Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES14499
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:2725590:2728134:-1 gene:SORBI_3007G029900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCCATTTGTTCTCTCCATCCTCATATGCTCATGGATCTTTGTTGTAGTGTACTGG
AGAAGGCTGAATAGCATGAGGCTAAGGCTTCCACCTGGACCTCCAACATGGCCAATCTTT
GGCAATCTTCTCCAGTTGAGCCCGCTTCCCCACAAAGACTTTGCCCGATTTTGCACCAAA
TATGGCCCTCTTGTCTATCTTCGCCTAGGAACCATCGATGCCATCACCACTGATGATCCT
GAAGTCATCCGTGAAATACTCATCCGGCAAGATGAGGTCTTTGCTTCACGGCCTCGGACA
CTGGCTGCTGTCCATCTTGCCTATGGGTGTGGCGATGTGGCTCTAGCTCCGCTGGGGCCT
AACTGGAAAAGGATGAGGAGAGTTTGTATGGAGCACTTGCTGACGACCAAGCGGCTCGAG
TCTTTTGCTGCTCACCGAGCTCAAGAGGCTGAGCACCTCTGTCAGTTTGTATGGGCTAAA
TCTCACTCTGGGAAGCCCGTGAACCTCAGAGAGGTTCTTGGTGCCTTCTCTATGAACAAC
GTCACGAGGATGCTGCTAGGGAAGCAGTACTTTGGGATCCAGTCCGCAGGCCCTGGCGAA
GCGATGGAGTTCATGCACATCACCCATGAGCTGTTCTTCCTGCTCGGCCTGATCTATCTT
GGGGACTACCTGCCAGCTTGGAGGTGGGTCGACCCGTATGGGTGCGAGAAGAAGATGAGG
GACGTCGAGAAGAAGGTGGACGACTTCCACCAGAAGATAATTGATGAACACAGGAGAGCC
AGGGAGGCCAAGAAGACTCGGCGTTCCTCCCTTGATGACGACGACGGCAAAGAAGACATG
GACTTCGTCGATGTGCTGCTATCTTTGCCTGGTGAGAACGGCAAGGAGCACATGGACGAC
ATGGAGATCAAAGCGTTGATGCAGGACATGATTGCTGCTGCTACGGACACTTCATCGGTG
ACCAACGAGTGGGTGATGGCAGAGGTGATCAAGAACCCACGCGTGCTCCGGCGTGTCCAG
GAGGAGCTTGACGCGGTGATCGGGCGCGACCGGATGGTGGCGGAGTCGGACCTCACCCAC
CTCCCCTACCTCCGGTGCGTGGTCCGGGAGTCGTTCCGGATGCACCCGGCGGGGCCGTTC
CTGATCCCGCACGAGTCCCTGAAGCCGACGACGATCATGGGGTACCACGTCCCGGCGCGC
ACGCGGGTGTTCATCAACACGCACGCGCTCGGCCGGAACCCTCGCGTGTGGGACGACGTC
GACGCGTTCCGGCCGGAGCGGCACCTGCCGGCGGAGGAGGGGGCGCGGGTGGAGATCAGC
CACCTGCCGGACTTCAAGATCCTGCCGTTCAGCGCCGGGAAGCGCAAGTGCCCCGGCGCG
CCGCTGGGCGTGGCGCTGGTGCTCATGGCGCTCGCCAGGCTCTTCCACTGCTTCGACTGG
TCCCCGCCCGACGGCCTCCGCCCCGAGGACGTCGACACCCAGGAGGTGTACGGGATGACC
ATGCCCAAGGCCACGCCGCTCGTCGCCGTCGCCACGCCACGCCTGCCGCCGCACTTGTAC
GGCGGCGGCTCGGCTTCTTAA

Peptide Sequence

PEP ID

EES14499
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:2725590:2728134:-1 gene:SORBI_3007G029900 transcript:EES14499 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPFVLSILICSWIFVVVYWRRLNSMRLRLPPGPPTWPIFGNLLQLSPLPHKDFARFCTK
YGPLVYLRLGTIDAITTDDPEVIREILIRQDEVFASRPRTLAAVHLAYGCGDVALAPLGP
NWKRMRRVCMEHLLTTKRLESFAAHRAQEAEHLCQFVWAKSHSGKPVNLREVLGAFSMNN
VTRMLLGKQYFGIQSAGPGEAMEFMHITHELFFLLGLIYLGDYLPAWRWVDPYGCEKKMR
DVEKKVDDFHQKIIDEHRRAREAKKTRRSSLDDDDGKEDMDFVDVLLSLPGENGKEHMDD
MEIKALMQDMIAAATDTSSVTNEWVMAEVIKNPRVLRRVQEELDAVIGRDRMVAESDLTH
LPYLRCVVRESFRMHPAGPFLIPHESLKPTTIMGYHVPARTRVFINTHALGRNPRVWDDV
DAFRPERHLPAEEGARVEISHLPDFKILPFSAGKRKCPGAPLGVALVLMALARLFHCFDW
SPPDGLRPEDVDTQEVYGMTMPKATPLVAVATPRLPPHLYGGGSAS

