Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES15085
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:57553940:57556333:-1 gene:SORBI_3007G145600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGTCGCCGACGACGGCGGAGCCGAAGGCCGAGACGACGACGGTGTTCCGCTCGACG
CTCCCGGACATCGCGATCCCGGACCACCTCCCGCTCCACGACTACGTCCTGGAGCGCCTG
GCGGAGCGCCGCGACCGCGCGTGCCTCATCGACGGCGCCACGGGGGAGACGCTCACGTTC
GGCGACGTGGACCGCGTGTCGCGCCGCGTCGCGGCGGGGATGCGCGCCGCGCTCGGCGTC
CGCAGCGGCGGGACGGTGATGCTGCTGCTCCCAAACTGCGTCGAGTTCGCGCTCGCGTTC
CTCGCGTGCTCCCGCCTCGGCGCCGCCGCCACCACGGCCAACCCGCTCCACACCCCGCCC
GAGATCGCCAAGCAGGCGGCGGCCTCCGGCGCCACCGTCGTCATCACCGAGCCGGCGTTC
GTCGGCAAGGTGCGGGGGCTCGCCGGCGTCGCCGTCGTCGCCACGGGCGACGGCGCCGAG
GGCTGCGTCTCCTTCTCCGAGCTCACCGACGCCGCCGACGACGACGACGGCTCGGCGCTG
CCGCCCATCGACGTGGCGAACGACGTGGTCGCGCTGCCCTACTCGTCCGGCACGACGGGG
CTGCCCAAGGGCGTGATGCTGTCGCACCGCGGGCTGGTGACCAGCGTGGCGCAGCTGGTG
GACGGCGACAACCCGAACCTGCACCTCCGGGAGGACGACGTCGTGCTCTGCGTGCTGCCC
ATGTTCCACGTCTACTCGCTGCACTCCATCCTGCTGTGCGGGATGCGCGCCGGCGCGGCG
CTCGTCATCATGAAGCGCTTCGACACGCTCCGCATGTTCGAGCTGGTGAAGCGGCACGGC
ATCACCGTCGTCCCGCTCGTGCTGCCCATCGCCGTGGAGATGGCCAAGAGCGACGCCATG
GACCGCCACGACCTCTCCTCGGTGCGCATGGTCATCTCGGGGGCCGCGCCCATGGGCAGG
GAGCTGCAGGACCTGCTGCGCGCCAAGCTCCCCGGCGCCGTGCTCGGGCAGGGGTACGGG
ATGACAGAGGCAGGACCCGTGCTCTCAATGTGCATGGCGTTTGCAAAGGAGCCGTTGCCG
GTGAAGTCCGGCGCCTGCGGCACGGTGGTGAGGAACGCCGAGCTCAAGATCGTCGACCCG
GACACCGGGCTGTCCCTCCGCCGCAACCAGCCCGGGGAGATTTGCATCAGGGGCAAGCAG
TTGATGAAAGGGTACCTCAACAACCCGGAGGCCACGGCGAAGACCATCGACGATGAAGGG
TGGCTGCACACCGGAGACATTGGGTACGTCGACGACGACGACGAGATCTTCATCGTCGAC
AGGCTCAAGGAGCTCATCAAGTACAAGGGGTTCCAAGTCGCTCCGGCGGAGCTCGAGGCC
ATGCTCATCGCCCACCCCAGCATCGCCGACGCCGCCGTCGTGCCAATGAAGGACGACTCC
TGCGGCGAGATCCCGGTGGCGTTCGTCGTGACGTCCGGCGGCTACGAGATGACCGAGGAC
GAGATCAAACAGTACGTGGCGAAACAGGTGGTGTTCTACAAGAGGCTGCACAAGGTCTTC
TTCGTGGAGGCTATCCCCAAGGCGCCATCTGGCAAGATTCTGAGGAAGGATCTGAGAGCA
AAGCTAGCGTCTGGATTTTCCAATGGATCATCGTGTTGA

Peptide Sequence

PEP ID

EES15085
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:57553940:57556333:-1 gene:SORBI_3007G145600 transcript:EES15085 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVSPTTAEPKAETTTVFRSTLPDIAIPDHLPLHDYVLERLAERRDRACLIDGATGETLTF
GDVDRVSRRVAAGMRAALGVRSGGTVMLLLPNCVEFALAFLACSRLGAAATTANPLHTPP
EIAKQAAASGATVVITEPAFVGKVRGLAGVAVVATGDGAEGCVSFSELTDAADDDDGSAL
PPIDVANDVVALPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGDNPNLHLREDDVVLCVLP
MFHVYSLHSILLCGMRAGAALVIMKRFDTLRMFELVKRHGITVVPLVLPIAVEMAKSDAM
DRHDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFAKEPLP
VKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKGYLNNPEATAKTIDDEG
WLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVPMKDDS
CGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKDLRA
KLASGFSNGSSC

