Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12936
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57508489:57515009:-1 gene:SORBI_3006G232800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTGCGCCGGTGCATGCGGGATCTGCGCCCGCTGCGGTCTCTCGCGAGGGTCCCCAGA
CCGATCTCCGGCGAGAGTCCAACATTCCTTAAATCTAGAAGCAACTCAACAAAGGCATCT
CCAAAGAGTTCTACACAGAATGCCGCCCCAGGTCCTCAAGGACAACCCTCTCAGTCAGGA
AGTAATGTTTCAAAGCTTGTTCTTGGAACTCTTGTGGTTGGTGCAGCAGCTATGGGTGCA
CATCAACTTGGTTATATAGATCTTGAATTTAAGGACAAGAAATTGCCTTTTAGCTTAAAG
AAGGAAGATGCTGTAAAGGTGTATGAAGATCTGAAGATTCCTTCTGAACAAAAGGTTGGC
CAGACACAAAACGTGTCAGGACCAAACACTGAGATTGTTCAAGAGGGTAATAATGAGGCT
AATACTCCAAAGGACGTTCGAAATGACAGGGTGGGGGCACCAGAGGTTCCAACCAATGGG
GATCAGCCTGTTCCTGCAGAGGAAAAGAAATCAGAAACCCTAGCCCATGAGACACATCCA
GTTCCAGATGAACATGGATCTGATACTAAAATGCCATCTGAAGATTCTACAGCATTTGAG
CTAAAGACAGTTCCCGTCGATGATAATGAATCTGGTGAAGTTCCTCATGAACAGCAAACT
GATAAGGCAGACAGCACAGTTCCTCCTGTACAGTCAACCCCAACAACAGTTAGTACTTAT
GATCACCCCACAGGTCCAGATGTACCAAAGGATCTCACTGGAGCTGGTGCTGTTGAACAG
AAATCTCTTGCTGAGACATATTTACTGCAAGATGAACCTGATGTTTCAAAAGATGCAACC
GTTAAGGAAAAAAGAAGTGATGAAGTTATTCGTGAAAAAACTTCTGAAGATGGTAAGATT
GTACTTGATATCATTGAGGCTATTCATGCTGCCGAAAAGAAGCAGGCAGATGTAGATGCA
TACATGTATTCAGAAGAGAGAAGAAAGTTGAAGGAAAAGTATGAAAAGGAGCTGAAAGAC
ACCAGGGCCAGGGAACTAATGTATGCAGAGGAGGCAGCAATTCTCGATAAGGAGCTAAAG
AAAGAGAAACTGAAGAATGCTGCTGCAATAAAGGAACTGCAAGAAAAGGCTGAACAAAAA
TTGCAGGATGAGCTGCAGAGGAAGGATGAAGAAACAAGCCAACAAATTGAGAAGGCTCAA
GAGATAGCAAAAGCTGAACTGGCTGCAGCTGTTGCAAAAGAGAAAGCATCCCAGATTGAA
CAGATCGCTGAAGCAAACCTCAATATTGATGCGCTGTGTATGGCATTCTATGCACGATCT
GAAGAAGCTAGGCAAAGTCATTCAGTTCATAAGCTTGCTCTGGGCACTCTTGCTTTGGAA
CACGCTTTATCCAGTGGATCACCAATCCGCTCAGAAGTGGAGCTATTGCGTAAATCTGTT
GAAGGCATTGACAAAGATTCACTGTTAGAATTGGCTCTTTCGTCACTCCCGGAAGATGTT
TTAGATTATGGATCAGATACACGGATAGGGTTGAAGCAAATGTTTAACTCCTTGAAGGAA
ACTATCAGACATTTCAGCCTTCTACCAGCAGGTGGTGGTGGAATCCTGGCACATGCTGTT
GCTCGTGTTGCTTCTTCAATCAAGATTAAAGGTGATAACGCTGGAGATGGCATTGAGTCT
CTTATAAACAAAGTAGAAAGCTTGATTGTGGATGGAGACTTGAGTACAGCAGCTGATGCC
TTGGAGAAAGGGTTACATGGAACTGAAGCAGAGGAGATAGCTACCGAGTGGGTGAAGCAA
GCCAGGAAGCGCGCCATTGCGGAGCAGACACTTGCGCTCCTTCACGCTTGTGCTTCTTCG
ACCACGTTCTCATGA

