Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES13189
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:320663:323443:1 gene:SORBI_3007G003500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGTCACCTGCTGGATTTGGCACACCAACTCTCGCACCCGACCTCCTCTTCTCCCTTA
GTCGTCGTTCTAGCAAAATGGCTACTATTGCTCGTCGTTCCTCTCCTGCTCCTGCTGCAC
TACTACACCTCCCGGCGGTCAAGCCGCCGTCATGGCAGCGATGACGACAAGCAGCTGCTT
CCGCCGTCGCCTCCCGGGCTGCCAATCATCGGCCACCTTCACCTCGTCGGAGAACTCCCT
CACGTCTCCCTCCGCGACCTCGCCACAAAGCATGCCGGCGGCGGCCTGATGCTCCTCCGC
CTTGGCTCTGTCCCCACCCTCGTCGTGACATCTCCGCCGGCTGCGGAGGCGATCATGCGC
ACGCACGACCACGTGTTTGCGTCGCGGCCCACGTCCACTGTCAGCGACGACCTCCTGTAC
GGGTCCTCTGACATCGCCTTCTCCCCCTACGGCGAGCACTGGCGGCAGGCCAGAAAGCTT
GTCACCACGCACCTCTTGACCGTCAAGAAGGTGAACTCATATTGCCGTTCCCGCAAAGAA
GAGGTGAGCTTGGTGATGGACAAGATAAGAGAGGCAGCGACCGCGGGCACGGCCGTGGAC
ATGAGCACGATGATGAACACGTTCGCCAACGACATCGTGAGCCGCGCCGTGTCGGGCAAG
TTCTTCCGAGCAGAAGGCCGGAACAAGCTCTTCCGAGAGCTGGTGGAGGCCAACACTTCT
TTGTTTGGAGGGTTCAACCTAGAAGACTACTTCCCAGTGCTGGCGAGGTCGTTAGGTTTC
CTTAGCAGAAGGTTTCTGCTCAACAGGGCACAGGAGACGCACAAGAGATGGGACGAGCTG
CTTGAAACCATACTGAGCGACCACGAGAGAAGAAACTCCTCTCTGCGTCGCCATGACGGA
GGTGACTTCACTGATCTGTTGCTCTCGGTCCAGAAAGAGTATGGTATGACTAGAAATCAT
GTCAAAGCCATCCTGATGGACATGTTTGCTGCAGGCACAGACACGTCATCCTTGGTCCTG
GAGTTCGCCATGGCTGAGCTGATGCGCAACCCACAGCAGATGGCCAAGCTACAAGGAGAA
GTCCGGAAGCACACACCAGAGGGGCAGAAAATGGTGGAGGAAGAGGACCTAGCCAGCATG
CCCTACCTGAGAGCTGTCGTGAAGGAGACGCTGAGGTTGCGCGCTCCTGTCCCGCTGCTC
GTCCCTCACCTCTCCATGGCGGACTGCATCGTCAATGGCTACCATGTCCCCTCTGGCACT
CGGGTCATTGTCAACGCATGGGCGCTTGGCAGAGACCCAGAGTCATGGGAGAAGCCGGAG
GAGTTCATGCCGGAGAGGTTCGTCGACGGTGGCAGCGCTGCTGCCGGCGTCGACTTCAAA
GGGAACCACTTCCAGTTCCTGCCGTTTGGAGCTGGACGAAGGATCTGCCCTGGCCTCAAC
TTTGGGATTGCTACTGTTGAGATCATGCTGGCAAACCTCATGTACTGCTTTGACTGGCAG
CTCCCCATGGGCATGGAGGAGAAGGATGTTGACATGACAGAGGTGTTTGGAATCACGGTG
CATCTTAAGGAGAGGCTCATGCTTGTTCCCAGCCTTCCTTGTGCTGATGCACCTGGAACT
GGTCGTCAGTCGTCACTGCTCCATGCAAGCTCGTCGCGCACAAATGATTTGGAGTAA

Peptide Sequence

PEP ID

EES13189
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:320663:323443:1 gene:SORBI_3007G003500 transcript:EES13189 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MCHLLDLAHQLSHPTSSSPLVVVLAKWLLLLVVPLLLLLHYYTSRRSSRRHGSDDDKQLL
PPSPPGLPIIGHLHLVGELPHVSLRDLATKHAGGGLMLLRLGSVPTLVVTSPPAAEAIMR
THDHVFASRPTSTVSDDLLYGSSDIAFSPYGEHWRQARKLVTTHLLTVKKVNSYCRSRKE
EVSLVMDKIREAATAGTAVDMSTMMNTFANDIVSRAVSGKFFRAEGRNKLFRELVEANTS
LFGGFNLEDYFPVLARSLGFLSRRFLLNRAQETHKRWDELLETILSDHERRNSSLRRHDG
GDFTDLLLSVQKEYGMTRNHVKAILMDMFAAGTDTSSLVLEFAMAELMRNPQQMAKLQGE
VRKHTPEGQKMVEEEDLASMPYLRAVVKETLRLRAPVPLLVPHLSMADCIVNGYHVPSGT
RVIVNAWALGRDPESWEKPEEFMPERFVDGGSAAAGVDFKGNHFQFLPFGAGRRICPGLN
FGIATVEIMLANLMYCFDWQLPMGMEEKDVDMTEVFGITVHLKERLMLVPSLPCADAPGT
GRQSSLLHASSSRTNDLE