Transcript Sequence

Transcript ID

EES15085
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:57553940:57556333:-1 gene:SORBI_3007G145600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TACGTAGCGTCAAATTATTGTTCATGCTGTCGAGCCTCTACTCTAGTTCTCAGCAGTGTG
ATGTCTAGCTAGACCTGGTCCAGTCGTCCACCAGCTTCAGCTCCCCACCAAACACCAAAA
CGCGCCTATATCAGGGCCTCCGATCCAGCGCCTTCCACTTCCCAGGAGCTCCGATCCAGC
GCCACCAACCCGGAAGCAGCAAGCTTCTTGGCTCTTGCACGTAGCTCCAATCCAGCCTCC
AGCGCCACACGTGAAGATGGTGTCGCCGACGACGGCGGAGCCGAAGGCCGAGACGACGAC
GGTGTTCCGCTCGACGCTCCCGGACATCGCGATCCCGGACCACCTCCCGCTCCACGACTA
CGTCCTGGAGCGCCTGGCGGAGCGCCGCGACCGCGCGTGCCTCATCGACGGCGCCACGGG
GGAGACGCTCACGTTCGGCGACGTGGACCGCGTGTCGCGCCGCGTCGCGGCGGGGATGCG
CGCCGCGCTCGGCGTCCGCAGCGGCGGGACGGTGATGCTGCTGCTCCCAAACTGCGTCGA
GTTCGCGCTCGCGTTCCTCGCGTGCTCCCGCCTCGGCGCCGCCGCCACCACGGCCAACCC
GCTCCACACCCCGCCCGAGATCGCCAAGCAGGCGGCGGCCTCCGGCGCCACCGTCGTCAT
CACCGAGCCGGCGTTCGTCGGCAAGGTGCGGGGGCTCGCCGGCGTCGCCGTCGTCGCCAC
GGGCGACGGCGCCGAGGGCTGCGTCTCCTTCTCCGAGCTCACCGACGCCGCCGACGACGA
CGACGGCTCGGCGCTGCCGCCCATCGACGTGGCGAACGACGTGGTCGCGCTGCCCTACTC
GTCCGGCACGACGGGGCTGCCCAAGGGCGTGATGCTGTCGCACCGCGGGCTGGTGACCAG
CGTGGCGCAGCTGGTGGACGGCGACAACCCGAACCTGCACCTCCGGGAGGACGACGTCGT
GCTCTGCGTGCTGCCCATGTTCCACGTCTACTCGCTGCACTCCATCCTGCTGTGCGGGAT
GCGCGCCGGCGCGGCGCTCGTCATCATGAAGCGCTTCGACACGCTCCGCATGTTCGAGCT
GGTGAAGCGGCACGGCATCACCGTCGTCCCGCTCGTGCTGCCCATCGCCGTGGAGATGGC
CAAGAGCGACGCCATGGACCGCCACGACCTCTCCTCGGTGCGCATGGTCATCTCGGGGGC
CGCGCCCATGGGCAGGGAGCTGCAGGACCTGCTGCGCGCCAAGCTCCCCGGCGCCGTGCT
CGGGCAGGGGTACGGGATGACAGAGGCAGGACCCGTGCTCTCAATGTGCATGGCGTTTGC
AAAGGAGCCGTTGCCGGTGAAGTCCGGCGCCTGCGGCACGGTGGTGAGGAACGCCGAGCT
CAAGATCGTCGACCCGGACACCGGGCTGTCCCTCCGCCGCAACCAGCCCGGGGAGATTTG
CATCAGGGGCAAGCAGTTGATGAAAGGGTACCTCAACAACCCGGAGGCCACGGCGAAGAC
CATCGACGATGAAGGGTGGCTGCACACCGGAGACATTGGGTACGTCGACGACGACGACGA
GATCTTCATCGTCGACAGGCTCAAGGAGCTCATCAAGTACAAGGGGTTCCAAGTCGCTCC
GGCGGAGCTCGAGGCCATGCTCATCGCCCACCCCAGCATCGCCGACGCCGCCGTCGTGCC
AATGAAGGACGACTCCTGCGGCGAGATCCCGGTGGCGTTCGTCGTGACGTCCGGCGGCTA
CGAGATGACCGAGGACGAGATCAAACAGTACGTGGCGAAACAGGTGGTGTTCTACAAGAG
GCTGCACAAGGTCTTCTTCGTGGAGGCTATCCCCAAGGCGCCATCTGGCAAGATTCTGAG
GAAGGATCTGAGAGCAAAGCTAGCGTCTGGATTTTCCAATGGATCATCGTGTTGATGCTA
CCTGAGGACCAGTTCTTTCTATACGAAAACGACGACCCCGGTTTTATTTAGTTTTTATTT
ATGCTGAACAAGCTAAAACAAAAAAGATATACAGAAAAACGGTGTAAACGAGAAGCAGTC
AAATCATGTACAAGATTTGTTGCTTTGGGAGTTATGAAAGTTCAACATTGAGTATTTTAC
TAGTAAGCATTTATTTATTGCTCTGAAAGTAACAGACAATTAACTGAGCTGCAAAAA