Peptide Sequence

PEP ID

EES12936
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57508489:57515009:-1 gene:SORBI_3006G232800 transcript:EES12936 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLRRCMRDLRPLRSLARVPRPISGESPTFLKSRSNSTKASPKSSTQNAAPGPQGQPSQSG
SNVSKLVLGTLVVGAAAMGAHQLGYIDLEFKDKKLPFSLKKEDAVKVYEDLKIPSEQKVG
QTQNVSGPNTEIVQEGNNEANTPKDVRNDRVGAPEVPTNGDQPVPAEEKKSETLAHETHP
VPDEHGSDTKMPSEDSTAFELKTVPVDDNESGEVPHEQQTDKADSTVPPVQSTPTTVSTY
DHPTGPDVPKDLTGAGAVEQKSLAETYLLQDEPDVSKDATVKEKRSDEVIREKTSEDGKI
VLDIIEAIHAAEKKQADVDAYMYSEERRKLKEKYEKELKDTRARELMYAEEAAILDKELK
KEKLKNAAAIKELQEKAEQKLQDELQRKDEETSQQIEKAQEIAKAELAAAVAKEKASQIE
QIAEANLNIDALCMAFYARSEEARQSHSVHKLALGTLALEHALSSGSPIRSEVELLRKSV
EGIDKDSLLELALSSLPEDVLDYGSDTRIGLKQMFNSLKETIRHFSLLPAGGGGILAHAV
ARVASSIKIKGDNAGDGIESLINKVESLIVDGDLSTAADALEKGLHGTEAEEIATEWVKQ
ARKRAIAEQTLALLHACASSTTFS

