Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12937
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57521478:57524467:-1 gene:SORBI_3006G233000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACAGCGCGTTCAGCGAGGACATACTCGCTGACAAGCTCGCCAAGCTCAACAACACG
CAGCAATGCATCGAGACACTGTCGCATTGGTGCATTTACCATAGAAAGAATGCAGAGCAA
ATTGTTCAGACTTGGGACAAGCAGTTCCACAGCTCTGGCAAGGAGCAGATGGTCCCTTTC
CTTTATCTTGCTAATGACATCTTACAGAACAGCAAGCGCAACGGGACAGAGTTTGTAGAA
GAATTTTGGAAAGTTCTCCCTGGGGCGCTTAAAAATGTAAGCGAGAATGGTGACGACCGT
GGGAAGAAGGTGGCATCTAGGCTGGTTGACATATGGCAAGAAAGGAGAGTTTTCGGTTCA
CGTGCTGGGGGCATCAAGGATGTGATGCTTGGGGCAGCTCCCCTTCCTGATTTAGATATG
ACCAAAAAGCGCTCTCACAGTTCTTCAATAAGGATTGTTAAAAGAGATTCGCGTTCTGTG
AAACTTAGACTAGGCATTGGAGGAACTGCAGAGAGGATTGTATCTGCATTGCACACTGTT
CTCAGTGAACAAGCAGATGAGGATGCTGACCTGGAAAAATGCAAGACTTCTATGCGTCGT
GTTGGAAAGATGGAGAAGGACGTCAACAGCGCTTGTATCAGAGCCCAAGATCCTCGTCGT
GAGGGTCTTTGCACAGAACTAAAGGATGAGGAGGCTAACATGAAAAATTGCATCGAAAAG
CTAAAAGTTGTTGAGACAAATAGAGCAGCTGTTGTGTCTGAATTGAAGGAGGCATTGCAG
GAACAGGAATCTGAACTGGAGAAAGTCCGCACTCAGTTACAGCTAGCTGAAGCAATGGTG
CATGAAGCCTCCAACATGCAGCGGAGACTCAAGAATGAGCCAACCATTCCGCTGCCCAAA
TCAGCATCTTCAGTAGAGCCAGGAAAGGTGCTTTCCAATGGGCAAGTAAAGGAGCAGCAG
AAGACAGCTGCTGCTATCCTTGCGGACAAGATTGCAGCATCATCGAACTCTCAGCAGATT
CTGCAATCTGCACTTTCCAAGTTTGCTGCTGAAGAAGCGAAGAATTCATCTGAAGCACGC
TCAGATAAGAGGCAAAAAACTGACCAACTTTCGCAGGTACCAAGCGTCGCGAATGCTGCT
GCTTTCGTTCCAATGCCACAAGTGGTTGCCACAGCAGCTCAGCAGCAGCCCCAGGCAATG
TTAGTGCAACAAGCACCTATGCAGAGCCAATCCCCTGCATCTCAGCCTCAGTACAATATC
TACCAGGCCTCTCCCCAGCAGTTTGTCCCTCAGCCTGGAGGTGTAATGATGGGCATGCCT
TACAACATGAGCACCATGGCCCCGCCACCTCCGCCTCCACCACCCCAGATGATGAACCTA
GGAAGGCCCTCACCTTCAGCTCCACAGCCTCAAATGGCTGTCATGCCGCAGAGCCAGCCA
CCAACTCCACCGATGCTTCAGCAGCAGATGCCAATGAACCTAGCGCCTCAGATGCAGTTT
GCCCTTCAGCCGCCTGGTATTCCACCTTTCAGGCCCTTGCAGCCACCTCCTGGGATGCAA
TACTTCCATCCCCAATCTCAGTGA

Peptide Sequence

PEP ID

EES12937
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57521478:57524467:-1 gene:SORBI_3006G233000 transcript:EES12937 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNSAFSEDILADKLAKLNNTQQCIETLSHWCIYHRKNAEQIVQTWDKQFHSSGKEQMVPF
LYLANDILQNSKRNGTEFVEEFWKVLPGALKNVSENGDDRGKKVASRLVDIWQERRVFGS
RAGGIKDVMLGAAPLPDLDMTKKRSHSSSIRIVKRDSRSVKLRLGIGGTAERIVSALHTV
LSEQADEDADLEKCKTSMRRVGKMEKDVNSACIRAQDPRREGLCTELKDEEANMKNCIEK
LKVVETNRAAVVSELKEALQEQESELEKVRTQLQLAEAMVHEASNMQRRLKNEPTIPLPK
SASSVEPGKVLSNGQVKEQQKTAAAILADKIAASSNSQQILQSALSKFAAEEAKNSSEAR
SDKRQKTDQLSQVPSVANAAAFVPMPQVVATAAQQQPQAMLVQQAPMQSQSPASQPQYNI
YQASPQQFVPQPGGVMMGMPYNMSTMAPPPPPPPPQMMNLGRPSPSAPQPQMAVMPQSQP
PTPPMLQQQMPMNLAPQMQFALQPPGIPPFRPLQPPPGMQYFHPQSQ

