Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES15026
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:55786888:55797691:-1 gene:SORBI_3007G133900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTACTACGGGCACAGCAATGCCAGCACCTGTGTTTCACCCCACAGTATGGGGGGAT
TACTTTATCAAATTTGTCCCAGAGCAATTGCAGGTTTCAGATGAAAAGATGGCAGAGAGA
ATCAACCATTTAAAAGAGGAGGTAATTGGTATGTTCCAGGCTTGCAAAAATGCTGTGGAC
AAAATGAACCTAGTAGATGTGGTGCAACGAATTGGAATAGATCACCATTTTGAGGAACAG
ATCGCAACTGCCTTAACCAGCATTTATAGCACTGAATTCAATAGCTCAAGTCTACATGAG
GTTGCCCTTCGGTTTCGCTTGCTTAGGCAGCAAGGGTTTTGGGTTTCTGCAGATGAATTT
GAAAAGTTCAAGAATGAAGATGGGAGCTTTATCAGTGGTATAACCAATGACCCAAAGGGC
TTGTTGAGTTTATACAATGCAGCTCACCTTCTTACTCACGATGAGGAGATACTTGAAGAT
GCTATCTTATTTTCAAGGCAGCATCTGGAATTAATAAGGAGTAGTCTCAAGTCCCCTTTA
GCTGAACAAGTTGGTCGTGCCCTTGAAATACCATTGCCAAGAACCTTAAAGAGGGAGGAA
ACAATATCATTTATCCCAGAGTATAGCATACAAGATCAAACGTACAGCCCCGTGATATTG
GAGCTTGCCAAACTAGATTTCAACCTTCTGCAGCATCTCCATCAAAAAGAACTCAAGGAA
ATTTCTCAATGGTGGAAAGAGCTTTCGGGAGAAATTGGACTGGACTATGTAAGGGATCGG
ATTGTCGAGTGTTACTTTTGGTCTTATACTGTGCACTATGAGCAAGAGAATGCACGTGCA
CGGATGATCCTCGCCAGGTTGTTCTTGTTAACATCTTTGTTAGATGACACTTACGATGTG
CATGCAACTTTGGAGGAGGCCCGGGAGCTCAACAAAGCTATTGAAAGATGGGATGACAAT
GATGTTTCTCTTCTACCTGAGTACCTCAAGGAATTCTTTGTCAAGGTGATAAGCAACTTC
AGGGAGTTTGAGGATGAGTTGGAGTCACATGAAAAGTACCGCAATGTTTACAATATTAAA
GGGTTCCAAACATTATCCAAATATTATCTCCAAGAAGCAGAATGGTTTCATCATGGCTAC
ACTCCAAGCTTCAAAGATCAAGTGAATGTTTCTGTCATAACAGCGGGTGGTCAAGTGTTA
AGTATTGGTTTGCTTGTTGGCATGGGTCATGAAGCAACCAAAGAGGCATTCGAGTGGGCC
ACTGGTGACACTGATGCTATATGGGCTTGTGGACAGGTGTCACGTTTCATGGATGACATG
TCAGCTTTCAAGAATGGTAGAAACAACATGGATGTAGCTAGTTCTGTGGAGTGCTACATG
AAGGAACGCAATGTCCCTAGTGAGGTTGCCCTGGCAACGATAAGCTCCTTTGTTGAAGAT
GCATGGAAGACCATAAATCAAGCACCATTTAAGTATCCTACTCTATTACCGGTTGTGCAA
CGAGTTACGAGCCTAGCAAAGAGCATGACACTGTTGTTCCTTGACAAGAGGGATGCGTAC
ACATACAGCAAGGACTTCAAAACGACACTGGAGAGCCATTTCGTCAGACATATTCCACTA
TAA

Peptide Sequence

PEP ID

EES15026
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:55786888:55797691:-1 gene:SORBI_3007G133900 transcript:EES15026 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATTGTAMPAPVFHPTVWGDYFIKFVPEQLQVSDEKMAERINHLKEEVIGMFQACKNAVD
KMNLVDVVQRIGIDHHFEEQIATALTSIYSTEFNSSSLHEVALRFRLLRQQGFWVSADEF
EKFKNEDGSFISGITNDPKGLLSLYNAAHLLTHDEEILEDAILFSRQHLELIRSSLKSPL
AEQVGRALEIPLPRTLKREETISFIPEYSIQDQTYSPVILELAKLDFNLLQHLHQKELKE
ISQWWKELSGEIGLDYVRDRIVECYFWSYTVHYEQENARARMILARLFLLTSLLDDTYDV
HATLEEARELNKAIERWDDNDVSLLPEYLKEFFVKVISNFREFEDELESHEKYRNVYNIK
GFQTLSKYYLQEAEWFHHGYTPSFKDQVNVSVITAGGQVLSIGLLVGMGHEATKEAFEWA
TGDTDAIWACGQVSRFMDDMSAFKNGRNNMDVASSVECYMKERNVPSEVALATISSFVED
AWKTINQAPFKYPTLLPVVQRVTSLAKSMTLLFLDKRDAYTYSKDFKTTLESHFVRHIPL

