Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES13093
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:59952767:59957889:-1 gene:SORBI_3006G265600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACCTCTGCGCTGGACTCCCTCCCGGCGCCGCTCCGGTCGCTGCGGCTCAAGACG
AAGCAGCAGGAGCTCCTGCTCCGCGTCTCGGCGCTGGCGCTCATCTACGTGCTCGCCTTC
GCCGTCCGCCTCTTCTCCGTCCTCCGCTACGAGTCCATGATCCACGAGTTCGACCCCTAC
TTCAACTACCGCACCACGCTCTTCCTCACCGAGAACGGCTTCAGCGAGTTCTGGAACTGG
TTCGACTCCGAGAGCTGGTACCCGCTCGGCCGCGTCGTCGGGGGCACGCTCTTCCCGGGT
CTCATGGTGACCGCCGCACTGCTCCACCGCCTCCTCCGCGCGCTCTCCCTCGCCGTCCAC
ATCCGCGAGGTCTGCGTACTCACGGCGCCCTTCTTCGCCGCCAACACCACGCTCGTCGCC
TACGCCTTCGGCCGCGAGATCTGGGACTCCGGGGCGGGGCTCGTCGCCGCCGCGCTCATC
GCCATCGTTCCTGGCTACATCTCCCGCTCCGTTGCGGGGTCCTACGATAACGAGGGCGTC
GCCATCTTCGCCCTGCTGCTCACCTTCTACCTCTTCGTGCGCGCCGTCAACACGGGGTCG
CTCGCCTGGGCGCTTGCCTCGGCGTTCGGCTACTTCTACATGGTGTCGGCGTGGGGAGGC
TACGTGTTCATCATCAATCTAATCCCACTCTACGTGCTTGTGCTGCTTGTCACTGGGAGG
TATTCGCAGAGGCTCTACGTGGCCTACAATTGCATGTATGTGCTTGGGATGTTGCTTGCG
ATGCAGATCCGTTTTGTTGGATTCCAGCATGTGCAGTCCGGGGAGCACATGGCTGCTATG
GGAGTCTTCTTCCTCTTGCAGGTTTTCTTCTTCTTGGACTGGGTGAAATACCTGCTAAAT
GATGCCAGACTATTCAAGTCATTCCTTCGAACTACTCTTACATGTGTGATTACTGTTGGC
ACCCTGGCTCTTGGAATTGGTACTGCATCAGGTTACATCTCCCCTTGGACAGGACGGTTT
TACTCCCTGCTTGATCCTACCTATGCAAAGGACCATATACCAATCATTGCGTCTGTTTCT
GAGCATCAGCCAACAGCATGGTCATCTTTCATGTTTGACTTCCACATCCTCCTTTTCCTG
TTCCCAGCTGGCCTTTATTTCTGTTTCAAACGCCTGTCAGATGCCACTATATTCATTGTT
ATGTATGGCCTCACGAGTATGTACTTTGCTGGTGTGATGGTCCGGTTAATTCTTGTGGCA
GCACCAGCCGTTTGTCTTATTAGTGCTATTGCTGCATCTGCTACAATAAAGAATCTGACC
ACTTTGATCCGGGCAAAGAGCAGAAGTCCACAGACTACTTCTGGAAAAACAACTGGCTCA
AAGGCAGCTGCAAAGGGTGCAGTTGATCAAAGTTTACCATTCCAACACAATGCAGCTATT
GCTCTTCTTCTGGGTGCCTTTTACTTGCTAAGTAGGTATGCCATACACTGCACTTGGGTG
ACATCTGAGGCTTATTCTTCTCCATCTATAGTTTTGGCCGCAAGGGGTCATAATGGTGGA
AGAGTCATCTTTGATGATTATCGTGAGGCATACTATTGGCTTCGTCAGAACACTCCTCCT
GATGCTAAGATTATGTCTTGGTGGGACTATGGATACCAAATTACAGCTATGGGTAACAGA
ACTGTCATTGTTGATAATAATACATGGAATAACACACACATAGCTACAGTTGGACGTGCT
ATGTCATCTTATGAAGATGAAGCATATGAGATCATGCAATCACTTGATGTGAACTACGTG
CTTGTTGTATTTGGAGGTGTTACCGGATATTCTTCAGATGATATCAACAAGTTCTTATGG
ATGGTACGCATTGGTGGAGGAGTTTTCCCTGTAATCAAAGAGCCAGATTACCTTGTTAAT
GGGGAGTATCGTATTGACAAGGGGGCAGCACCAAAAATGCTGAACTGCCTAATGTACAAG
CTTTGTTACTACCGATTTGGAGAACTTACCACGGAATATGGAAAGCCTCCAGGGTATGAT
CGTGTAAGAGGAGTGGAGATTGGCAACAAAGACATAAAACTTGAATACTTGGAGGAGGCA
TTTACAACTTCAAACTGGATAGTGCGCATATACAAGGTGAAACCCCCAAAGAACAGGTCC
TGA

