Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES13177
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:86853:90972:1 gene:SORBI_3007G000800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGAAGGCGGTGGTCGGCGACGAGGCGCACCTCAAGGCCTTCGAGGAAACGCTCGCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTCCACCTCAAGCCCAGGTGGGCCTCGTC
GTCGGCAAGCTCAGCGCTTCCTCCGACCGTGCCCTCGTCTATGCCCTTCTCCCCACGCCG
CTCACCGACGCCGCCGCCCCCGCATGCTCCCTCCGCGCCGCCCCCAAGTCCAAGCCTTCC
AAGGGCGGCGGCAGAGGCTCTTCCTCCTCCTCCTCCTCCTCAGACGCCTCTCTCGACTTC
GATGTCGAATGGATCGCCGAGCATGCGCGACAGGTGTCTAGGATGCTGCTCGGTGGTATG
AGTGTTATAGGTGCTTACCTATGGGCTTCCGAGGCATCATTCAAGGCCACATCTCCTGCT
GTCTTGTCGCAGGTTATTCGCGCGATTTCCCAAGCTTGCTATGGCAGTGCATCCGGTGAG
CGGCTGCTCATCCACATTTCTTACAGTCCTCGAAGATGGACCTGTCGTATATGTGAGGTT
GCCTCAGCAAGTCTGCGTCCGTGTGATTTTAAATACAGCAAACTATTATCTTCTCTTCAA
ACTTTCAGATGCACATATAATTTTGAGATAAGGTTAACATCTGTTCAATCTGAGCTGTTT
AAGAAAGTTATTTTGAAGGCAATCAGTCATCTCACAGAGGAAGTGCAGAATGCCAGAGCT
TTGGTCGATGGGCATCTGTTTTCAGAAGACATGAACATTAGTACAGAGGGCGCCCACCAA
GTTGATTTTCTTGTGCCATTCAATAATGCTGTGCCTGTTGAAGAATGCAGTTTAGAGGGA
GTTGCTGGGCTTATTCGCTTTGTTGGATCTGTCAGTGCCTTGGCATATTTAGGCCCGAAA
GAATCTGTTTCAGAAGCTATATCTGATCTAAAGGCGGACATCGTTACAAGTCTAAAAAGC
CGGTTGGATATCATCCTTGATGAGGCAGATGATGGCCCTGCCACTGATGAAGTGGAGAAA
TCACCATCTCAGAAGGTCACTCAAGTTATATTTCATGAGTTGAGAGAACCTTACAGCTTT
TCATTCCCAAGAAGAGTTCTGATACCTTGGTTGAGTGGCACCTATGTTTGTGATTACTTG
CAGCAATCAGAGACAGCAGAGGATGCTTTGGATCGCTGCAAGGAAGTGATAGCACTGGAA
ACAGCCGTGGAGAGCTCTTCAGTCCTGGAATCAGAAAGTGCAGCAGCTTGTAGCACGCTG
GAGTCCTTTTGGGTTATGGTGCCTGGATCTCACAGCGGAGGACAAGGTGGATCCAGCAAG
CTCAAGGACAGTCATTCTGTACAGAAAGATGATTCAAGCAAAAGACAATCTGGTGGGAAT
TTCAACATCATAGCCGCTCTGATTGTGCTACTGGTTGCTCTGCTAGCTGGATTGATATTC
ACTTTCTCTGCTGGTTCCAGTACCTGA

Peptide Sequence

PEP ID

EES13177
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:86853:90972:1 gene:SORBI_3007G000800 transcript:EES13177 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVKAVVGDEAHLKAFEETLASSSSSSSSSSPPPQAQVGLVVGKLSASSDRALVYALLPTP
LTDAAAPACSLRAAPKSKPSKGGGRGSSSSSSSSDASLDFDVEWIAEHARQVSRMLLGGM
SVIGAYLWASEASFKATSPAVLSQVIRAISQACYGSASGERLLIHISYSPRRWTCRICEV
ASASLRPCDFKYSKLLSSLQTFRCTYNFEIRLTSVQSELFKKVILKAISHLTEEVQNARA
LVDGHLFSEDMNISTEGAHQVDFLVPFNNAVPVEECSLEGVAGLIRFVGSVSALAYLGPK
ESVSEAISDLKADIVTSLKSRLDIILDEADDGPATDEVEKSPSQKVTQVIFHELREPYSF
SFPRRVLIPWLSGTYVCDYLQQSETAEDALDRCKEVIALETAVESSSVLESESAAACSTL
ESFWVMVPGSHSGGQGGSSKLKDSHSVQKDDSSKRQSGGNFNIIAALIVLLVALLAGLIF
TFSAGSST