Transcript Sequence

Transcript ID

EES15026
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:55786888:55797691:-1 gene:SORBI_3007G133900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGGGAGCGGAGCCACTAGGTAGGAGGTAGGTAGCAGCAACAGTAGATCTGGCGACGGTG
GTAGCACGTGGAGCACGTGCAGTCTTCAAGTGTAGGGAAATCAAGCTGCAAAGCTGAAAA
TAAGTAGGGGCCAAGAATGAGTGCTTGAGGGATTTGAGGACCTCCTACTCTTGAGGACTT
GATTGAATAGCGCCCTGCTCGGGCAATTTAATTTTGATCTTTGCTGCTAGCCACATATGC
ATAATCTCTCCGCTGTGGCCAAATTTGGTCCCTTACCTTGGCCACCCATCATCTGCACTG
CTTGTCATGAGTGGTAGTGCCACTGTCCCTTTGTTTGAGAAAAATCATATTGTGGATAGT
TTAAGTTTACCTAGAAATTTCAAATTCGTTCACTTCCGCGTGGGCAAAGAATTGTGGTAC
CAAATGTGAGATTGGTAGCCATCGACATTGACATTTGTCTCAGGTAGGCTCCAACCTCGT
CAGTGTCAAGAATCTTTTTCGAAAGAGGGAAACACTGGGAATGCAACAGTTTGTCGATCA
TGAAGACCCTTAACAGCCTGCCTATAAATGTGCACGAACCTATTGCACGAGTACTGGACT
GAGAGAAACAAGAAATATATACATACATACACATGGCTACTACGGGCACAGCAATGCCAG
CACCTGTGTTTCACCCCACAGTATGGGGGGATTACTTTATCAAATTTGTCCCAGAGCAAT
TGCAGGTTTCAGATGAAAAGATGGCAGAGAGAATCAACCATTTAAAAGAGGAGGTAATTG
GTATGTTCCAGGCTTGCAAAAATGCTGTGGACAAAATGAACCTAGTAGATGTGGTGCAAC
GAATTGGAATAGATCACCATTTTGAGGAACAGATCGCAACTGCCTTAACCAGCATTTATA
GCACTGAATTCAATAGCTCAAGTCTACATGAGGTTGCCCTTCGGTTTCGCTTGCTTAGGC
AGCAAGGGTTTTGGGTTTCTGCAGATGAATTTGAAAAGTTCAAGAATGAAGATGGGAGCT
TTATCAGTGGTATAACCAATGACCCAAAGGGCTTGTTGAGTTTATACAATGCAGCTCACC
TTCTTACTCACGATGAGGAGATACTTGAAGATGCTATCTTATTTTCAAGGCAGCATCTGG
AATTAATAAGGAGTAGTCTCAAGTCCCCTTTAGCTGAACAAGTTGGTCGTGCCCTTGAAA
TACCATTGCCAAGAACCTTAAAGAGGGAGGAAACAATATCATTTATCCCAGAGTATAGCA
TACAAGATCAAACGTACAGCCCCGTGATATTGGAGCTTGCCAAACTAGATTTCAACCTTC
TGCAGCATCTCCATCAAAAAGAACTCAAGGAAATTTCTCAATGGTGGAAAGAGCTTTCGG
GAGAAATTGGACTGGACTATGTAAGGGATCGGATTGTCGAGTGTTACTTTTGGTCTTATA
CTGTGCACTATGAGCAAGAGAATGCACGTGCACGGATGATCCTCGCCAGGTTGTTCTTGT
TAACATCTTTGTTAGATGACACTTACGATGTGCATGCAACTTTGGAGGAGGCCCGGGAGC
TCAACAAAGCTATTGAAAGATGGGATGACAATGATGTTTCTCTTCTACCTGAGTACCTCA
AGGAATTCTTTGTCAAGGTGATAAGCAACTTCAGGGAGTTTGAGGATGAGTTGGAGTCAC
ATGAAAAGTACCGCAATGTTTACAATATTAAAGGGTTCCAAACATTATCCAAATATTATC
TCCAAGAAGCAGAATGGTTTCATCATGGCTACACTCCAAGCTTCAAAGATCAAGTGAATG
TTTCTGTCATAACAGCGGGTGGTCAAGTGTTAAGTATTGGTTTGCTTGTTGGCATGGGTC
ATGAAGCAACCAAAGAGGCATTCGAGTGGGCCACTGGTGACACTGATGCTATATGGGCTT
GTGGACAGGTGTCACGTTTCATGGATGACATGTCAGCTTTCAAGAATGGTAGAAACAACA
TGGATGTAGCTAGTTCTGTGGAGTGCTACATGAAGGAACGCAATGTCCCTAGTGAGGTTG
CCCTGGCAACGATAAGCTCCTTTGTTGAAGATGCATGGAAGACCATAAATCAAGCACCAT
TTAAGTATCCTACTCTATTACCGGTTGTGCAACGAGTTACGAGCCTAGCAAAGAGCATGA
CACTGTTGTTCCTTGACAAGAGGGATGCGTACACATACAGCAAGGACTTCAAAACGACAC
TGGAGAGCCATTTCGTCAGACATATTCCACTATAATATTAGAAAGCATAGTTAACGTCGA
CATATGCGTGTGTGCGTGAA