Peptide Sequence

PEP ID

EES13093
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:59952767:59957889:-1 gene:SORBI_3006G265600 transcript:EES13093 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATSALDSLPAPLRSLRLKTKQQELLLRVSALALIYVLAFAVRLFSVLRYESMIHEFDPY
FNYRTTLFLTENGFSEFWNWFDSESWYPLGRVVGGTLFPGLMVTAALLHRLLRALSLAVH
IREVCVLTAPFFAANTTLVAYAFGREIWDSGAGLVAAALIAIVPGYISRSVAGSYDNEGV
AIFALLLTFYLFVRAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYVLVLLVTGR
YSQRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKYLLN
DARLFKSFLRTTLTCVITVGTLALGIGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVS
EHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVA
APAVCLISAIAASATIKNLTTLIRAKSRSPQTTSGKTTGSKAAAKGAVDQSLPFQHNAAI
ALLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGHNGGRVIFDDYREAYYWLRQNTPP
DAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMQSLDVNYV
LVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRIDKGAAPKMLNCLMYK
LCYYRFGELTTEYGKPPGYDRVRGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKPPKNRS

Transcript Sequence

Transcript ID

EES13093
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:59952767:59957889:-1 gene:SORBI_3006G265600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCCGACCCGAACCTGCTCGCCGTCGCCTCCGCTTGGTCTCGCTCTCGCCGCATTCGTCT
TCCCCGCCCGTCCCGTCCCGTCCCCTGATCTCAGATCCAGACCAAACGAACTCCGCACTA
AACCCCCCCTTGCCCCAGGCGGCGCACGCATGAAACCCTAGTGACCCCATACAGATCTCC
GCGTCCGGATCACTGCGCGGCGCCACCATGGCGACCTCTGCGCTGGACTCCCTCCCGGCG
CCGCTCCGGTCGCTGCGGCTCAAGACGAAGCAGCAGGAGCTCCTGCTCCGCGTCTCGGCG
CTGGCGCTCATCTACGTGCTCGCCTTCGCCGTCCGCCTCTTCTCCGTCCTCCGCTACGAG
TCCATGATCCACGAGTTCGACCCCTACTTCAACTACCGCACCACGCTCTTCCTCACCGAG
AACGGCTTCAGCGAGTTCTGGAACTGGTTCGACTCCGAGAGCTGGTACCCGCTCGGCCGC
GTCGTCGGGGGCACGCTCTTCCCGGGTCTCATGGTGACCGCCGCACTGCTCCACCGCCTC
CTCCGCGCGCTCTCCCTCGCCGTCCACATCCGCGAGGTCTGCGTACTCACGGCGCCCTTC
TTCGCCGCCAACACCACGCTCGTCGCCTACGCCTTCGGCCGCGAGATCTGGGACTCCGGG
GCGGGGCTCGTCGCCGCCGCGCTCATCGCCATCGTTCCTGGCTACATCTCCCGCTCCGTT
GCGGGGTCCTACGATAACGAGGGCGTCGCCATCTTCGCCCTGCTGCTCACCTTCTACCTC