Transcript Sequence

Transcript ID

EES13177
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:86853:90972:1 gene:SORBI_3007G000800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGACCGGGCCCCCCATCCAATTTGCTTGATTCCGCTGAGCAGACAGATCGGGTCGGGTCC
TCCGCCGGAGCCGGCGACGAACAAGGATGGTGAAGGCGGTGGTCGGCGACGAGGCGCACC
TCAAGGCCTTCGAGGAAACGCTCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTC
CACCTCAAGCCCAGGTGGGCCTCGTCGTCGGCAAGCTCAGCGCTTCCTCCGACCGTGCCC
TCGTCTATGCCCTTCTCCCCACGCCGCTCACCGACGCCGCCGCCCCCGCATGCTCCCTCC
GCGCCGCCCCCAAGTCCAAGCCTTCCAAGGGCGGCGGCAGAGGCTCTTCCTCCTCCTCCT
CCTCCTCAGACGCCTCTCTCGACTTCGATGTCGAATGGATCGCCGAGCATGCGCGACAGG
TGTCTAGGATGCTGCTCGGTGGTATGAGTGTTATAGGTGCTTACCTATGGGCTTCCGAGG
CATCATTCAAGGCCACATCTCCTGCTGTCTTGTCGCAGGTTATTCGCGCGATTTCCCAAG
CTTGCTATGGCAGTGCATCCGGTGAGCGGCTGCTCATCCACATTTCTTACAGTCCTCGAA
GATGGACCTGTCGTATATGTGAGGTTGCCTCAGCAAGTCTGCGTCCGTGTGATTTTAAAT
ACAGCAAACTATTATCTTCTCTTCAAACTTTCAGATGCACATATAATTTTGAGATAAGGT
TAACATCTGTTCAATCTGAGCTGTTTAAGAAAGTTATTTTGAAGGCAATCAGTCATCTCA
CAGAGGAAGTGCAGAATGCCAGAGCTTTGGTCGATGGGCATCTGTTTTCAGAAGACATGA
ACATTAGTACAGAGGGCGCCCACCAAGTTGATTTTCTTGTGCCATTCAATAATGCTGTGC
CTGTTGAAGAATGCAGTTTAGAGGGAGTTGCTGGGCTTATTCGCTTTGTTGGATCTGTCA
GTGCCTTGGCATATTTAGGCCCGAAAGAATCTGTTTCAGAAGCTATATCTGATCTAAAGG
CGGACATCGTTACAAGTCTAAAAAGCCGGTTGGATATCATCCTTGATGAGGCAGATGATG
GCCCTGCCACTGATGAAGTGGAGAAATCACCATCTCAGAAGGTCACTCAAGTTATATTTC
ATGAGTTGAGAGAACCTTACAGCTTTTCATTCCCAAGAAGAGTTCTGATACCTTGGTTGA
GTGGCACCTATGTTTGTGATTACTTGCAGCAATCAGAGACAGCAGAGGATGCTTTGGATC
GCTGCAAGGAAGTGATAGCACTGGAAACAGCCGTGGAGAGCTCTTCAGTCCTGGAATCAG
AAAGTGCAGCAGCTTGTAGCACGCTGGAGTCCTTTTGGGTTATGGTGCCTGGATCTCACA
GCGGAGGACAAGGTGGATCCAGCAAGCTCAAGGACAGTCATTCTGTACAGAAAGATGATT
CAAGCAAAAGACAATCTGGTGGGAATTTCAACATCATAGCCGCTCTGATTGTGCTACTGG
TTGCTCTGCTAGCTGGATTGATATTCACTTTCTCTGCTGGTTCCAGTACCTGAACCCACC
TGCACTATAACCGTGTTGTACCACCAGTAGATGAGATACCAAAGATGTTAGAAACTGTTG
AATAGGGAGTTGAAATATTTTTTGTTAGAAGAAAACTGTTTTTACATTTTTTTTAAATTT
CCTGTTGCCCTTGTTTGCAGCTAAGCTAAATGTGCTTACTCGCTAAATGTCTATAGGACT
ATATACCCTTATCTTCTCTGTTCTGCCTGCCTGAGAATGAATCCTATCTGTCTAGGCTGC
CAATTGGATTCCCCC