Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12942
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57574088:57577745:-1 gene:SORBI_3006G234100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGGCGAGCACGACGTCAGCGACCACCGCCGCCGCCGCTGCCACCACCAAGTCGCGG
GGATCGTCGTCGGCCCTCTGTCCGAGGGTGGCCGCCGGCGGCAGGCGGCGCTCCGGGGTG
GTGCGGTGCGACGCCACCGGCGTGGAGTCCCAGGCGCAGGCCGTGGCCAAGGCGGCCAGC
GTCGCCGCTCTCGAGCAGTTCAAGATATCCGCCGACCGGTACATGAAGGAAAGGAGTACC
ATAGCTGTGATAGGCCTCAGTGTACACACAGCACCAGTGGAGATGCGTGAAAAACTTGCT
GTTGCAGAGGAACTGTGGCCCCGTGCTATTCAAGAACTCACTAGCCTGAACCATATTGAA
GAGGCTGCTGTTCTTAGTACCTGTAATAGAATGGAAATATATGTGGTGGCCCTATCATGG
AACCGTGGTATCAGAGAAGTAGTGGACTGGATGTCAAAGAAAAGTGGTATTCCTGCTTCC
GAGCTTAGGGAGCACCTGTTCATTTTGCGAAGCAGTGATGCTACACGCCATCTGTTTGAG
GTGTCAGCTGGCCTTGACTCGTTGGTTCTCGGTGAAGGACAAATCCTTGCTCAAGTTAAA
CAAGTTGTGAGGAGCGGACAAAACAGTGGAGGCTTGGGAAAGAACATTGATAGGATGTTC
AAGGATGCAATCACTGCTGGAAAGCGTGTCCGCTGTGAGACCAACATATCATCTGGTGCT
GTTTCTGTCAGTTCAGCAGCAGTTGAATTGGCCCTGATGAAGCTTCCCAAGTCTGAATCT
CTGTCAGCTAGGATGCTTTTGATTGGTGCCGGGAAAATGGGAAAATTAGTGATTAAACAT
CTGATTGCCAAAGGATGCAAGAAGGTTGTTGTGGTGAACCGCTCAGTGGAAAGGGTGGAT
GCCATTCGTGGGGAGATGAAAGATATCGAAATTGTGTACAGACCTCTCTCAGAGATGTAT
GAAGCTGCTGCTGAAGCTGATGTCGTGTTCACAAGCACCGCATCTGAAACTCCATTGTTC
ACAAAAGAACACGCAGAGGCACTCCCCCTTGTTTCTGATACTATGGGAGGTGCTCGCCTG
TTTGTAGACATATCTGTCCCCAGAAATGTCAGCGCATGTGTGTCTGAAGTTGGCGCTGCA
CGAGTATACAATGTCGATGACTTGAAAGAGGTGGTGGAAGCCAACAAGGAGGACCGGCTC
AGGAAAGCAATGGAGGCGCAGACAATCATCACGGAAGAACTGAAACGGTTCGAGGCATGG
AGGGACTCGCTGGAGACCGTCCCGACCATCAAGAAGCTGAGGTCATATGCTGACAGGATC
AGGGCCTCGGAGCTCGAGAAGTGCTTGCAGAAGGTTGGTGAAGACGCCCTCACCAAGAAG
ATGAGGAGAGCCATCGAGGAGCTGAGCACTGGCATCGTTAACAAGCTCCTCCATGGCCCA
CTGCAGCACCTGAGGTGCGACGGCAGCGACAGCCGCACCCTCGATGAGACACTCGAGAAC
ATGCACGCCCTCAACCGGATGTTCAGCCTTGACACGGAGAAGGCGATCATTGAGCAGAAG
ATCAAGGCCAAGGTGGAGAAGACCCAAAATTGA

Peptide Sequence

PEP ID

EES12942
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57574088:57577745:-1 gene:SORBI_3006G234100 transcript:EES12942 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMASTTSATTAAAAATTKSRGSSSALCPRVAAGGRRRSGVVRCDATGVESQAQAVAKAAS
VAALEQFKISADRYMKERSTIAVIGLSVHTAPVEMREKLAVAEELWPRAIQELTSLNHIE
EAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFILRSSDATRHLFE
VSAGLDSLVLGEGQILAQVKQVVRSGQNSGGLGKNIDRMFKDAITAGKRVRCETNISSGA
VSVSSAAVELALMKLPKSESLSARMLLIGAGKMGKLVIKHLIAKGCKKVVVVNRSVERVD
AIRGEMKDIEIVYRPLSEMYEAAAEADVVFTSTASETPLFTKEHAEALPLVSDTMGGARL
FVDISVPRNVSACVSEVGAARVYNVDDLKEVVEANKEDRLRKAMEAQTIITEELKRFEAW
RDSLETVPTIKKLRSYADRIRASELEKCLQKVGEDALTKKMRRAIEELSTGIVNKLLHGP
LQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKTQN

Transcript Sequence

Transcript ID

EES12942
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57574088:57577745:-1 gene:SORBI_3006G234100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACGCCGACACGCTTCGCCATCAGGCGCGCGTGAGGTAGCCACGGGAGCTCATGTCCCCA
CCTCGCCGTCGCAGGCCATGCCATACAAAATCGAAGCCGCTGCATCTGGTGTCAGCGACG
AGGGAGATAAGGGTTGTGGATAGACCGCTGCGGCCGCAGCCAATCACAGGCCAGAGGACA
CCACACTCCCGCTACGCTCTCATCCCCCGGCTCATCTCCTCCCCTGATGCCACCAATTCC
ACCTCACACCACGCCCAAGCCCAACATGCGGCATAAAAAATGGGCACGCATGCTAAATAA
GAGGAGCTTGGGAAGCTTCCAAGGCCTCCGATTTCGGCAATGCTGCGGTGAAATCCCGCA
CCTCCTTCCTTCCTCTCCCACCGAGGACCCTCGCGCCAAGAGCTGAACGGGAAGCGCACA
ACAGTGTTTCCCCTCGCCCGTCTCCTTTCCCTCTCCGCGATTCTTGTCGCATTGGTTTCG
TTCCCTCGCGAAAGGAGGCGGCTTTCTGTCTTCCCTGATCTATCTAGATGATGGCGAGCA
CGACGTCAGCGACCACCGCCGCCGCCGCTGCCACCACCAAGTCGCGGGGATCGTCGTCGG
CCCTCTGTCCGAGGGTGGCCGCCGGCGGCAGGCGGCGCTCCGGGGTGGTGCGGTGCGACG
CCACCGGCGTGGAGTCCCAGGCGCAGGCCGTGGCCAAGGCGGCCAGCGTCGCCGCTCTCG
AGCAGTTCAAGATATCCGCCGACCGGTACATGAAGGAAAGGAGTACCATAGCTGTGATAG
GCCTCAGTGTACACACAGCACCAGTGGAGATGCGTGAAAAACTTGCTGTTGCAGAGGAAC
TGTGGCCCCGTGCTATTCAAGAACTCACTAGCCTGAACCATATTGAAGAGGCTGCTGTTC
TTAGTACCTGTAATAGAATGGAAATATATGTGGTGGCCCTATCATGGAACCGTGGTATCA
GAGAAGTAGTGGACTGGATGTCAAAGAAAAGTGGTATTCCTGCTTCCGAGCTTAGGGAGC
ACCTGTTCATTTTGCGAAGCAGTGATGCTACACGCCATCTGTTTGAGGTGTCAGCTGGCC
TTGACTCGTTGGTTCTCGGTGAAGGACAAATCCTTGCTCAAGTTAAACAAGTTGTGAGGA
GCGGACAAAACAGTGGAGGCTTGGGAAAGAACATTGATAGGATGTTCAAGGATGCAATCA
CTGCTGGAAAGCGTGTCCGCTGTGAGACCAACATATCATCTGGTGCTGTTTCTGTCAGTT
CAGCAGCAGTTGAATTGGCCCTGATGAAGCTTCCCAAGTCTGAATCTCTGTCAGCTAGGA
TGCTTTTGATTGGTGCCGGGAAAATGGGAAAATTAGTGATTAAACATCTGATTGCCAAAG
GATGCAAGAAGGTTGTTGTGGTGAACCGCTCAGTGGAAAGGGTGGATGCCATTCGTGGGG
AGATGAAAGATATCGAAATTGTGTACAGACCTCTCTCAGAGATGTATGAAGCTGCTGCTG
AAGCTGATGTCGTGTTCACAAGCACCGCATCTGAAACTCCATTGTTCACAAAAGAACACG
CAGAGGCACTCCCCCTTGTTTCTGATACTATGGGAGGTGCTCGCCTGTTTGTAGACATAT
CTGTCCCCAGAAATGTCAGCGCATGTGTGTCTGAAGTTGGCGCTGCACGAGTATACAATG
TCGATGACTTGAAAGAGGTGGTGGAAGCCAACAAGGAGGACCGGCTCAGGAAAGCAATGG
AGGCGCAGACAATCATCACGGAAGAACTGAAACGGTTCGAGGCATGGAGGGACTCGCTGG
AGACCGTCCCGACCATCAAGAAGCTGAGGTCATATGCTGACAGGATCAGGGCCTCGGAGC
TCGAGAAGTGCTTGCAGAAGGTTGGTGAAGACGCCCTCACCAAGAAGATGAGGAGAGCCA
TCGAGGAGCTGAGCACTGGCATCGTTAACAAGCTCCTCCATGGCCCACTGCAGCACCTGA
GGTGCGACGGCAGCGACAGCCGCACCCTCGATGAGACACTCGAGAACATGCACGCCCTCA
ACCGGATGTTCAGCCTTGACACGGAGAAGGCGATCATTGAGCAGAAGATCAAGGCCAAGG
TGGAGAAGACCCAAAATTGAGGCCAGGAAGCAATTTTCCTACCCCTTTATCTCTATATAT
AGCCTCTCCAGCCTATTTCCAAGTTTTTTTATCTTTCGCTTACTGAGCCACTCACTGAGA
TCGTCAACTGTGTCGTGATTTTAGAGCCATGTCAGCGTGTCGTGAATAACAGCAATGTAT
CCCAATTCCCCACTGAAGAAAGACTATATATTTATATGCATTGATTGGAGCAAATACTAC
TGTAAATTAATACAATCATGGGCTCATGGCAACTGTAGCTTGACATCTGAGCTAAAGTTT
TACACTGTATTTGATAGTATGTAGATGAGGATCATAGAATTAGGGATTTACAGTGCATAC
CATCAGTACACTGGAAGTCTGCATTTAATATTGCTTGGATTGTTTGAAACTCATGATTCT
GAGCAAGGAAGCTGTTCAGTTTT