Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES14624
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:5813831:5819502:-1 gene:SORBI_3007G056500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACGGCGGCGGCGGCGGCCAGAAGAAGCGGGGCACGAGGATCGAGCCCTTCCGGCAC
CGCGTCGAGACCGACCCCAAGTTCTTCGACAAGTCGTGGCGGAAGCTCCATGACGCCATC
CGCGAGATCTACAACCACAACGCCAGCGGCCTCTCCTTCGAGGAGCTCTACAGGACTGCT
TATAACATGGTCCTGAACAAGTTTGCTCCTCAGCTCTATGAGAAACTCACAGAAAACATG
AAAGAACATCTTGAAGATATGCGCACATGTATAGATGCTGCTCAAGGTGGTTTGTTCCTG
GAAGAGTTGCAGCGAAAATGGAATGACCACAACAAGGCATTGACAATGATTAGAGACATC
CTGATGTATATGGACAGGACTTATATTCCTACTAACAAAAAGACACCTGTCTTTGATCAT
GGATTAGAGCTTTGGAGGGATACCATAGTCCGGTCTCCCACAATTCAGAGGAGGTTGTCT
GACACGCTTCTTGAACTCATACATAGTGAAAGGACAGGCGATGTGATTAATAGAGGCTTG
ATGAGGACTACAACAAAAATGTTGATGGATCTAGGGTTGTCTGTTTATCAGGATGATTTT
GAAAGGCCATTTCTTGAGGTTTCTGCTAGTTTCTATAGTGGTGAGTCACAACAATTCATT
GAGTGCTGTGCTTGTGGTGAGTATCTGAAGCAGGCTGAGAGGCGCCTCTCTGAAGAATCA
GAGCGTGTGTCCCAATACTTGGATGTCAAAACCCATGAGAAAATTACTGCTGTTGTGGTG
AATGAGATGCTCGCAAATCACATGCAGAGGTTGATTCTTATGGAGAACTCGGGGCTTGTG
AATATGCTTGTTGAAGACAGGTATGAAGACCTGACCAGGATGTACACTTTGTTTAATCAT
GTTCCTGATGGGCTCACAACAATCAGATCTGTTATGGCATCTCATATTAAGGATACTGGC
AAAAGTTTGGTAACAGATCCTGAGAGATTAAAGGACCCAGTTGATTTTGTTCAGCGGCTT
CTTAACATGAAGGATAAGTATGACAATATCATCAATGTGTCATTTAGCAATGACAAGAGT
TTCCTGAATGCTCTTAATTCCTCATTTGAGCACTTCATAAACTTAAACAACAGATCCCCT
GAGTTCATATCACTGTTTGTTGATGACAAATTGCGGAAGGGGGTGAAAGAGGCTAATGAG
GAAGATCTTGAAACTGTCCTGGACAAGGTGATGATGCTGTTTAGATATTTGCAAGAAAAA
GATCTATTTGAGAAATATTACAAGCAACACTTGGCAAAGCGTCTTCTTTCTGGGAAGAAT
GCTTCTGATGATTCTGAGAGAAGCATGCTTGTGAAGCTGAAGACAGAATGTGGCTACCAG
TTTACTTCGAAGTTGGAGGGCATGTTCAATGATTTGAAGACTTCTGAGGATACTACACAA
GGGTTTTATGCATCTACTTCCTCGGAGCTTCTGGCAGATGCCCCCACAATATCTGTCCAG
ATACTCACCACTGGGTCATGGCCAACACAAACCTGCAATACCTGCAACCTTCCCCCTGAA
ATTGTCCCTATCTCAGAGAAGTTTCGGGCTTATTACCTTGGCACACATAATGGCAGGAGG
CTAACATGGCAAACAAACATGGGGCATGCTGACATAAAAGCAACATTTGGAAATGGCAGC
AAGCATGAACTGAACGTCTCAACATACCAGATGTGTGTTCTGATGCTGTTTAACTCATCC
GATGTCTTGACTTACCGTGAAATTGAGCAGTCTACAGCAATACCAGCTACTGACCTGAAG
CGATGCCTCCAGTCGCTAGCTCTTGTGAAAGGTAAGCAAGTCCTGCGAAAAGAGCCCATG
AGCCGGGACATTGCCGATGATGACAGCTTCTTCGTGAACGACAAGTTCACCAGCAAGCTC
TTCAAGGTGAAGATTGGCACTGTGGCGGCGCAGAAGGAGACCGACCCTGAGAAGCTAGAG
ACACGGCAGCGGGTCGAGGAGGATAGGAAGCCGCAGATCGAGGCGGCCATTGTGCGGATC
ATGAAGTCGAGGAGGGTTCTAGACCACAACAGCATAATGATGGAGGTGACGAAGCAGTTG
CAGCCCCGTTTCATGCCAAACCCCGTGGTGATCAAGAAGCGGATTGAGTCGCTCATCGAG
CGCGAGTTCCTGGAGCGGGACAAGACGGACAGGAAGATGTACCGTTATCTCGCCTAA