Transcript Sequence

Transcript ID

EES12937
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57521478:57524467:-1 gene:SORBI_3006G233000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTTAGTTCTTACCTCTCCAAACCCTAGCCTCCCTGATCCATCCGCTCCTCGAAATTTCG
GCGGCTGATGCCTCCGCCATCGGCGCCGTGGTCGCCTAGCAGCTCTTCTATCTAGGTTTC
GTCGGTCCCTCTTCCTCACCCCGCCCCCAAGATCTGCGCGACGTTTTGAGCTCTCCGTGC
TGTTCGGGCGGCCATGAACAGCGCGTTCAGCGAGGACATACTCGCTGACAAGCTCGCCAA
GCTCAACAACACGCAGCAATGCATCGAGACACTGTCGCATTGGTGCATTTACCATAGAAA
GAATGCAGAGCAAATTGTTCAGACTTGGGACAAGCAGTTCCACAGCTCTGGCAAGGAGCA
GATGGTCCCTTTCCTTTATCTTGCTAATGACATCTTACAGAACAGCAAGCGCAACGGGAC
AGAGTTTGTAGAAGAATTTTGGAAAGTTCTCCCTGGGGCGCTTAAAAATGTAAGCGAGAA
TGGTGACGACCGTGGGAAGAAGGTGGCATCTAGGCTGGTTGACATATGGCAAGAAAGGAG
AGTTTTCGGTTCACGTGCTGGGGGCATCAAGGATGTGATGCTTGGGGCAGCTCCCCTTCC
TGATTTAGATATGACCAAAAAGCGCTCTCACAGTTCTTCAATAAGGATTGTTAAAAGAGA
TTCGCGTTCTGTGAAACTTAGACTAGGCATTGGAGGAACTGCAGAGAGGATTGTATCTGC
ATTGCACACTGTTCTCAGTGAACAAGCAGATGAGGATGCTGACCTGGAAAAATGCAAGAC
TTCTATGCGTCGTGTTGGAAAGATGGAGAAGGACGTCAACAGCGCTTGTATCAGAGCCCA
AGATCCTCGTCGTGAGGGTCTTTGCACAGAACTAAAGGATGAGGAGGCTAACATGAAAAA
TTGCATCGAAAAGCTAAAAGTTGTTGAGACAAATAGAGCAGCTGTTGTGTCTGAATTGAA
GGAGGCATTGCAGGAACAGGAATCTGAACTGGAGAAAGTCCGCACTCAGTTACAGCTAGC
TGAAGCAATGGTGCATGAAGCCTCCAACATGCAGCGGAGACTCAAGAATGAGCCAACCAT
TCCGCTGCCCAAATCAGCATCTTCAGTAGAGCCAGGAAAGGTGCTTTCCAATGGGCAAGT
AAAGGAGCAGCAGAAGACAGCTGCTGCTATCCTTGCGGACAAGATTGCAGCATCATCGAA
CTCTCAGCAGATTCTGCAATCTGCACTTTCCAAGTTTGCTGCTGAAGAAGCGAAGAATTC
ATCTGAAGCACGCTCAGATAAGAGGCAAAAAACTGACCAACTTTCGCAGGTACCAAGCGT
CGCGAATGCTGCTGCTTTCGTTCCAATGCCACAAGTGGTTGCCACAGCAGCTCAGCAGCA
GCCCCAGGCAATGTTAGTGCAACAAGCACCTATGCAGAGCCAATCCCCTGCATCTCAGCC
TCAGTACAATATCTACCAGGCCTCTCCCCAGCAGTTTGTCCCTCAGCCTGGAGGTGTAAT
GATGGGCATGCCTTACAACATGAGCACCATGGCCCCGCCACCTCCGCCTCCACCACCCCA
GATGATGAACCTAGGAAGGCCCTCACCTTCAGCTCCACAGCCTCAAATGGCTGTCATGCC
GCAGAGCCAGCCACCAACTCCACCGATGCTTCAGCAGCAGATGCCAATGAACCTAGCGCC
TCAGATGCAGTTTGCCCTTCAGCCGCCTGGTATTCCACCTTTCAGGCCCTTGCAGCCACC
TCCTGGGATGCAATACTTCCATCCCCAATCTCAGTGACAGTTTTGGTAGCCCAGCCCTGT
TAAACTTTTTGACAGGTTTTCGATTTAGCGTTGACTGGTAGGCAGGATCTGACTTGCTGT
AGAGTATACTGTTTGTGCTGTTCATTTCACCATGTTGTACTGTACATGTAATGCGAGGAG
AGTTAAAGAGCGAGGAGAGTAAAAGGAAGATTAAAGATTCACATAGGCCTGTTTCGTTCT
CGTACAGCTGCACCGTATATGATTTAATGGGGGAACCGAATTTTAGAAAATGGAGGTTGT
TGGTAGATTGTATTTGCGGCTGCAAGTGAGGTGACTTTTCTCTT