Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12947
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57715177:57723502:-1 gene:SORBI_3006G235600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCGGCGTTCCCGGCCTCGGCCGCGCTGGCGGCGGTCGCCGTGGTGGCGCTGCTG
CTCTGCTCCTGCAATGTGGCGCGCGCGCAGACGCCGGTGTTCGCGTGCGACGCGTCGAAC
GCGACGCTGGCGTCGTACGGGTTCTGCAACCGGTCGGCGTCGGCGTCGGCGCGCGCGGCG
GACCTGGTGTCGCGGCTGACGCTGGCGGAGAAGGTTGGGTTCCTGGTGGACAAGCAGGCG
GCGCTGCCCCGGCTGGGCATCCCGCTGTACGAGTGGTGGTCCGAGGCGCTGCACGGCGTC
TCCTACGTCGGCCCAGGGACACGGTTCTCGTCGCTGGTGCCCGCCGCCACCAGCTTCCCG
CAGCCCATCCTCACGGCCGCCTCCTTCAACGCCACCCTCTTCCGCGCCATCGGCGAGGTG
GTGTCGAACGAGGCGCGGGCGATGCACAACGTGGGGCTGGCGGGTCTCACGTTCTGGAGC
CCCAACATCAACATCTTCCGCGACCCGCGTTGGGGCCGAGGCCAGGAGACCCCCGGCGAG
GACCCGCTGCTCACCAGCAAGTACGCCGTCGGCTACGTCACGGGGCTGCAGGACGCCGGC
TCCGGTTCCGGCAGCCTCAAGGTCGCCGCCTGCTGCAAGCACTACACCGCCTACGACGTC
GACAACTGGAAGGGCGTCGAGCGCTATACCTTCAACGCCGTGGTGTCGCAGCAGGATCTG
GACGACACGTTCCAGCCCCCGTTCAAGAGCTGCGTGGTGGACGGGAACGTGGCCAGCGTC
ATGTGCTCCTACAACCAGGTCAACGGGAAGCCCACCTGCGCCGACAAGGATCTCCTGTCT
GGTGTCATCAGAGGCGACTGGAAGCTCAACGGGTACATTTCGTCAGACTGCGACTCGGTC
GATGTGCTGTACAACAACCAGCACTACACCAAAACCCCCGAGGACGCAGCTGCCATCTCG
ATCAAAGCAGGGCTGGACCTGAACTGCGGCAACTTCCTGGCGCAGCACACGGTGGCGGCC
GTGCAGGCCGGCAAGCTGTCGGAGTCCGACGTCGACCGGGCCATCACCAATAACTTCATC
ACGCTCATGCGGCTGGGCTTCTTCGACGGCGATCCACGGAAGCTGCCGTTCGGCAACCTT
GGCCCGAGCGACGTGTGCACGTCCTCCAACCAGGAGCTGGCTCGCGAGGCCGCGCGCCAG
GGCATCGTGCTCCTCAAGAACAGCGGCGCGCTCCCGCTCTCCGCCAGCTCCATCAAGTCC
CTGGCCGTCATTGGCCCCAATGCCAATGCCAGCTTCACCATGATCGGCAACTACGAAGGC
ACGCCGTGCAAGTACACGACGCCGCTGCAGGGCCTGGGCGCGAACGTGGCCACAGTGTAC
CAGCCGGGGTGCACGAATGTAGGGTGCAGCGGCAACAGCCTGCAGCTCGACGCGGCCACC
AAGGCCGCAGCCAGCGCTGACGTGACCGTGCTGGTCGTCGGCGCCGACCAGTCCATCGAA
CGCGAGAGCCTGGACCGGACGAGCCTCCTGCTCCCCGGCCAGCAGCCGCAGCTCGTGTCC
GCGGTCGCCAACGCGTCCAGAGGTCCGTGCATCCTCGTCATCATGTCAGGCGGCCCCTTT
GACATCTCGTTCGCCAAGTCCAGCGACAAGATCGCCGCGATTCTCTGGGTCGGATACCCT
GGCGAAGCCGGCGGCGCCGCCATCGCCGACGTCCTCTTCGGCCACCACAACCCAAGTGGA
AGGTTGCCGGTGACATGGTACCCCGAGTCGTTCACCAAAGTCCCGATGATCGACATGCGC
ATGCGGCCGGACGCGTCGACGGGCTACCCCGGCCGGACATACCGGTTCTACACCGGCGAC
ACAGTGTACGCGTTCGGCGACGGGCTGAGCTACACCAGCTTCGCGCACCACCTGGTGTCG
GCGCCGAAGCAGGTGGCCCTGCAGCTCGCGGAGGGCCACACGTGCCTGACCGAGCAATGC
CCGTCCGTGGAGGCCGAGGGCGCGCACTGCGAGGGCCTGGCGTTCGACGTGCACCTCCGG
GTGCGGAACGCGGGCGACATGTCCGGCGCGCACACGGTGTTCCTGTTCTCGTCGCCGCCG
GCGGTGCACAACGCGCCGGCGAAGCACCTGCTGGGGTTCGAGAAGGTGTCGCTGGAGCCC
GGGCAGGCGGGCGTGGTGGCGTTCAAGGTGGACGTGTGCAAGGACCTCAGCGTCGTGGAC
GAGCTGGGCAACAGGAAGGTGGCGCTCGGCAACCACACGCTGCACGTCGGGGACCTCAAG
CACACGCTCAGCTTGGGAGTTTGA

