Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES13073
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:59660434:59664020:-1 gene:SORBI_3006G261700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGAAGAAAGTGCTCATGCTCTGCGGCGACTACATGGAGGACTACGAGGTCATG
GTCCCGTTCCAAGCGCTGCAAGCGTATGGGGTGTCCGTGGATGCCGTCTGCCCTAGCAAG
AAGGCCGGCAACATCTGCCGCACCGCCGTCCATCAGGGGATCGGCCACCAGACATACTCT
GAGACAAAAGGTCATAATTTCACACTAAATGCTTCATTTGATGAGATAACTGCTAGTGAA
TATGATGGATTGGTAATTCCTGGTGGACGTGCACCCGAATATCTTGCAATGGATAGACAG
GTGCTTAACCTAGTCAGAAATTTCTCTGATGCTAAGAAGCCTATTGCATCAGTTTGTCAT
GGACAGTTGATTTTAGCGGCAGCAAGAGTAGTTGAGAACCGTAACTGCACAGCATATCCA
GCTGTTAAACCAGTTTTGGTTGCTGCTGGTGCTAAGTGGGAAGAACCCGACACAATGGCA
AAATGCACTGTTGATGGCAATCTCATCACTGCAGCAACTTATGATTCTCATCCTGAATTC
ATCAGCCTATTTGTCAAAGCACTTGGAGGTTCAGTGGCAGGCTCAGACAAGAAAATACTG
TTCCTCTGTGGGGACTACATGGAAGATTATGAGGTTATGGTCCCATTCCAGTCTCTTCAA
GCTCTTGGCTGCCATGTCGATGCTGTTTGCCCTGACAAGGGAGCCGGGGAGAAGTGCCCG
ACAGCCATTCATGATTTCGAAGGTGATCAGACTTACAGTGAGAAGCCTGGCCACGATTTT
ACTTTAACAGCATCATTTGAAAGTGTGGATGCTTCAAGCTATGATGCACTTGTGATTCCT
GGTGGGCGGGCTCCGGAGTATCTGGCTCTGAATGATAAAGTCATCAGCTTGGTGAAGGCC
TTCGCGGATAACGGAAAGCCAATTGCATCGATCTGCCATGGCCAACAGATATTGTCAGCT
GCTGGAGTCCTTAAGGGGAAGAAATGCACTGCGTACCCAGCCGTAAAGCTCAACGTTGTA
CTTGGGGGCGGAACCTGGCTGGAGCCTGACCCGATCCACCGCTGCTTCACCGACGGCAAT
CTCGTCACTGGCGCAGCCTGGCCCGGGCACCCTGAGTTCGTGTCCCAGCTCATGGCGTTG
CTCGGCATCAAGGTTTCCTTCTGA

Peptide Sequence

PEP ID

EES13073
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:59660434:59664020:-1 gene:SORBI_3006G261700 transcript:EES13073 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAKKVLMLCGDYMEDYEVMVPFQALQAYGVSVDAVCPSKKAGNICRTAVHQGIGHQTYS
ETKGHNFTLNASFDEITASEYDGLVIPGGRAPEYLAMDRQVLNLVRNFSDAKKPIASVCH
GQLILAAARVVENRNCTAYPAVKPVLVAAGAKWEEPDTMAKCTVDGNLITAATYDSHPEF
ISLFVKALGGSVAGSDKKILFLCGDYMEDYEVMVPFQSLQALGCHVDAVCPDKGAGEKCP
TAIHDFEGDQTYSEKPGHDFTLTASFESVDASSYDALVIPGGRAPEYLALNDKVISLVKA
FADNGKPIASICHGQQILSAAGVLKGKKCTAYPAVKLNVVLGGGTWLEPDPIHRCFTDGN
LVTGAAWPGHPEFVSQLMALLGIKVSF