Transcript Sequence

Transcript ID

EES13189
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:320663:323443:1 gene:SORBI_3007G003500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAATCCAAAAGAGTCCATATGAGCTATAGTAGCTAGCTAGCAAGAATCAATCCATGCTAT
GTTTCCAAATACCAACGCAAATATATAGCTGTGAGGTTTCGGACATTGTTTGTAGTATCT
ATTTTGCCATCCAACTTTCCACGATCCACAAAACCACAAACTCTTTATTATATATAGAAG
CCAAAGGTTTGCCAACTTTCCAAACACGAAGGCAGCAGAAACACACCATTGCAAGCAACC
CTGGCTAGTATAGCAACCATGTGTCACCTGCTGGATTTGGCACACCAACTCTCGCACCCG
ACCTCCTCTTCTCCCTTAGTCGTCGTTCTAGCAAAATGGCTACTATTGCTCGTCGTTCCT
CTCCTGCTCCTGCTGCACTACTACACCTCCCGGCGGTCAAGCCGCCGTCATGGCAGCGAT
GACGACAAGCAGCTGCTTCCGCCGTCGCCTCCCGGGCTGCCAATCATCGGCCACCTTCAC
CTCGTCGGAGAACTCCCTCACGTCTCCCTCCGCGACCTCGCCACAAAGCATGCCGGCGGC
GGCCTGATGCTCCTCCGCCTTGGCTCTGTCCCCACCCTCGTCGTGACATCTCCGCCGGCT
GCGGAGGCGATCATGCGCACGCACGACCACGTGTTTGCGTCGCGGCCCACGTCCACTGTC
AGCGACGACCTCCTGTACGGGTCCTCTGACATCGCCTTCTCCCCCTACGGCGAGCACTGG
CGGCAGGCCAGAAAGCTTGTCACCACGCACCTCTTGACCGTCAAGAAGGTGAACTCATAT
TGCCGTTCCCGCAAAGAAGAGGTGAGCTTGGTGATGGACAAGATAAGAGAGGCAGCGACC
GCGGGCACGGCCGTGGACATGAGCACGATGATGAACACGTTCGCCAACGACATCGTGAGC
CGCGCCGTGTCGGGCAAGTTCTTCCGAGCAGAAGGCCGGAACAAGCTCTTCCGAGAGCTG
GTGGAGGCCAACACTTCTTTGTTTGGAGGGTTCAACCTAGAAGACTACTTCCCAGTGCTG
GCGAGGTCGTTAGGTTTCCTTAGCAGAAGGTTTCTGCTCAACAGGGCACAGGAGACGCAC
AAGAGATGGGACGAGCTGCTTGAAACCATACTGAGCGACCACGAGAGAAGAAACTCCTCT
CTGCGTCGCCATGACGGAGGTGACTTCACTGATCTGTTGCTCTCGGTCCAGAAAGAGTAT
GGTATGACTAGAAATCATGTCAAAGCCATCCTGATGGACATGTTTGCTGCAGGCACAGAC
ACGTCATCCTTGGTCCTGGAGTTCGCCATGGCTGAGCTGATGCGCAACCCACAGCAGATG
GCCAAGCTACAAGGAGAAGTCCGGAAGCACACACCAGAGGGGCAGAAAATGGTGGAGGAA
GAGGACCTAGCCAGCATGCCCTACCTGAGAGCTGTCGTGAAGGAGACGCTGAGGTTGCGC
GCTCCTGTCCCGCTGCTCGTCCCTCACCTCTCCATGGCGGACTGCATCGTCAATGGCTAC
CATGTCCCCTCTGGCACTCGGGTCATTGTCAACGCATGGGCGCTTGGCAGAGACCCAGAG
TCATGGGAGAAGCCGGAGGAGTTCATGCCGGAGAGGTTCGTCGACGGTGGCAGCGCTGCT
GCCGGCGTCGACTTCAAAGGGAACCACTTCCAGTTCCTGCCGTTTGGAGCTGGACGAAGG
ATCTGCCCTGGCCTCAACTTTGGGATTGCTACTGTTGAGATCATGCTGGCAAACCTCATG
TACTGCTTTGACTGGCAGCTCCCCATGGGCATGGAGGAGAAGGATGTTGACATGACAGAG
GTGTTTGGAATCACGGTGCATCTTAAGGAGAGGCTCATGCTTGTTCCCAGCCTTCCTTGT
GCTGATGCACCTGGAACTGGTCGTCAGTCGTCACTGCTCCATGCAAGCTCGTCGCGCACA
AATGATTTGGAGTAAAGATCGAACTGCAGACGTTGTAGTGCACGAGCACAATGCACACAG
ATGAAGTGAACTAGCTAGCTAGCTAGAATCTATATATGGATGGTTTGGTGCTTGGACTCA
ATGTATATTGTATATGGTAATAGTAGTGTAATGGTAACTCTATCTGGAATCTGATAAAAA
TAAGTACACTGGTATTTTGAAGGGAAAAAAAATCTCTTTGTTGTAGAGATTTCATCTAAT
GTTTTTGTGGAGCTGCCGGCAAGAGCTTTCCGGAGCATTGTTCATTGATAAAGAAGAAGG
TTACAACAATATTTTTTTTCGAAAGATAAGGTTACAACAATATTACAACACCACAAATCC
ACACAACGACAACAACCTGAACCCATCTCTTGGTGATGCTCTTATACACATAAATTTGTT
TTTTTCTTGGTCTCTATTTCCTCACCTTTTTTTCTCTTCGTGCACTACAATGACACGATG
GCAACTATATATATGGAGGGAAAACGTGGTCGTATTTGTGTTTATAATTTTGTTTCTTCG
GTTGGATAGAGACATGAGACGAGACCCCATGGGT