Peptide Sequence

PEP ID

EES12947
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57715177:57723502:-1 gene:SORBI_3006G235600 transcript:EES12947 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAFPASAALAAVAVVALLLCSCNVARAQTPVFACDASNATLASYGFCNRSASASARAA
DLVSRLTLAEKVGFLVDKQAALPRLGIPLYEWWSEALHGVSYVGPGTRFSSLVPAATSFP
QPILTAASFNATLFRAIGEVVSNEARAMHNVGLAGLTFWSPNINIFRDPRWGRGQETPGE
DPLLTSKYAVGYVTGLQDAGSGSGSLKVAACCKHYTAYDVDNWKGVERYTFNAVVSQQDL
DDTFQPPFKSCVVDGNVASVMCSYNQVNGKPTCADKDLLSGVIRGDWKLNGYISSDCDSV
DVLYNNQHYTKTPEDAAAISIKAGLDLNCGNFLAQHTVAAVQAGKLSESDVDRAITNNFI
TLMRLGFFDGDPRKLPFGNLGPSDVCTSSNQELAREAARQGIVLLKNSGALPLSASSIKS
LAVIGPNANASFTMIGNYEGTPCKYTTPLQGLGANVATVYQPGCTNVGCSGNSLQLDAAT
KAAASADVTVLVVGADQSIERESLDRTSLLLPGQQPQLVSAVANASRGPCILVIMSGGPF
DISFAKSSDKIAAILWVGYPGEAGGAAIADVLFGHHNPSGRLPVTWYPESFTKVPMIDMR
MRPDASTGYPGRTYRFYTGDTVYAFGDGLSYTSFAHHLVSAPKQVALQLAEGHTCLTEQC
PSVEAEGAHCEGLAFDVHLRVRNAGDMSGAHTVFLFSSPPAVHNAPAKHLLGFEKVSLEP
GQAGVVAFKVDVCKDLSVVDELGNRKVALGNHTLHVGDLKHTLSLGV

