Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES13248
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:1312378:1314845:1 gene:SORBI_3007G015100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGCTGATCAGGCCATGCATGCAGGCAGCAACCATGCAAGTCCTCCAGTTGCTGCTC
CCATTGTTGTTGGCTCTGGCGCCGGTGTCCATCCTGCTCGTCGTCCGGCGTGCAACGCCG
CCGCCGATCAAAGCACGCCTGGCCACCCTCAAATCTGCCATAGCACGTGCACGTAAGCCA
ATTATCTTCGTCACCGACTTCGCCACGGCGCATCACCTGCTCGTGCGGGGCAGCAGATCA
ACAACCGCCGCCGCCGCCGGCGGCGGCTCTTTCTCCAACCGCCCGCCGTCTATGGCACCC
AGCGCCGTCCTCTCGGGCCGCCGCTACCACAACATCAACTCGGCACCCTACGGCCAGCTC
TGGCGCGCCCTCCGCTACAACCTCACCTCGGGTGTCCTCCACCCGACGCACCTGCACCGC
TACGCGGCCGCAAGGCGCCACGCGCTACGCGGCCTCGTGGCGGACCTCAGCGAGCAGCAG
CAGGTCGCCGCCGGCGTGGTGCTCGCCGCGGAGAGCATCCGCAGCGCCGTGTTTGGCCTC
GTCTCCACCATGTGCTTCGGCGACGGCGTCGACGCAGGCGTGGTCCGCGCCATGGCCGAC
GTCCAGACCGAGCTAGTCCTGTCCTTGTCCACGGTGCGCACGTTCGTGTTCGTGCCGTTC
CTCGCGGTGTCTAAGCTAATCTACCGCAAGCGATGGAACAAGCTGGCTGCGATACGGCAG
AAGCAGGAGGAGCTGTACCTCACACTCATTGACGGCTGCCGCCGACATCGCCGGGACTCA
GCTGACGAGACGCCGCCAACGTATGTGCACACGCTCATCGACCTCCAAGTCCCGGTAGAA
GAACTCGACAAGCAGAACAGCGTAGGAGGCGAGGACAGGCAGCAGCAACGGAGGCTCAAG
GACGGTGAACTAGTGGGACTCTGCTCGGAGTTCCTTGGTTCCAGCACTGAATCTGTATCC
GCGTCGCTGCAGTGGATCATGGCGAACCTAATGAAACGCCCAGACATGCAGGAGGCCATC
AGGAAGGAGGTTGACGCTGCTGTGGATGCAGACGCCGAGGAGGTCGGAGAGGAGGTTCTT
GGGAAGCTCGACTACCTCAACGCTGTCATCTTGGAGGCGCTCAGGCTGCATCCCACCACC
AAGTTGGCATTTAGGCAGGTGACGGAAGAAGACCAAGTGGTTCATGATGGCCACCGTATT
CCTGCGGGCACCAAGATGGTCTTCCCCTTGGAGGCTTTAGCGAGGGACAAGACAGTTTGG
GATGACCCTGATGAGTTCATGCCAGAACGTTTCCATGGATGTGGAGGTGGAGAAAGCACG
AAAAAGCTGCTGTCCATGGCAGCAGAGATGAAGATGATGCCTTTTGGTGGCGGCCGGAGG
ATGTGCCCTGCTATAAGCGTCTCGTTGCTCCACATCAGCTACTTCATGGCAAACCTTCTG
AGGGAGTTTGAGTGGAGGGAAGCAGACGGTGAGCACACCATTCAACTCCACACCGATCCT
GCCATCGAGATGTTCAATTTCATGAAGCGTCCACTGCGTGCTCACCTTGTGATTCGCCGA
CAGAAAGGCACAAAATTTCGTTAA

Peptide Sequence

PEP ID

EES13248
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:1312378:1314845:1 gene:SORBI_3007G015100 transcript:EES13248 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPLIRPCMQAATMQVLQLLLPLLLALAPVSILLVVRRATPPPIKARLATLKSAIARARKP
IIFVTDFATAHHLLVRGSRSTTAAAAGGGSFSNRPPSMAPSAVLSGRRYHNINSAPYGQL
WRALRYNLTSGVLHPTHLHRYAAARRHALRGLVADLSEQQQVAAGVVLAAESIRSAVFGL
VSTMCFGDGVDAGVVRAMADVQTELVLSLSTVRTFVFVPFLAVSKLIYRKRWNKLAAIRQ
KQEELYLTLIDGCRRHRRDSADETPPTYVHTLIDLQVPVEELDKQNSVGGEDRQQQRRLK
DGELVGLCSEFLGSSTESVSASLQWIMANLMKRPDMQEAIRKEVDAAVDADAEEVGEEVL
GKLDYLNAVILEALRLHPTTKLAFRQVTEEDQVVHDGHRIPAGTKMVFPLEALARDKTVW
DDPDEFMPERFHGCGGGESTKKLLSMAAEMKMMPFGGGRRMCPAISVSLLHISYFMANLL
REFEWREADGEHTIQLHTDPAIEMFNFMKRPLRAHLVIRRQKGTKFR