TTCGTGCGCGCCGTCAACACGGGGTCGCTCGCCTGGGCGCTTGCCTCGGCGTTCGGCTAC
TTCTACATGGTGTCGGCGTGGGGAGGCTACGTGTTCATCATCAATCTAATCCCACTCTAC
GTGCTTGTGCTGCTTGTCACTGGGAGGTATTCGCAGAGGCTCTACGTGGCCTACAATTGC
ATGTATGTGCTTGGGATGTTGCTTGCGATGCAGATCCGTTTTGTTGGATTCCAGCATGTG
CAGTCCGGGGAGCACATGGCTGCTATGGGAGTCTTCTTCCTCTTGCAGGTTTTCTTCTTC
TTGGACTGGGTGAAATACCTGCTAAATGATGCCAGACTATTCAAGTCATTCCTTCGAACT
ACTCTTACATGTGTGATTACTGTTGGCACCCTGGCTCTTGGAATTGGTACTGCATCAGGT
TACATCTCCCCTTGGACAGGACGGTTTTACTCCCTGCTTGATCCTACCTATGCAAAGGAC
CATATACCAATCATTGCGTCTGTTTCTGAGCATCAGCCAACAGCATGGTCATCTTTCATG
TTTGACTTCCACATCCTCCTTTTCCTGTTCCCAGCTGGCCTTTATTTCTGTTTCAAACGC
CTGTCAGATGCCACTATATTCATTGTTATGTATGGCCTCACGAGTATGTACTTTGCTGGT
GTGATGGTCCGGTTAATTCTTGTGGCAGCACCAGCCGTTTGTCTTATTAGTGCTATTGCT
GCATCTGCTACAATAAAGAATCTGACCACTTTGATCCGGGCAAAGAGCAGAAGTCCACAG
ACTACTTCTGGAAAAACAACTGGCTCAAAGGCAGCTGCAAAGGGTGCAGTTGATCAAAGT
TTACCATTCCAACACAATGCAGCTATTGCTCTTCTTCTGGGTGCCTTTTACTTGCTAAGT
AGGTATGCCATACACTGCACTTGGGTGACATCTGAGGCTTATTCTTCTCCATCTATAGTT
TTGGCCGCAAGGGGTCATAATGGTGGAAGAGTCATCTTTGATGATTATCGTGAGGCATAC
TATTGGCTTCGTCAGAACACTCCTCCTGATGCTAAGATTATGTCTTGGTGGGACTATGGA
TACCAAATTACAGCTATGGGTAACAGAACTGTCATTGTTGATAATAATACATGGAATAAC
ACACACATAGCTACAGTTGGACGTGCTATGTCATCTTATGAAGATGAAGCATATGAGATC
ATGCAATCACTTGATGTGAACTACGTGCTTGTTGTATTTGGAGGTGTTACCGGATATTCT
TCAGATGATATCAACAAGTTCTTATGGATGGTACGCATTGGTGGAGGAGTTTTCCCTGTA
ATCAAAGAGCCAGATTACCTTGTTAATGGGGAGTATCGTATTGACAAGGGGGCAGCACCA
AAAATGCTGAACTGCCTAATGTACAAGCTTTGTTACTACCGATTTGGAGAACTTACCACG
GAATATGGAAAGCCTCCAGGGTATGATCGTGTAAGAGGAGTGGAGATTGGCAACAAAGAC
ATAAAACTTGAATACTTGGAGGAGGCATTTACAACTTCAAACTGGATAGTGCGCATATAC
AAGGTGAAACCCCCAAAGAACAGGTCCTGAGGCATCTTCGCTAGTGAAATGGTTAGAGCT
ATTACCTCAGACAAGTACATTATTGTCAAAAATCTGAGTGGCAGATGGCGGGGTGGTTGT
TATTGGCACCTGCTTTGGCGAGACTGACTAGTAGCCATAGCATCAGTTCAGCTCAAAAGT
CAAGAAGATCTTTCCCCTCATTTGGTTTAGGTGTGATGGGTGTCATTCAGAACCAAGTGT
GACAACAGCGAGTACTTTTTGATTGTTAAGCATGTCATGACCGAACTTTGAAAGTTTTTG
TAGGCGCAGTGACATATTTGAGTAGAAAACTTGTCTTTGATCAATGCAAGGCAATGCAAA
TTTTCCAGCACTAAACACAAAATATGAACTGTTGGTTCTGTTCTCTCTATTATGTGTTTA
CATCATCCAGTGTAGGCGCATTGAGCAGTTTTTATGCT