Transcript Sequence

Transcript ID

EES14499
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:2725590:2728134:-1 gene:SORBI_3007G029900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GATAGAGAAGAGTCACTGAGTGAGGTAATCTTTATGCGCATTCATTCATTTTGATGAGAC
AACCATACCAAGGTGAATTGGGTGACCACTAGGCTTTTCTTTTAGCAATAGAAGCTTCCA
AGTAATTCATGGAGGTCTGGATGTTCTCCTCAAGAAAAATAGGTATTCTGTGCCTTTGTT
ATAGATGTGGCAGGTGGAGTAGGACTATGGTAAACAAGGTTTTTCTTTTTTTTTTTTGGT
TGAGCAAATTGCAGATTAGTGGGGAAAAGAGCCTAATTATGGAAACACAACATCAGCTTG
CTCTTTGAATAAATGGTCATGTTTCATGAGCTTTCTTATTCTAGTCCTCTTCTATTTTTT
TTCTTAGCATTTTTCCAGTGATCTACAGTCTACTTGTGCCAGTCATGTCAAGATCATGAC
AGATTTTATATGCATGGTGGTAGGTGAGATGCTTAACCATACACATCAACACAAGAATCA
TGACCAATCCAATACTGTAACCAATTCGCTTCAACCCCAGTCGCTCAATTTACTTTGTAC
TTATACCAGGAAGCTTGACACATCCCATAAATAGGCCGACATTTGCAACTCAACTTTAGC
TGCCATCTGTTTCTGAACCATGGATCCATTTGTTCTCTCCATCCTCATATGCTCATGGAT
CTTTGTTGTAGTGTACTGGAGAAGGCTGAATAGCATGAGGCTAAGGCTTCCACCTGGACC
TCCAACATGGCCAATCTTTGGCAATCTTCTCCAGTTGAGCCCGCTTCCCCACAAAGACTT
TGCCCGATTTTGCACCAAATATGGCCCTCTTGTCTATCTTCGCCTAGGAACCATCGATGC
CATCACCACTGATGATCCTGAAGTCATCCGTGAAATACTCATCCGGCAAGATGAGGTCTT
TGCTTCACGGCCTCGGACACTGGCTGCTGTCCATCTTGCCTATGGGTGTGGCGATGTGGC
TCTAGCTCCGCTGGGGCCTAACTGGAAAAGGATGAGGAGAGTTTGTATGGAGCACTTGCT
GACGACCAAGCGGCTCGAGTCTTTTGCTGCTCACCGAGCTCAAGAGGCTGAGCACCTCTG
TCAGTTTGTATGGGCTAAATCTCACTCTGGGAAGCCCGTGAACCTCAGAGAGGTTCTTGG
TGCCTTCTCTATGAACAACGTCACGAGGATGCTGCTAGGGAAGCAGTACTTTGGGATCCA
GTCCGCAGGCCCTGGCGAAGCGATGGAGTTCATGCACATCACCCATGAGCTGTTCTTCCT
GCTCGGCCTGATCTATCTTGGGGACTACCTGCCAGCTTGGAGGTGGGTCGACCCGTATGG
GTGCGAGAAGAAGATGAGGGACGTCGAGAAGAAGGTGGACGACTTCCACCAGAAGATAAT
TGATGAACACAGGAGAGCCAGGGAGGCCAAGAAGACTCGGCGTTCCTCCCTTGATGACGA
CGACGGCAAAGAAGACATGGACTTCGTCGATGTGCTGCTATCTTTGCCTGGTGAGAACGG
CAAGGAGCACATGGACGACATGGAGATCAAAGCGTTGATGCAGGACATGATTGCTGCTGC
TACGGACACTTCATCGGTGACCAACGAGTGGGTGATGGCAGAGGTGATCAAGAACCCACG
CGTGCTCCGGCGTGTCCAGGAGGAGCTTGACGCGGTGATCGGGCGCGACCGGATGGTGGC
GGAGTCGGACCTCACCCACCTCCCCTACCTCCGGTGCGTGGTCCGGGAGTCGTTCCGGAT
GCACCCGGCGGGGCCGTTCCTGATCCCGCACGAGTCCCTGAAGCCGACGACGATCATGGG
GTACCACGTCCCGGCGCGCACGCGGGTGTTCATCAACACGCACGCGCTCGGCCGGAACCC
TCGCGTGTGGGACGACGTCGACGCGTTCCGGCCGGAGCGGCACCTGCCGGCGGAGGAGGG
GGCGCGGGTGGAGATCAGCCACCTGCCGGACTTCAAGATCCTGCCGTTCAGCGCCGGGAA
GCGCAAGTGCCCCGGCGCGCCGCTGGGCGTGGCGCTGGTGCTCATGGCGCTCGCCAGGCT
CTTCCACTGCTTCGACTGGTCCCCGCCCGACGGCCTCCGCCCCGAGGACGTCGACACCCA
GGAGGTGTACGGGATGACCATGCCCAAGGCCACGCCGCTCGTCGCCGTCGCCACGCCACG
CCTGCCGCCGCACTTGTACGGCGGCGGCTCGGCTTCTTAATTATTAGTTTGACGCACGCT
GCCCTGCCAGTCCCAGTCGTGGCGGCAAGCAAACTAAATCCATGGTGATCGGTGCATCTT
TGGTCGTCGCGCGCCATGGTTAAGGCTAACTGGCGTGTGACAGAGAAAGAAGCAGCGAGA
CGATCCTGTAGCTATTACTACACGCATGATGTTCCATATCAAACGATGAATGAAATTAAT
GAACTTCTCTGGTTTGAATTA