Transcript Sequence

Transcript ID

EES12947
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57715177:57723502:-1 gene:SORBI_3006G235600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCCTCACCAGTCACCACCAGCTGTTGCTCACACCACCCACCACCCTCACCCTGCCGCGC
GCGCCACTCTGACGAGACCACTCTATGGGGATGTTTGGTTGCTAGCCACAATCTACCACA
ACTAACTTTAGGCAAGTGTGGCAAGCCACAAAAAGTGTGGCTAACAAATTGGTTGCCACA
CTTTGCCATGCCTAAAGGAATCTTGCCACACTTTTTAACTCTATGACATGTGGAGCCCAA
AAGAATCATGCCTAAGCTTAGTTGTGAACCAAACACTTGCCAACTTGGTCAAACTTGCCT
AAGGTAAAATGTGGCAAATTGTGGCTAGCAACCAAACAGCCCCATATATGCCGCTGCTGC
TAGCGCCTGTGCTTCGGGCGGGCTGCTGCTGGTGACCGAGAATCATTTCAGTCCAGTCCA
GAGAAGGGTCGGGGGTGCGGCGAGCTAGCTGCCTATAGCTACCATGGCCGCGGCGTTCCC
GGCCTCGGCCGCGCTGGCGGCGGTCGCCGTGGTGGCGCTGCTGCTCTGCTCCTGCAATGT
GGCGCGCGCGCAGACGCCGGTGTTCGCGTGCGACGCGTCGAACGCGACGCTGGCGTCGTA
CGGGTTCTGCAACCGGTCGGCGTCGGCGTCGGCGCGCGCGGCGGACCTGGTGTCGCGGCT
GACGCTGGCGGAGAAGGTTGGGTTCCTGGTGGACAAGCAGGCGGCGCTGCCCCGGCTGGG
CATCCCGCTGTACGAGTGGTGGTCCGAGGCGCTGCACGGCGTCTCCTACGTCGGCCCAGG
GACACGGTTCTCGTCGCTGGTGCCCGCCGCCACCAGCTTCCCGCAGCCCATCCTCACGGC
CGCCTCCTTCAACGCCACCCTCTTCCGCGCCATCGGCGAGGTGGTGTCGAACGAGGCGCG
GGCGATGCACAACGTGGGGCTGGCGGGTCTCACGTTCTGGAGCCCCAACATCAACATCTT
CCGCGACCCGCGTTGGGGCCGAGGCCAGGAGACCCCCGGCGAGGACCCGCTGCTCACCAG
CAAGTACGCCGTCGGCTACGTCACGGGGCTGCAGGACGCCGGCTCCGGTTCCGGCAGCCT
CAAGGTCGCCGCCTGCTGCAAGCACTACACCGCCTACGACGTCGACAACTGGAAGGGCGT
CGAGCGCTATACCTTCAACGCCGTGGTGTCGCAGCAGGATCTGGACGACACGTTCCAGCC
CCCGTTCAAGAGCTGCGTGGTGGACGGGAACGTGGCCAGCGTCATGTGCTCCTACAACCA
GGTCAACGGGAAGCCCACCTGCGCCGACAAGGATCTCCTGTCTGGTGTCATCAGAGGCGA
CTGGAAGCTCAACGGGTACATTTCGTCAGACTGCGACTCGGTCGATGTGCTGTACAACAA
CCAGCACTACACCAAAACCCCCGAGGACGCAGCTGCCATCTCGATCAAAGCAGGGCTGGA
CCTGAACTGCGGCAACTTCCTGGCGCAGCACACGGTGGCGGCCGTGCAGGCCGGCAAGCT
GTCGGAGTCCGACGTCGACCGGGCCATCACCAATAACTTCATCACGCTCATGCGGCTGGG
CTTCTTCGACGGCGATCCACGGAAGCTGCCGTTCGGCAACCTTGGCCCGAGCGACGTGTG
CACGTCCTCCAACCAGGAGCTGGCTCGCGAGGCCGCGCGCCAGGGCATCGTGCTCCTCAA
GAACAGCGGCGCGCTCCCGCTCTCCGCCAGCTCCATCAAGTCCCTGGCCGTCATTGGCCC
CAATGCCAATGCCAGCTTCACCATGATCGGCAACTACGAAGGCACGCCGTGCAAGTACAC
GACGCCGCTGCAGGGCCTGGGCGCGAACGTGGCCACAGTGTACCAGCCGGGGTGCACGAA
TGTAGGGTGCAGCGGCAACAGCCTGCAGCTCGACGCGGCCACCAAGGCCGCAGCCAGCGC
TGACGTGACCGTGCTGGTCGTCGGCGCCGACCAGTCCATCGAACGCGAGAGCCTGGACCG
GACGAGCCTCCTGCTCCCCGGCCAGCAGCCGCAGCTCGTGTCCGCGGTCGCCAACGCGTC
CAGAGGTCCGTGCATCCTCGTCATCATGTCAGGCGGCCCCTTTGACATCTCGTTCGCCAA
GTCCAGCGACAAGATCGCCGCGATTCTCTGGGTCGGATACCCTGGCGAAGCCGGCGGCGC
CGCCATCGCCGACGTCCTCTTCGGCCACCACAACCCAAGTGGAAGGTTGCCGGTGACATG
GTACCCCGAGTCGTTCACCAAAGTCCCGATGATCGACATGCGCATGCGGCCGGACGCGTC
GACGGGCTACCCCGGCCGGACATACCGGTTCTACACCGGCGACACAGTGTACGCGTTCGG
CGACGGGCTGAGCTACACCAGCTTCGCGCACCACCTGGTGTCGGCGCCGAAGCAGGTGGC
CCTGCAGCTCGCGGAGGGCCACACGTGCCTGACCGAGCAATGCCCGTCCGTGGAGGCCGA
GGGCGCGCACTGCGAGGGCCTGGCGTTCGACGTGCACCTCCGGGTGCGGAACGCGGGCGA
CATGTCCGGCGCGCACACGGTGTTCCTGTTCTCGTCGCCGCCGGCGGTGCACAACGCGCC
GGCGAAGCACCTGCTGGGGTTCGAGAAGGTGTCGCTGGAGCCCGGGCAGGCGGGCGTGGT
GGCGTTCAAGGTGGACGTGTGCAAGGACCTCAGCGTCGTGGACGAGCTGGGCAACAGGAA
GGTGGCGCTCGGCAACCACACGCTGCACGTCGGGGACCTCAAGCACACGCTCAGCTTGGG
AGTTTGATGAAAAAAACCCGAGACTGATCGAGAGGGAAATGGCTACCATGATGGAGGCTC
TGTTGGAATTGGATGGGTCGGCCGGGGAAGAGAGGTTTGTCAGAATTGGTTCGGCAGGTG
TCTAATAACGGCTTCCTGTTGGCAAAGAATTGGATCCACGGGCAGCTTACTGATTTGTTT
GGAGGTGTTGGATTCATTGGAGGTTCGATTTGTGATTGTGATCCTGATAAATGTAATCGA
TTGGAAATTCCGAAGGGAGTATGTAGAGCTCTAGTCTTTTCATACAATCAATTCCAATGT
GCTCACATGGTTCTTTTTCTCATGCTGAAGAAAAATAATCTGAGTTACAAATACATAAAT
GATAAATCCATACGTTGATGACCCTAACAGGGCCAAATTATGTCTGTAACCTTTGTTACT
GACCAAGTTACCTTTACACGGAACTTCTCACAACCGAAACGACATTCACAGCAATCTGTG
TGGCCGGAGTTGACGCCATGATCAGTTTGGTGCCATCTCTATTTTCAATTGTCATGACTC
AAGACCAGCTTCTCTGTCAAACAGACATTCACGACGCGACGCCACTGGGATAATTCTACT
ACCATCAATAGTAAACACTCCACCTGTTTCACCTTTAAAAGGACAAATTCATCGA