGGAGAG
GGTCATGGCAGCCGCCAAGCAGATCTTGAAGAGCATGGCTGTGTCCAAGAACGCCGCCGA
CGACATGATGCACTTCCTGTCCACCTTCGACCCGCGCCTGCACCCGCTCTCCTCTCCGGA
GACAGGCGAGGAGGCGGCGTCTGGCGCTGATGACGATCAAGAAGAACTAGAAGAGGAGAT
CGCCGCCGCGGAGGAGGTCATCCTCCGGTGGAACTCCTCCTCGTCGCCGTCGTCTGGCGG
CATGATCGCGGACTACCTCTACGCCGTCGACGACGCCATCGCCGCGTCCGGTCGCTCGGC
CCGCGCCGCCGCCGCCGTGCACGCCGCCATGCCGCGCCTGGAGGAGGAGGCGCGCTCCCT
GCTCTCTTCCTCGTCTCCCTCCCTGCGGCGCCTGTCGCTGTCGTCGGACGACCTCGGCGG
CGACGCGACGCCCGACGCGTCCCCGCGCCACGACGTCACGCTCTCCCCGACTGCCGCGGC
CTCCGTGGGCGCCGTCGCGGTCCGCATGCTGCGCGCCGGGTACGGGCCAGAGCTCGCGCA
GGTGTACGTGGCCGCGCGCCGCGACGCGCTCGCGGAGTCGGTGGCGCTCCTCGGCGTCGA
GGCCGTCGCCATCGAGGAGGTGATCCGGATGGAGTGGTCGGCGCTCGACCAGAGGATGCG
GCGGTGGAGCCACGCCGTGAGGGCCGTGGTCAGGACCTTCCTCGCGGACGAGCGCCGCCT
CTGCGACGAGGTCTTCGCGTCGGACGAGGACCTCGGCCACGAGTGCTTCGCCGACGTCGC
CAGGGGATGCGTCCTGCAGCTGCTCGCCTTCGCGGACGCGGTCGCCGTGTCGCCGCGCGC
AACCGAGAAGCTGTACCGCACGCTCGGCATGTACGAGGCGCTCGCCGACGTGCGGCCGGA
GTTGGAGGCGCTCTTCGCCGCCGACGACGCGCGCGAGTTCTTCGCGGCGGAGGTCTCGAG
CACCGTCCAGCAGCTGGGCTCCACCGTGCGCCACACCATCGAGGAGTTCAGCCACGCCAT
CCACGGCGAGGCGTCGCGGAAGCCCGTCCACGGCGGGGAGATCCACCCCATGACCCGCTA
CGTCCTCAACTACTGCAGCCTCCTCGCCGACTGCCGCGGCACCCTGGACGCGGTCCTCGG
CGACGCCGGCCTCGACGACACAGCCACCGCAAACGACGACACCGCCGCCGCCTCGACGCC
GTCCGCGCGCTGCATCCGCGAGCTGCTCACGCTGCTGCTGCGGAACATCGACGACAAGTC
CCGGCTGTACGACGACGCCGGGCTGCAGAACATCTTCCTGATGAACAACCTCTACTACGT
GGTGCAGAAGGTGCGGGAGTCCCCGGCACTGCGGGAGCTCGTCGGCGACGACTGGCTCCG
GCGGCACCGCGGCCAGATCCGGCAGTACGAGACCGGCTACCTGCGGGCGTCCTGGACCGC
CGTGCTGTCGCAGCTGAGGAGGGACGACGGCGCGTCGGCGAGGCCGCCGGCAGGGCACAG
GGCGCCGTCGGGCCCGTCGGCGAAGAGCTTCAACGCGGCGTTCCAGGAGCTGTACCGGAC
GCAGACGGCGTGGAAGGTGGCGGACGTCCAGCTGCGGGAGGAGCTGCGCATCGCGGTGTC
GGAGCGGCTCATCCCGGCGTACCGGGCGTTCCTCGGGCAGGGCAGCCGGCACCCGGCGAG
GCACGTCAAGTGCAGCCTCGAGGACCTCGAGGACTACATGCTGGACTTCTTCGAAGGCGC
GCAGAAGTTTGTCAGGTGGTGATCACCGGAGCAGAGGATCGTCTTCACACCATCCATTGG
AGGTTGGGGTATGCGTGCATCATCATGAATTCGTGGTGTTTGCGCTCCAATCTCATGATA
ATTCGATGCTGTAGATTTTGATTTTTTTTTCCTCCTCTCTTCTACTAGGTTCCTTTGTCT
ATTTTCACGTCAGTCAAACCACAGATTACACTTGCAGACAGATGTAAATATGCACCAAAT
TCAGTAGTGTATATAATCCTACTATGTTATTCGCCTGTTTATGATTTTGCTGTGGTTGTT
ATGGAAGTTAAA