Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES13267
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:1815408:1821577:1 gene:SORBI_3007G019300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTCGGACTTCAGGCGAGCGGCGCGGCGGCCTCGTGGGTGGTGGGGCGGATGGGCACC
GACGCCCACCTCTACGATGACCCCGACGACGCCTCCATCCCCGAGCTCCTCGACTCCCGC
TTCGATGCTGACAAGGTCGACGCCCTCAAGCGCCTCCTTGCCCTCATCGCCCAGGGCGTC
GACGTCGCACACCTCTTCCCGCAGGTTGTCAAGAATGTGGCGTCGCAGTCGCTCGAGGTC
AAGAAGCTCGTCTACCTCTACCTCCTTCACTACGCCGACAAGCGCCAAAACGAAGCCCTT
CTTTCTATTAACATTTTCCAGAAGGATTTATCAGATATAAACCCATTGGTGAGGGCTTGG
GCCCTGCGCACTATGGCTGGCATTAGACTACATGTTGTTGCTCCGCTTGTGTTGGTTGCT
ATCAAGAAATGTGCCAGGGATCCATCTGCATATGTAAGGAAATGTGCCGCCTATGCGCTT
TGCAAGCTGTGTGACTTGCTTCCAGATGAAAGCACAGCTTTGGAGGAGATCGTGGACATC
TTGTTCAACGACAATTCCCCTGGAGTAGTCGGAGCTGCCGCTGTTGCATTTAAGTCAGTC
TGTCCAAGTTGTTTAGAGTTAGTATCAAAACATTTCCGAAGGCTATGTGAGACACTCCCA
GATATCGAGGAATGGACTCAAATTGTCCTCATTGAGATCCTCTTGCGTTATGTAATAGCC
AGACACGGGTTGGTCAAGGATTCTTTACTCTTTGCTTCAGATTTACCGACGGAGACTCAG
GGCGTTACAGATTCGGATGCTGTTGCTAGCGTGCCCATCCAACCTGATTCTATCAGCAAT
GGGGTTTCTGATACTATATCAAGCATCATGCTGTTCCGGCACTACATCGAGCAATGCTCA
GGTCCCTCTGATAGAGAAGGCAATAATTTAAAATTTTCATCTGTCACCACAAACAGCAAT
GATGATGTTGCAATTCTTTTGAAATGTACATCGCCTCTTCTATGGAGTAGAAATAGTGGA
GTTGTACTTGCAGCAGCAAGTGTGCATTGGATCATGGCTCCTATTGGGGACGTTAAGAGA
ATTGTTGGCCCAATTTTGTTTACTCTACGGTCATCTCCTGATGCAGCATATGTGATGCTT
GGCAACATATTAGTTTTTGCCAAGACAATGCCATCATTGTTTGCCCCATTTTATGAGGAC
TTCTTTGTAAATGCTTCAGATCCGTACCAGACGAGGGCTTTGAAGCTTGAAATACTGACC
TCTATTGCCACAGAGCAATCTATTCCGGCCATTTTTGAAGAATTTCAGGATTACATTAAA
GATCCAGATAGGAAATTTGTAGCAGATACCGTTGCAGCTATTGCATTGTGTGCCCAGAAA
CTTCCCTCTATTGCCACCGCTTGCCTTGAGGGACTTTTGACACTTGTATTTTATGAATCG
TTTATTAGTAACTCGGTTCACTTAGATGGAGAAAATGCTGTTTTGGTTCAAGCAATCTTG
TCAATCAAAGCAATAGTGAAAATGGATCCAGTATCCCACGAAAAGGTAATTGTCCGCTTG
GTTCGTTGTTTTGACAAAATCAAGGATCCTGCAGCACGATCCTTGATCGTTTGGGTGTTT
GGAGAGTATAGCTTCATGGGTGATCTCACTACAAAGATAGTTCCTCCTGTTCTCAAGTAT
CTCGCATGGTCCTTCTCTGCTGAAGTGGTGGAAACGAAGCTTCAAATCCTAAATTCTTCT
GCCAAGGTTATAATGCGCTGTACAGAAGAACACATGGAAGAATTCAAAAGGATAGTTGCG
TATGTCATTGAGTTGGCTACATGTGACTTGAATTATGATGTTCGTGATCGTGCTCGTTTA
CTATCAAGACTTTTGCCATGCTACATGACTCACCAAGGGCCCTCACATCAACCTCAGAAT
GGTGATATCTATAAAGAGCTAGCCGATCATATATTTAATGGGAAGTTGCAGCCAACATCT