Transcript Sequence

Transcript ID

EES12936
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57508489:57515009:-1 gene:SORBI_3006G232800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTCCAGGGGCCTTGAACTATCCCCAACTTTTTCTCCAAGCGTTCATTCAGGAAGCTCTC
CGGCGACGCGCCGCTCACCCCCTTCGCCTCCCCTCCCCGCCGCCGCCTCTTCCTTGCCGC
TGCCGCCGTCGCGTGGCACGGGGCGGTGGCCGTGCAGAGCGATCGGGTCCGCATCGCTCG
ACTGCCCCTCCACCTCCTCATCCTCAGTCCAGCGGCGAGAAGAACAAGGGGCGGTGGTCT
CCATTGACATCGCCCACCATGCTGCGCCGGTGCATGCGGGATCTGCGCCCGCTGCGGTCT
CTCGCGAGGGTCCCCAGACCGATCTCCGGCGAGAGTCCAACATTCCTTAAATCTAGAAGC
AACTCAACAAAGGCATCTCCAAAGAGTTCTACACAGAATGCCGCCCCAGGTCCTCAAGGA
CAACCCTCTCAGTCAGGAAGTAATGTTTCAAAGCTTGTTCTTGGAACTCTTGTGGTTGGT
GCAGCAGCTATGGGTGCACATCAACTTGGTTATATAGATCTTGAATTTAAGGACAAGAAA
TTGCCTTTTAGCTTAAAGAAGGAAGATGCTGTAAAGGTGTATGAAGATCTGAAGATTCCT
TCTGAACAAAAGGTTGGCCAGACACAAAACGTGTCAGGACCAAACACTGAGATTGTTCAA
GAGGGTAATAATGAGGCTAATACTCCAAAGGACGTTCGAAATGACAGGGTGGGGGCACCA
GAGGTTCCAACCAATGGGGATCAGCCTGTTCCTGCAGAGGAAAAGAAATCAGAAACCCTA
GCCCATGAGACACATCCAGTTCCAGATGAACATGGATCTGATACTAAAATGCCATCTGAA
GATTCTACAGCATTTGAGCTAAAGACAGTTCCCGTCGATGATAATGAATCTGGTGAAGTT
CCTCATGAACAGCAAACTGATAAGGCAGACAGCACAGTTCCTCCTGTACAGTCAACCCCA
ACAACAGTTAGTACTTATGATCACCCCACAGGTCCAGATGTACCAAAGGATCTCACTGGA
GCTGGTGCTGTTGAACAGAAATCTCTTGCTGAGACATATTTACTGCAAGATGAACCTGAT
GTTTCAAAAGATGCAACCGTTAAGGAAAAAAGAAGTGATGAAGTTATTCGTGAAAAAACT
TCTGAAGATGGTAAGATTGTACTTGATATCATTGAGGCTATTCATGCTGCCGAAAAGAAG
CAGGCAGATGTAGATGCATACATGTATTCAGAAGAGAGAAGAAAGTTGAAGGAAAAGTAT
GAAAAGGAGCTGAAAGACACCAGGGCCAGGGAACTAATGTATGCAGAGGAGGCAGCAATT
CTCGATAAGGAGCTAAAGAAAGAGAAACTGAAGAATGCTGCTGCAATAAAGGAACTGCAA
GAAAAGGCTGAACAAAAATTGCAGGATGAGCTGCAGAGGAAGGATGAAGAAACAAGCCAA
CAAATTGAGAAGGCTCAAGAGATAGCAAAAGCTGAACTGGCTGCAGCTGTTGCAAAAGAG
AAAGCATCCCAGATTGAACAGATCGCTGAAGCAAACCTCAATATTGATGCGCTGTGTATG
GCATTCTATGCACGATCTGAAGAAGCTAGGCAAAGTCATTCAGTTCATAAGCTTGCTCTG
GGCACTCTTGCTTTGGAACACGCTTTATCCAGTGGATCACCAATCCGCTCAGAAGTGGAG
CTATTGCGTAAATCTGTTGAAGGCATTGACAAAGATTCACTGTTAGAATTGGCTCTTTCG
TCACTCCCGGAAGATGTTTTAGATTATGGATCAGATACACGGATAGGGTTGAAGCAAATG
TTTAACTCCTTGAAGGAAACTATCAGACATTTCAGCCTTCTACCAGCAGGTGGTGGTGGA
ATCCTGGCACATGCTGTTGCTCGTGTTGCTTCTTCAATCAAGATTAAAGGTGATAACGCT
GGAGATGGCATTGAGTCTCTTATAAACAAAGTAGAAAGCTTGATTGTGGATGGAGACTTG
AGTACAGCAGCTGATGCCTTGGAGAAAGGGTTACATGGAACTGAAGCAGAGGAGATAGCT
ACCGAGTGGGTGAAGCAAGCCAGGAAGCGCGCCATTGCGGAGCAGACACTTGCGCTCCTT
CACGCTTGTGCTTCTTCGACCACGTTCTCATGATTTTGACAAGCCATTTTTTTTCCTTCC
TTTTGTTCGACTGGATTTTGCCGGTTTCGGTACTCTGTGCAACCGCGTATTTTTCCCAGA
CCATGTTGCAAATGCGTGGATGGTGAACGAGAAAATCAGATACAAATACTATAGGAGCCA
CTCGGTCTCAAAGTGGGCCCCTGCCTAACTTTCCTCATGTAAACAGAGCTAATAAGTTTT
GCCCTGTAGCTACTTGCTGTTCTTGACATTGTAGTGGCCAGTTAAAGCATTGTTTTTGGT
ACCATTGTT