Peptide Sequence

PEP ID

EES14624
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:5813831:5819502:-1 gene:SORBI_3007G056500 transcript:EES14624 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNGGGGGQKKRGTRIEPFRHRVETDPKFFDKSWRKLHDAIREIYNHNASGLSFEELYRTA
YNMVLNKFAPQLYEKLTENMKEHLEDMRTCIDAAQGGLFLEELQRKWNDHNKALTMIRDI
LMYMDRTYIPTNKKTPVFDHGLELWRDTIVRSPTIQRRLSDTLLELIHSERTGDVINRGL
MRTTTKMLMDLGLSVYQDDFERPFLEVSASFYSGESQQFIECCACGEYLKQAERRLSEES
ERVSQYLDVKTHEKITAVVVNEMLANHMQRLILMENSGLVNMLVEDRYEDLTRMYTLFNH
VPDGLTTIRSVMASHIKDTGKSLVTDPERLKDPVDFVQRLLNMKDKYDNIINVSFSNDKS
FLNALNSSFEHFINLNNRSPEFISLFVDDKLRKGVKEANEEDLETVLDKVMMLFRYLQEK
DLFEKYYKQHLAKRLLSGKNASDDSERSMLVKLKTECGYQFTSKLEGMFNDLKTSEDTTQ
GFYASTSSELLADAPTISVQILTTGSWPTQTCNTCNLPPEIVPISEKFRAYYLGTHNGRR
LTWQTNMGHADIKATFGNGSKHELNVSTYQMCVLMLFNSSDVLTYREIEQSTAIPATDLK
RCLQSLALVKGKQVLRKEPMSRDIADDDSFFVNDKFTSKLFKVKIGTVAAQKETDPEKLE
TRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIMMEVTKQLQPRFMPNPVVIKKRIESLIE
REFLERDKTDRKMYRYLA