CATTCAGCAAGCAACTATCGCATATATCTTCCAGGTTCCCTTTCACAGGTTGTTCTTCAT
GCAGCCCCTGGTTATGCACCACTTCCAAAGCCTCAAAGTATGGAATTAAACCATAATGTC
TCGGAAGCAACCAGAGGCAAGGCCAAACTTTCTGGAAGTAATAACTCCGGTGCTGAATCT
GTAACTTCAGCATATGAGAGCAGCTCTGTTTATGATTCGGAGAGTGAAGGTGCTGACCTA
TCAGACAGAGATACTTTTGAATCCCATCAGGATCAAGAAGATAACCAGGATGCTCCACTG
GTACAGATATATGATGCTAGTATACAGCAAGGCCAGACAGGTCAAAATACTGAGGAAAAT
TTGGCAGATCTCATCTCTACTGATTTGACTGAGTTGATGTCTAAGTCAGCCTTGGAATCA
TGGCTTGATGAGGCTCCTCCTGAGCCAGTTGTTCAGAATTTGACACAGACATCATCTGCC
AGAGTTTCTTTTACAAACCTCAACTTTGAGCGAAAACCTAAATTACACACATTGTTAGAC
TCATCTGGCAGTAATGGCTTAAGTGCTCTATATGCCTTCTCGTCTGAGGTTTCACCCAGA
TCACGCTTGCTAGTATGTGTGGACTTATATTTTGAGAATGTCACTACACAACAGCTAACA
GATATAACCATTGAAGCTGAAGAGGCTTCTAGCAGTGTGGATTCTATAGACCAAACATCA
GAAGGATCTTCGGGTGTCCCTACTATCGTTCCTTTGGAAGAGATACATTCATTGGCTCCA
CAACAAATGGCAAAGATGGTTCTTCAGGTCCATTTTCATCACCATCTCTTGCCTCTAAAG
CTGTCTGTGCTTTGCAATGGGAAACGGCATCCAGCAAAGCTTCATCCTGACATTGCTTAT
TTTGTTCGGCCCCTACCCATGGACTTAAATACTTTCCTATGCAAGGAAAACCAATTGAGG
GGAATGTTTGAGTATGCTAGGAGGTGCACCTTCAAAGATCATCTTCAGAAGCTAGAGCAC
GAGGACAGTGCAGAGCACAGCGATAAGAACCTTCAGGTGGCCCAGAGTGTTGCTTCAAAG
ATACTGAGCAATGCTAATGTTCACCTTGTCTCAATGGATATGCCAGTAACCTTCAGTGTT
GATGATGCCTCTGGCTTGTGTTGGAGATTCAGCAGTGAAATCCTGAGCACTTCAAAACCT
TGCCTGATTACCATCCTCGCGGAAGGGCATGCCTCAGGTCCACTGGATCTTACTGTCAAG
GTGAACTCTGAAGATACGGTGTTTGCCCTGAACCTCCTGAACAGAGTTGTAGTGATCATA
GATTGA

Peptide Sequence

PEP ID

EES13267
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:1815408:1821577:1 gene:SORBI_3007G019300 transcript:EES13267 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MFGLQASGAAASWVVGRMGTDAHLYDDPDDASIPELLDSRFDADKVDALKRLLALIAQGV
DVAHLFPQVVKNVASQSLEVKKLVYLYLLHYADKRQNEALLSINIFQKDLSDINPLVRAW
ALRTMAGIRLHVVAPLVLVAIKKCARDPSAYVRKCAAYALCKLCDLLPDESTALEEIVDI
LFNDNSPGVVGAAAVAFKSVCPSCLELVSKHFRRLCETLPDIEEWTQIVLIEILLRYVIA
RHGLVKDSLLFASDLPTETQGVTDSDAVASVPIQPDSISNGVSDTISSIMLFRHYIEQCS
GPSDREGNNLKFSSVTTNSNDDVAILLKCTSPLLWSRNSGVVLAAASVHWIMAPIGDVKR
IVGPILFTLRSSPDAAYVMLGNILVFAKTMPSLFAPFYEDFFVNASDPYQTRALKLEILT
SIATEQSIPAIFEEFQDYIKDPDRKFVADTVAAIALCAQKLPSIATACLEGLLTLVFYES
FISNSVHLDGENAVLVQAILSIKAIVKMDPVSHEKVIVRLVRCFDKIKDPAARSLIVWVF
GEYSFMGDLTTKIVPPVLKYLAWSFSAEVVETKLQILNSSAKVIMRCTEEHMEEFKRIVA