Transcript Sequence

Transcript ID

EES13248
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:1312378:1314845:1 gene:SORBI_3007G015100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACAAATGTATATCTGGTCGCTGCATGCATGCCGCTGATCAGGCCATGCATGCAGGCAGC
AACCATGCAAGTCCTCCAGTTGCTGCTCCCATTGTTGTTGGCTCTGGCGCCGGTGTCCAT
CCTGCTCGTCGTCCGGCGTGCAACGCCGCCGCCGATCAAAGCACGCCTGGCCACCCTCAA
ATCTGCCATAGCACGTGCACGTAAGCCAATTATCTTCGTCACCGACTTCGCCACGGCGCA
TCACCTGCTCGTGCGGGGCAGCAGATCAACAACCGCCGCCGCCGCCGGCGGCGGCTCTTT
CTCCAACCGCCCGCCGTCTATGGCACCCAGCGCCGTCCTCTCGGGCCGCCGCTACCACAA
CATCAACTCGGCACCCTACGGCCAGCTCTGGCGCGCCCTCCGCTACAACCTCACCTCGGG
TGTCCTCCACCCGACGCACCTGCACCGCTACGCGGCCGCAAGGCGCCACGCGCTACGCGG
CCTCGTGGCGGACCTCAGCGAGCAGCAGCAGGTCGCCGCCGGCGTGGTGCTCGCCGCGGA
GAGCATCCGCAGCGCCGTGTTTGGCCTCGTCTCCACCATGTGCTTCGGCGACGGCGTCGA
CGCAGGCGTGGTCCGCGCCATGGCCGACGTCCAGACCGAGCTAGTCCTGTCCTTGTCCAC
GGTGCGCACGTTCGTGTTCGTGCCGTTCCTCGCGGTGTCTAAGCTAATCTACCGCAAGCG
ATGGAACAAGCTGGCTGCGATACGGCAGAAGCAGGAGGAGCTGTACCTCACACTCATTGA
CGGCTGCCGCCGACATCGCCGGGACTCAGCTGACGAGACGCCGCCAACGTATGTGCACAC
GCTCATCGACCTCCAAGTCCCGGTAGAAGAACTCGACAAGCAGAACAGCGTAGGAGGCGA
GGACAGGCAGCAGCAACGGAGGCTCAAGGACGGTGAACTAGTGGGACTCTGCTCGGAGTT
CCTTGGTTCCAGCACTGAATCTGTATCCGCGTCGCTGCAGTGGATCATGGCGAACCTAAT
GAAACGCCCAGACATGCAGGAGGCCATCAGGAAGGAGGTTGACGCTGCTGTGGATGCAGA
CGCCGAGGAGGTCGGAGAGGAGGTTCTTGGGAAGCTCGACTACCTCAACGCTGTCATCTT
GGAGGCGCTCAGGCTGCATCCCACCACCAAGTTGGCATTTAGGCAGGTGACGGAAGAAGA
CCAAGTGGTTCATGATGGCCACCGTATTCCTGCGGGCACCAAGATGGTCTTCCCCTTGGA
GGCTTTAGCGAGGGACAAGACAGTTTGGGATGACCCTGATGAGTTCATGCCAGAACGTTT
CCATGGATGTGGAGGTGGAGAAAGCACGAAAAAGCTGCTGTCCATGGCAGCAGAGATGAA
GATGATGCCTTTTGGTGGCGGCCGGAGGATGTGCCCTGCTATAAGCGTCTCGTTGCTCCA
CATCAGCTACTTCATGGCAAACCTTCTGAGGGAGTTTGAGTGGAGGGAAGCAGACGGTGA
GCACACCATTCAACTCCACACCGATCCTGCCATCGAGATGTTCAATTTCATGAAGCGTCC
ACTGCGTGCTCACCTTGTGATTCGCCGACAGAAAGGCACAAAATTTCGTTAAGTGGACAA
AATGTCCTGTCGGTCCACTGATATATTTTCACTAGCCCGGTTATATGGAGGAACTACTTT
GAGTATCCCTCTAGGTAAATAACACAGCATTGTAATGAGAATTATTTTCAAAACTTTGTA
TCAACTCGATGTAATGTGTTTGAAAATTTAATAAAATCTTTCCTTATTTTTTTG