Transcript Sequence

Transcript ID

EES14624
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:5813831:5819502:-1 gene:SORBI_3007G056500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCAACGAGAACATCGTTTCTGATCCCTTTCCAGCACCTCCCTCCCTTCGCAGCCACGCGA
CGACGAAACCCTAGCCTCCTCCTCCCCCCTCCCCCACCTCGTCGGAACCCCGGCGCCTCG
CCGGAGCACGGGGTCAACGCACCCCCGTCGGCCGCGGCTGCGGAGGAGCGGAGGAAGACG
ATGAACGGCGGCGGCGGCGGCCAGAAGAAGCGGGGCACGAGGATCGAGCCCTTCCGGCAC
CGCGTCGAGACCGACCCCAAGTTCTTCGACAAGTCGTGGCGGAAGCTCCATGACGCCATC
CGCGAGATCTACAACCACAACGCCAGCGGCCTCTCCTTCGAGGAGCTCTACAGGACTGCT
TATAACATGGTCCTGAACAAGTTTGCTCCTCAGCTCTATGAGAAACTCACAGAAAACATG
AAAGAACATCTTGAAGATATGCGCACATGTATAGATGCTGCTCAAGGTGGTTTGTTCCTG
GAAGAGTTGCAGCGAAAATGGAATGACCACAACAAGGCATTGACAATGATTAGAGACATC
CTGATGTATATGGACAGGACTTATATTCCTACTAACAAAAAGACACCTGTCTTTGATCAT
GGATTAGAGCTTTGGAGGGATACCATAGTCCGGTCTCCCACAATTCAGAGGAGGTTGTCT
GACACGCTTCTTGAACTCATACATAGTGAAAGGACAGGCGATGTGATTAATAGAGGCTTG
ATGAGGACTACAACAAAAATGTTGATGGATCTAGGGTTGTCTGTTTATCAGGATGATTTT
GAAAGGCCATTTCTTGAGGTTTCTGCTAGTTTCTATAGTGGTGAGTCACAACAATTCATT
GAGTGCTGTGCTTGTGGTGAGTATCTGAAGCAGGCTGAGAGGCGCCTCTCTGAAGAATCA
GAGCGTGTGTCCCAATACTTGGATGTCAAAACCCATGAGAAAATTACTGCTGTTGTGGTG
AATGAGATGCTCGCAAATCACATGCAGAGGTTGATTCTTATGGAGAACTCGGGGCTTGTG
AATATGCTTGTTGAAGACAGGTATGAAGACCTGACCAGGATGTACACTTTGTTTAATCAT
GTTCCTGATGGGCTCACAACAATCAGATCTGTTATGGCATCTCATATTAAGGATACTGGC
AAAAGTTTGGTAACAGATCCTGAGAGATTAAAGGACCCAGTTGATTTTGTTCAGCGGCTT
CTTAACATGAAGGATAAGTATGACAATATCATCAATGTGTCATTTAGCAATGACAAGAGT
TTCCTGAATGCTCTTAATTCCTCATTTGAGCACTTCATAAACTTAAACAACAGATCCCCT
GAGTTCATATCACTGTTTGTTGATGACAAATTGCGGAAGGGGGTGAAAGAGGCTAATGAG
GAAGATCTTGAAACTGTCCTGGACAAGGTGATGATGCTGTTTAGATATTTGCAAGAAAAA
GATCTATTTGAGAAATATTACAAGCAACACTTGGCAAAGCGTCTTCTTTCTGGGAAGAAT
GCTTCTGATGATTCTGAGAGAAGCATGCTTGTGAAGCTGAAGACAGAATGTGGCTACCAG
TTTACTTCGAAGTTGGAGGGCATGTTCAATGATTTGAAGACTTCTGAGGATACTACACAA
GGGTTTTATGCATCTACTTCCTCGGAGCTTCTGGCAGATGCCCCCACAATATCTGTCCAG
ATACTCACCACTGGGTCATGGCCAACACAAACCTGCAATACCTGCAACCTTCCCCCTGAA
ATTGTCCCTATCTCAGAGAAGTTTCGGGCTTATTACCTTGGCACACATAATGGCAGGAGG
CTAACATGGCAAACAAACATGGGGCATGCTGACATAAAAGCAACATTTGGAAATGGCAGC
AAGCATGAACTGAACGTCTCAACATACCAGATGTGTGTTCTGATGCTGTTTAACTCATCC
GATGTCTTGACTTACCGTGAAATTGAGCAGTCTACAGCAATACCAGCTACTGACCTGAAG
CGATGCCTCCAGTCGCTAGCTCTTGTGAAAGGTAAGCAAGTCCTGCGAAAAGAGCCCATG
AGCCGGGACATTGCCGATGATGACAGCTTCTTCGTGAACGACAAGTTCACCAGCAAGCTC
TTCAAGGTGAAGATTGGCACTGTGGCGGCGCAGAAGGAGACCGACCCTGAGAAGCTAGAG
ACACGGCAGCGGGTCGAGGAGGATAGGAAGCCGCAGATCGAGGCGGCCATTGTGCGGATC
ATGAAGTCGAGGAGGGTTCTAGACCACAACAGCATAATGATGGAGGTGACGAAGCAGTTG
CAGCCCCGTTTCATGCCAAACCCCGTGGTGATCAAGAAGCGGATTGAGTCGCTCATCGAG
CGCGAGTTCCTGGAGCGGGACAAGACGGACAGGAAGATGTACCGTTATCTCGCCTAAAAA
CAACCTCCCCTGTCTTTGGAATTTAATTTCATTATATGCTACCCGTATCATATAAACAGA
CCTTGATCCATGTACTTATGCATAGAAGGAAATGGGTCTCTGCATCCCGTGATACTTTTA
GTTGAAACTGGTTTTTGCTGGGTTTGTCCAGTTAGTTGCTAGCTTAGCTTCTATAACATC
TTGCGCTGGGATACATGCTAATGCTATAGAATATGATCTTGCTGGCTGCGAAGCAATGCT
CTCTTTTTGGTTGCTGCTTCAGAAAGGCGATCTGGTTGCTGTCAAGGTATCAAGGTTGAC
CTTTTGTGGCTTGATGGATGATTGGATGTCACTGAAATGATGCTAGGATGATATTCTACA
AAATTGTGCTATCGTTTGCAATGCTATGAGGTGCGTGGCTTCCAGAAGTGTGCTGCATGT
CACATGGTGGCATTGCTATGACAGTTGGTTTGTCCTGGATTGCGATTTATGACCAAAAAG
TTGCTGGTGCTTCAGCGTAAAGCCTCCTTAATTTTGTTGATCGTATATTTGACTTGTCAT
TTGTTAAATTTTGAGTAGAGATTATGGTCATAATTTGTCAAGATTTGAGAAGAGATTATG
GTCGGGTAATCGGGGATGATTTGTCATGGTATCAAATTTATATTGGGCCCCAAAATGGAA
CGGGGATGTGAGGAATGGCTCCGTTTCAACTCGATGGACAGATAAGCAAATTCTTTTGTT
ACCTTGTACTATTATATATGGAGGCCAGATCCATTTGGTGATTAATTTGTTTCATTTGAT
GTGCTGCTAATATATGTTGTAGCCAGCTCAGGTATGCACAAATAGAGCACGACGACAAGT
ATTTGAAGTCGCAGTGCATCCACAGCACAGATGTTGCCATCGCTTTCAGTCTCTCCTGAA
CCATCGTGACACCACGCGTCCATGCCCGCCGACCCAATCATGCATTGCTGCTCACCCAGG
GCGGCATGGACACACGATGGTGAGCTCCAAGAGCAGCGTTCGATCGTCTTCGGCTTCGGC
GACGGCGAGCGCAAGTGCG