Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12978
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:58279952:58284051:-1 gene:SORBI_3006G242100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGCTCCCGCTGCTGCGGCCGCTGTGGCCGGGCCTGGGCCCCGCGGCGGGGCCGGCC
GACGCGGCGCCGGAGCCGGCCAAGCCGTCGCTGCCGGCAACGTGGCTGCTGCTGCACGCG
CTCTTCTGCGCCACCTCCATGGCCGTCGGCTTCCGCTTCTCCCGCCTCATCGTCTACCTC
CTCTTCCTGCCCACCCCGCCCATCAACCCCGCCGCGCACCTCGTCTCGCTCGTGTCCCCA
CCCGCCGTCGTGCTCGCGGGCGCCAACGCCACGGCCATGGCAACGATCACCACGACAACG
ACCACGACGACCACCGTCACCACCACCACCACCGTGGCCGCCGAGATCGGTGACCACCCG
CAGCCGCAGCACCACCACCACCACCACGGCCCCGTCTTCGTCGGCCGACATCCGATCCGC
GTCCGCGCCTGGCCCCACCCGGACCCAAGCGAGCTCCTCAAGGCGCACCGCATCCTTGCC
GCCGTCCAGAACGCGCAGCGCAGCACCAAGCGCCGTGGCGCGGGACCCGCGAGGCCTGTC
ATTGCCGTCACCCCGACCACCACCTCCGCGCTCCAGGTGCCGTCGCTGACGTCTCTGGCG
CACACCCTCCGCCTCGTTGACGCCCAGCTCGTGTGGATCGTCGTCGAGCCGGGCCACCGC
ACCGACGCCGTCGCCGCGGTGCTGTCCCGCTCCAACCTCGACTTCCTCCACATCACCGGC
GCTGGCGACTCCACGGCGAGCCTGCGATTGCACGCCCTCAGGGAAATTCGGACGAAGCGG
ATGGACGGCATCGTGGTGTTCGCTGACGAGAACAGCATCCTCCGTACCGAGCTGTTCGAC
GAGGCGCAGAAGGTGACCACCGTGGGCGCCGTGCCCGTCGGCATCCTTGGCGAGGACGAC
GGCACCAGCGAGTCCTTCCTCCAGGCGCCGTCGTGCGACGCGGAAGGGAACCTGGTGGGC
TACCGCATCTCGGAGGAGACCGTGTTGCCGGCGAACCGGAGCGACATGCTGATGTCCAGC
AGGCTGGAGTGGGCCGGCTTCGTGGTGAACGCGCGGGCGCTGTGGGAGGACACCAAGGAG
CGGCCGGTGTGGGTGCGCGATCTCAGCGCCATCGACGACGCCGACGCTCGCGCTGCCAGC
CCTCTCGCGCTCGTCACCGACGCCGGCCGCGTCGAGCCGCTCGCCAGCTGTGCCCAGGCG
GCTCTCGCGTGGTCGCTGCGTTCCGACAGTCTCCACGAGGTCAAATTCCCACACGAGTGG
AAAATCGATCCTCCACTGCTGAATACCGGTGCCCGTCAGCAAACTGTTGAACCAGAGACA
CAACCGATGCAAACTACTCTAGCAAGCACTGAAGACCAGCACTAG

Peptide Sequence

PEP ID

EES12978
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:58279952:58284051:-1 gene:SORBI_3006G242100 transcript:EES12978 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKLPLLRPLWPGLGPAAGPADAAPEPAKPSLPATWLLLHALFCATSMAVGFRFSRLIVYL
LFLPTPPINPAAHLVSLVSPPAVVLAGANATAMATITTTTTTTTTVTTTTTVAAEIGDHP
QPQHHHHHHGPVFVGRHPIRVRAWPHPDPSELLKAHRILAAVQNAQRSTKRRGAGPARPV
IAVTPTTTSALQVPSLTSLAHTLRLVDAQLVWIVVEPGHRTDAVAAVLSRSNLDFLHITG
AGDSTASLRLHALREIRTKRMDGIVVFADENSILRTELFDEAQKVTTVGAVPVGILGEDD
GTSESFLQAPSCDAEGNLVGYRISEETVLPANRSDMLMSSRLEWAGFVVNARALWEDTKE
RPVWVRDLSAIDDADARAASPLALVTDAGRVEPLASCAQAALAWSLRSDSLHEVKFPHEW
KIDPPLLNTGARQQTVEPETQPMQTTLASTEDQH