YVIELATCDLNYDVRDRARLLSRLLPCYMTHQGPSHQPQNGDIYKELADHIFNGKLQPTS
HSASNYRIYLPGSLSQVVLHAAPGYAPLPKPQSMELNHNVSEATRGKAKLSGSNNSGAES
VTSAYESSSVYDSESEGADLSDRDTFESHQDQEDNQDAPLVQIYDASIQQGQTGQNTEEN
LADLISTDLTELMSKSALESWLDEAPPEPVVQNLTQTSSARVSFTNLNFERKPKLHTLLD
SSGSNGLSALYAFSSEVSPRSRLLVCVDLYFENVTTQQLTDITIEAEEASSSVDSIDQTS
EGSSGVPTIVPLEEIHSLAPQQMAKMVLQVHFHHHLLPLKLSVLCNGKRHPAKLHPDIAY
FVRPLPMDLNTFLCKENQLRGMFEYARRCTFKDHLQKLEHEDSAEHSDKNLQVAQSVASK
ILSNANVHLVSMDMPVTFSVDDASGLCWRFSSEILSTSKPCLITILAEGHASGPLDLTVK
VNSEDTVFALNLLNRVVVIID

Transcript Sequence

Transcript ID

EES13267
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:1815408:1821577:1 gene:SORBI_3007G019300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGACACTGCTATTGTGGCCCAGCAGCGCCTATCTGGTTCGTGACTCTTTTCTTCCTCTC
CTCCGGCGGGGCCCCGGCGACAAACTAGCTAACGGCGGCGAGATCCAGATCCACCGCACC
GGACCCGGACCCGGACCCGCCCGCCCCGCAGGAACAGGATGTTCGGACTTCAGGCGAGCG
GCGCGGCGGCCTCGTGGGTGGTGGGGCGGATGGGCACCGACGCCCACCTCTACGATGACC
CCGACGACGCCTCCATCCCCGAGCTCCTCGACTCCCGCTTCGATGCTGACAAGGTCGACG
CCCTCAAGCGCCTCCTTGCCCTCATCGCCCAGGGCGTCGACGTCGCACACCTCTTCCCGC
AGGTTGTCAAGAATGTGGCGTCGCAGTCGCTCGAGGTCAAGAAGCTCGTCTACCTCTACC
TCCTTCACTACGCCGACAAGCGCCAAAACGAAGCCCTTCTTTCTATTAACATTTTCCAGA
AGGATTTATCAGATATAAACCCATTGGTGAGGGCTTGGGCCCTGCGCACTATGGCTGGCA
TTAGACTACATGTTGTTGCTCCGCTTGTGTTGGTTGCTATCAAGAAATGTGCCAGGGATC
CATCTGCATATGTAAGGAAATGTGCCGCCTATGCGCTTTGCAAGCTGTGTGACTTGCTTC
CAGATGAAAGCACAGCTTTGGAGGAGATCGTGGACATCTTGTTCAACGACAATTCCCCTG
GAGTAGTCGGAGCTGCCGCTGTTGCATTTAAGTCAGTCTGTCCAAGTTGTTTAGAGTTAG
TATCAAAACATTTCCGAAGGCTATGTGAGACACTCCCAGATATCGAGGAATGGACTCAAA
TTGTCCTCATTGAGATCCTCTTGCGTTATGTAATAGCCAGACACGGGTTGGTCAAGGATT
CTTTACTCTTTGCTTCAGATTTACCGACGGAGACTCAGGGCGTTACAGATTCGGATGCTG
TTGCTAGCGTGCCCATCCAACCTGATTCTATCAGCAATGGGGTTTCTGATACTATATCAA
GCATCATGCTGTTCCGGCACTACATCGAGCAATGCTCAGGTCCCTCTGATAGAGAAGGCA
ATAATTTAAAATTTTCATCTGTCACCACAAACAGCAATGATGATGTTGCAATTCTTTTGA
AATGTACATCGCCTCTTCTATGGAGTAGAAATAGTGGAGTTGTACTTGCAGCAGCAAGTG
TGCATTGGATCATGGCTCCTATTGGGGACGTTAAGAGAATTGTTGGCCCAATTTTGTTTA
CTCTACGGTCATCTCCTGATGCAGCATATGTGATGCTTGGCAACATATTAGTTTTTGCCA
AGACAATGCCATCATTGTTTGCCCCATTTTATGAGGACTTCTTTGTAAATGCTTCAGATC
CGTACCAGACGAGGGCTTTGAAGCTTGAAATACTGACCTCTATTGCCACAGAGCAATCTA
TTCCGGCCATTTTTGAAGAATTTCAGGATTACATTAAAGATCCAGATAGGAAATTTGTAG