Transcript Sequence

Transcript ID

EES13073
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:59660434:59664020:-1 gene:SORBI_3006G261700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAATAAATTTAGCAAAAAGAAAAAAGAAGAAAAGAAAAGAAAACAGGCGTAGAAGACAAA
TGAGAGCCAGGTGTTCTCCGGATGACTCTCCAGTGGCATATATAACACTACTGCTGTGCT
AGTACCCCCAAAGACTGGAGACAGTAGAGACTAGAGACGAAGGAGAGGCTTCTAGACTCC
GAGCTCGACGAAACAAGCCGAAGCGTCTCGCCTGCGCGGTCGCGAGCGTGCGAGTGGGGA
TTAGGGATGGCGGCGAAGAAAGTGCTCATGCTCTGCGGCGACTACATGGAGGACTACGAG
GTCATGGTCCCGTTCCAAGCGCTGCAAGCGTATGGGGTGTCCGTGGATGCCGTCTGCCCT
AGCAAGAAGGCCGGCAACATCTGCCGCACCGCCGTCCATCAGGGGATCGGCCACCAGACA
TACTCTGAGACAAAAGGTCATAATTTCACACTAAATGCTTCATTTGATGAGATAACTGCT
AGTGAATATGATGGATTGGTAATTCCTGGTGGACGTGCACCCGAATATCTTGCAATGGAT
AGACAGGTGCTTAACCTAGTCAGAAATTTCTCTGATGCTAAGAAGCCTATTGCATCAGTT
TGTCATGGACAGTTGATTTTAGCGGCAGCAAGAGTAGTTGAGAACCGTAACTGCACAGCA
TATCCAGCTGTTAAACCAGTTTTGGTTGCTGCTGGTGCTAAGTGGGAAGAACCCGACACA
ATGGCAAAATGCACTGTTGATGGCAATCTCATCACTGCAGCAACTTATGATTCTCATCCT
GAATTCATCAGCCTATTTGTCAAAGCACTTGGAGGTTCAGTGGCAGGCTCAGACAAGAAA
ATACTGTTCCTCTGTGGGGACTACATGGAAGATTATGAGGTTATGGTCCCATTCCAGTCT
CTTCAAGCTCTTGGCTGCCATGTCGATGCTGTTTGCCCTGACAAGGGAGCCGGGGAGAAG
TGCCCGACAGCCATTCATGATTTCGAAGGTGATCAGACTTACAGTGAGAAGCCTGGCCAC
GATTTTACTTTAACAGCATCATTTGAAAGTGTGGATGCTTCAAGCTATGATGCACTTGTG
ATTCCTGGTGGGCGGGCTCCGGAGTATCTGGCTCTGAATGATAAAGTCATCAGCTTGGTG
AAGGCCTTCGCGGATAACGGAAAGCCAATTGCATCGATCTGCCATGGCCAACAGATATTG
TCAGCTGCTGGAGTCCTTAAGGGGAAGAAATGCACTGCGTACCCAGCCGTAAAGCTCAAC
GTTGTACTTGGGGGCGGAACCTGGCTGGAGCCTGACCCGATCCACCGCTGCTTCACCGAC
GGCAATCTCGTCACTGGCGCAGCCTGGCCCGGGCACCCTGAGTTCGTGTCCCAGCTCATG
GCGTTGCTCGGCATCAAGGTTTCCTTCTGAAGTCCGAACTGAGAGTTTGAAAGTGCTCCC
GTGGGACCTGGGGGGCGTGATAGGATAGCTTTGGATATCCAGACAGAAGAGAACACACTC
GTATGACACGTATAGCGACCGCTCCATCTCATCCATGATCTATGCGCAGCAAGTTTCAGG
CTTACACTTTTCTTTTGTCAGCGTTGTGTAACTGTAACGTGGATGTTGTTTCTTCTTGGT
TCATTTTTTTTTGGTGTCGTCCTTTTGGGATTCAAACAATAAATAAACGCTTGTATACTG
CTATGTGTTATACTTCGAGCTGCTGGTTTTTT