Transcript Sequence

Transcript ID

EES12978
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:58279952:58284051:-1 gene:SORBI_3006G242100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTCTTGTGTCGTTCCAGACGATCCCAACGCAGCAGGCAGCAGCTGCCACCGCAATGCAC
ACATTCATCGTAGCACCGGACCACTGAATTCAATGGCGTTTACCCAGCCAATACGGAGGT
ACTCGACTGACAGCACTCACTCCGGGAGGGTTTAAAGAATGGAGGTAAAGTGAATGGCCT
TTTCTTCGCAGTGCACGAAATGACGAAAGCGTGTTTTCCTGTCAGCGCACGCACACTGCC
TAACGGCCGAAAATATTCCGACCCTTTCTGGACGCCAGGGTCTACTGCAGTGAGTCTGAG
GCCACCGTCAGCCACCCAACTTGGGTGTCCTTTTCCCTCCGGGCGCTTCGCGTCGCACCA
GACCGGCACTGCTCCTCTCCGCGCCGCTGCCAATTGCCAAATTCCCAGGGGACGGAATGG
GGCCATCGCCCATCCCCACCACACCATCCGCCACCAGCCGCTTGCCCTTCCTGGCTTCCT
CCCCTGCCGCTGCCGCGCTCCTAATAATTGCATCACCCCGTGCCCGCCCTGCTTAATCCT
GCTGCAGAAGTAGCCATAATCCTGTGCCTGCCACCTCCCTGCCTGCTTATATCACCACAC
CAGCTAGCTCCCCATCACCGCCACCGCCGACTACTGCTGCTGCCACCGCCCGCTGGCTGG
CTAAAAGCGCGTAGGCTGTGACCGACTGCGAGGGCACCGCACCGGAGAAGGAGCACGCCC
GCGCCCGCGCGAACCGCAGCGCAGAGGCAGGGGACTTGTCCGCAGGTCGGTCGATCGGTC
GGCATGAAGCTCCCGCTGCTGCGGCCGCTGTGGCCGGGCCTGGGCCCCGCGGCGGGGCCG
GCCGACGCGGCGCCGGAGCCGGCCAAGCCGTCGCTGCCGGCAACGTGGCTGCTGCTGCAC
GCGCTCTTCTGCGCCACCTCCATGGCCGTCGGCTTCCGCTTCTCCCGCCTCATCGTCTAC
CTCCTCTTCCTGCCCACCCCGCCCATCAACCCCGCCGCGCACCTCGTCTCGCTCGTGTCC
CCACCCGCCGTCGTGCTCGCGGGCGCCAACGCCACGGCCATGGCAACGATCACCACGACA
ACGACCACGACGACCACCGTCACCACCACCACCACCGTGGCCGCCGAGATCGGTGACCAC
CCGCAGCCGCAGCACCACCACCACCACCACGGCCCCGTCTTCGTCGGCCGACATCCGATC
CGCGTCCGCGCCTGGCCCCACCCGGACCCAAGCGAGCTCCTCAAGGCGCACCGCATCCTT
GCCGCCGTCCAGAACGCGCAGCGCAGCACCAAGCGCCGTGGCGCGGGACCCGCGAGGCCT
GTCATTGCCGTCACCCCGACCACCACCTCCGCGCTCCAGGTGCCGTCGCTGACGTCTCTG
GCGCACACCCTCCGCCTCGTTGACGCCCAGCTCGTGTGGATCGTCGTCGAGCCGGGCCAC
CGCACCGACGCCGTCGCCGCGGTGCTGTCCCGCTCCAACCTCGACTTCCTCCACATCACC
GGCGCTGGCGACTCCACGGCGAGCCTGCGATTGCACGCCCTCAGGGAAATTCGGACGAAG
CGGATGGACGGCATCGTGGTGTTCGCTGACGAGAACAGCATCCTCCGTACCGAGCTGTTC
GACGAGGCGCAGAAGGTGACCACCGTGGGCGCCGTGCCCGTCGGCATCCTTGGCGAGGAC
GACGGCACCAGCGAGTCCTTCCTCCAGGCGCCGTCGTGCGACGCGGAAGGGAACCTGGTG
GGCTACCGCATCTCGGAGGAGACCGTGTTGCCGGCGAACCGGAGCGACATGCTGATGTCC
AGCAGGCTGGAGTGGGCCGGCTTCGTGGTGAACGCGCGGGCGCTGTGGGAGGACACCAAG
GAGCGGCCGGTGTGGGTGCGCGATCTCAGCGCCATCGACGACGCCGACGCTCGCGCTGCC
AGCCCTCTCGCGCTCGTCACCGACGCCGGCCGCGTCGAGCCGCTCGCCAGCTGTGCCCAG
GCGGCTCTCGCGTGGTCGCTGCGTTCCGACAGTCTCCACGAGGTCAAATTCCCACACGAG
TGGAAAATCGATCCTCCACTGCTGAATACCGGTGCCCGTCAGCAAACTGTTGAACCAGAG
ACACAACCGATGCAAACTACTCTAGCAAGCACTGAAGACCAGCACTAGAGGACATTTCTT
TTTTTTTTTTCGTGGACAGTACAAGTCAGAGCAAATCAGGCAGCTGTTGCCCCCAATATT
TGTCAAAAGTCCACAGCAGTTGCACACTGATGCACCGTCGGTGCCAACCGCTGCCAAAGT
AACAGAAGCCGCCTCAGCTCAGCTCATTTCTTTGGACTCTACAGATAAAGCTACCAACAG
TACATGTAATCTTGGACACTTCGTCGTCTAAATCCCTTTGTATCGACGTATAAAAAATAG
GTAAAAATTTTAATTATCCGTACCTTCGTTCCCCCTTGCTGTAGAATAGCATTGTAGGCA
TATTGTTTTCGTGTAAAATAGATGAGAGCAGGGACTTGCAAAAGTCTTGTGGTTTGGGAA
TCGAAGCATTGGTTGTACACTTGTATGAAATAATGAAGATCCAGTTTTCACTTCGTTTTC