CAGATACCGTTGCAGCTATTGCATTGTGTGCCCAGAAACTTCCCTCTATTGCCACCGCTT
GCCTTGAGGGACTTTTGACACTTGTATTTTATGAATCGTTTATTAGTAACTCGGTTCACT
TAGATGGAGAAAATGCTGTTTTGGTTCAAGCAATCTTGTCAATCAAAGCAATAGTGAAAA
TGGATCCAGTATCCCACGAAAAGGTAATTGTCCGCTTGGTTCGTTGTTTTGACAAAATCA
AGGATCCTGCAGCACGATCCTTGATCGTTTGGGTGTTTGGAGAGTATAGCTTCATGGGTG
ATCTCACTACAAAGATAGTTCCTCCTGTTCTCAAGTATCTCGCATGGTCCTTCTCTGCTG
AAGTGGTGGAAACGAAGCTTCAAATCCTAAATTCTTCTGCCAAGGTTATAATGCGCTGTA
CAGAAGAACACATGGAAGAATTCAAAAGGATAGTTGCGTATGTCATTGAGTTGGCTACAT
GTGACTTGAATTATGATGTTCGTGATCGTGCTCGTTTACTATCAAGACTTTTGCCATGCT
ACATGACTCACCAAGGGCCCTCACATCAACCTCAGAATGGTGATATCTATAAAGAGCTAG
CCGATCATATATTTAATGGGAAGTTGCAGCCAACATCTCATTCAGCAAGCAACTATCGCA
TATATCTTCCAGGTTCCCTTTCACAGGTTGTTCTTCATGCAGCCCCTGGTTATGCACCAC
TTCCAAAGCCTCAAAGTATGGAATTAAACCATAATGTCTCGGAAGCAACCAGAGGCAAGG
CCAAACTTTCTGGAAGTAATAACTCCGGTGCTGAATCTGTAACTTCAGCATATGAGAGCA
GCTCTGTTTATGATTCGGAGAGTGAAGGTGCTGACCTATCAGACAGAGATACTTTTGAAT
CCCATCAGGATCAAGAAGATAACCAGGATGCTCCACTGGTACAGATATATGATGCTAGTA
TACAGCAAGGCCAGACAGGTCAAAATACTGAGGAAAATTTGGCAGATCTCATCTCTACTG
ATTTGACTGAGTTGATGTCTAAGTCAGCCTTGGAATCATGGCTTGATGAGGCTCCTCCTG
AGCCAGTTGTTCAGAATTTGACACAGACATCATCTGCCAGAGTTTCTTTTACAAACCTCA
ACTTTGAGCGAAAACCTAAATTACACACATTGTTAGACTCATCTGGCAGTAATGGCTTAA
GTGCTCTATATGCCTTCTCGTCTGAGGTTTCACCCAGATCACGCTTGCTAGTATGTGTGG
ACTTATATTTTGAGAATGTCACTACACAACAGCTAACAGATATAACCATTGAAGCTGAAG
AGGCTTCTAGCAGTGTGGATTCTATAGACCAAACATCAGAAGGATCTTCGGGTGTCCCTA
CTATCGTTCCTTTGGAAGAGATACATTCATTGGCTCCACAACAAATGGCAAAGATGGTTC
TTCAGGTCCATTTTCATCACCATCTCTTGCCTCTAAAGCTGTCTGTGCTTTGCAATGGGA
AACGGCATCCAGCAAAGCTTCATCCTGACATTGCTTATTTTGTTCGGCCCCTACCCATGG
ACTTAAATACTTTCCTATGCAAGGAAAACCAATTGAGGGGAATGTTTGAGTATGCTAGGA
GGTGCACCTTCAAAGATCATCTTCAGAAGCTAGAGCACGAGGACAGTGCAGAGCACAGCG
ATAAGAACCTTCAGGTGGCCCAGAGTGTTGCTTCAAAGATACTGAGCAATGCTAATGTTC
ACCTTGTCTCAATGGATATGCCAGTAACCTTCAGTGTTGATGATGCCTCTGGCTTGTGTT
GGAGATTCAGCAGTGAAATCCTGAGCACTTCAAAACCTTGCCTGATTACCATCCTCGCGG
AAGGGCATGCCTCAGGTCCACTGGATCTTACTGTCAAGGTGAACTCTGAAGATACGGTGT
TTGCCCTGAACCTCCTGAACAGAGTTGTAGTGATCATAGATTGAGGTGTCAAGTTTTTAG
TTTTTGCATTCAGTTTAAGATATCACGTGGATACTGTAAATTGTACATTATCAGCAAATG
AAAAGGGTATTTGAAGCACGTGACTGTTTGTAAGAAAGATTGTTGAATATTGCAACTCCA
ATAGTTCCAAAAAAAAAGAATTGATAAATGAATGAGCTTTATT