Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12790
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:55451162:55454760:-1 gene:SORBI_3006G204200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGGCCAGCCGCTCCATCTCCTCCTCGCCCAGCCCCACCACCCTCCCCTCCGCGGT
CTCATCCCCAACCGCCCTACTCACTACCTGCCCACCTCCCGCCTCCGATTCCGCGTACAC
CGTCGCAAGCCGAAGCAGCTCGCCGCAGTGCCTTCGAGACGTCCATCGGGCAGCCAGGCC
GACGCACCTGGCCGTAGCGGCTGGGAGCGGGTGCCGAACGCGGTGGCGGCGGCGGTGTTC
CAGCTGGCCGTATGCTCGCTCCTTTTTCTCTTCCCCAACCGTGCCCGAGTCCTCGCGCTC
CCGCCTCCTCCGGGCGCCGCTGCGGTGGTTGAGGCGACGCAGGAGGAGGAGGACAAGGAG
TGGGAGGCTGCGCTGCAGAAGTGGAAGACCAAGACCTACGCGCTCTCGGTGCCCCTCCGG
GTGGTCGCGCTCCGCGGCTCCTTCCCTCCATCTTGGATTAAGGATTTCGTTGAAGTTCAG
GGGAAGAGGCTCAAATTCAGTCCCGAGCTCCGTGCTAATCTTGATGGGATCTTCTCTGAG
ATGTCACAATGTATGGACAAGGGTCAAGTTCAGCCAAAGTCCGCAATGGCTGCTGATGCC
GTTACCCTTGGGGACTCCTGGCTCGGCTATGCCATCCGCCAGGGATTGCTAGAGCCTGTC
AAGAATGCTGAAGAACAGGATTGGTTTCGTAGCCTGAGTGACAGATGGAAGGTTCATTTG
TGCAGGAACCAGAATGGAGAAGCAGATCCTAATGGTACAATATGGGGAGTTCCATACAGA
TGGGGCACCATGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGACATAATCTGAAGCCA
ATACAGGATTGGGAGGACTTGTGGAGGCCTGAGCTTGCCGGCAGGATTTCAATGGTCGAT
TCTCCTAGAGAGATTATTGGTGCAGTTCTGAAGCATCTGGGGTCATCATATAACACAGTT
GATATGGAAATAGATGTCAATGGTGGTAGAGAAGCAGTCCTAAATAGCTTTACACAACTA
CAGAAGCAGGTCCAACTATTCGATAGCATGGACTATCTGAAATCATTTAGTGTTGGAGAT
GTATGGGTTGCAGTGGGTTGGAGCAGCGATGTGATCCCTGCTGCAAAGCGAATGTCTAAT
GTCGCGGTGGTTGTTCCCAAGTCAGGCAGCAGCATATGGGCTGATCTATGGGCAATACCA
TGCGCGACAAGATTTCAGACTGACCAAATCGGTAGCCGAACCAGAGGCCCATCTCCACTG
ATCCACCAGTGGTTCGACTTCTGCCTGCAGAGTGCTAGGAGCCTACCCTTCCGCCAAGAC
GTCATCCCCGGAGCATCCCCGCTGTACCTCGAGAACCCTGTGCCAGAGGTCCCTCAAGAT
AAGAACAAGAGGAAGCCGAAGCTGGAGACGAACCTTGTCAGGGGAGTGCCTCCGCCCGAG
ATCCTGGAGAGATGCGAGTTTTTGGAGCCCCTGTCAGGTAAGGCGCTGGAGGATTACCAG
TGGCTGATGTCTAAGGTGCAGAGACCTCGACTTGGTTTTTTTGGGAACGTGTTGCAAAAG
ATGTCAGCTGTACTAGACTTCAAAAGAAGATTTTAG

Peptide Sequence

PEP ID

EES12790
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:55451162:55454760:-1 gene:SORBI_3006G204200 transcript:EES12790 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGQPLHLLLAQPHHPPLRGLIPNRPTHYLPTSRLRFRVHRRKPKQLAAVPSRRPSGSQA
DAPGRSGWERVPNAVAAAVFQLAVCSLLFLFPNRARVLALPPPPGAAAVVEATQEEEDKE
WEAALQKWKTKTYALSVPLRVVALRGSFPPSWIKDFVEVQGKRLKFSPELRANLDGIFSE
MSQCMDKGQVQPKSAMAADAVTLGDSWLGYAIRQGLLEPVKNAEEQDWFRSLSDRWKVHL
CRNQNGEADPNGTIWGVPYRWGTMVIAYKKNKFKRHNLKPIQDWEDLWRPELAGRISMVD
SPREIIGAVLKHLGSSYNTVDMEIDVNGGREAVLNSFTQLQKQVQLFDSMDYLKSFSVGD
VWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSIWADLWAIPCATRFQTDQIGSRTRGPSPL
IHQWFDFCLQSARSLPFRQDVIPGASPLYLENPVPEVPQDKNKRKPKLETNLVRGVPPPE
ILERCEFLEPLSGKALEDYQWLMSKVQRPRLGFFGNVLQKMSAVLDFKRRF

Transcript Sequence

Transcript ID

EES12790
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:55451162:55454760:-1 gene:SORBI_3006G204200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGCTTGTTCAAAAATAAGTTCATGTGGCCTCAAAGTAAAAAATAAGTTCATGTAATACAT
TTGCTCAAAGATATATCTGCTTCAAAAATAAGTTCATGTCATTTTTTTAGAAAAAAAAGT
TCATGTAAAGAGATGAATCACATATATTCACATGTTTGAGCAAAAATGCTTTCAGCTCAG
CTGGCAAGTGGCAAGCGGCCTTGTGCTGGAACAAGTGAACAACTGGATAAGCCCGGCCGC
AGAAGGGCACTGCCCGGACGGCGACGGACTCCGAGAGGGAACCGGGCAGCGCCGCAGCGG
CAATGGAGGGCCAGCCGCTCCATCTCCTCCTCGCCCAGCCCCACCACCCTCCCCTCCGCG
GTCTCATCCCCAACCGCCCTACTCACTACCTGCCCACCTCCCGCCTCCGATTCCGCGTAC
ACCGTCGCAAGCCGAAGCAGCTCGCCGCAGTGCCTTCGAGACGTCCATCGGGCAGCCAGG
CCGACGCACCTGGCCGTAGCGGCTGGGAGCGGGTGCCGAACGCGGTGGCGGCGGCGGTGT
TCCAGCTGGCCGTATGCTCGCTCCTTTTTCTCTTCCCCAACCGTGCCCGAGTCCTCGCGC
TCCCGCCTCCTCCGGGCGCCGCTGCGGTGGTTGAGGCGACGCAGGAGGAGGAGGACAAGG
AGTGGGAGGCTGCGCTGCAGAAGTGGAAGACCAAGACCTACGCGCTCTCGGTGCCCCTCC
GGGTGGTCGCGCTCCGCGGCTCCTTCCCTCCATCTTGGATTAAGGATTTCGTTGAAGTTC
AGGGGAAGAGGCTCAAATTCAGTCCCGAGCTCCGTGCTAATCTTGATGGGATCTTCTCTG
AGATGTCACAATGTATGGACAAGGGTCAAGTTCAGCCAAAGTCCGCAATGGCTGCTGATG
CCGTTACCCTTGGGGACTCCTGGCTCGGCTATGCCATCCGCCAGGGATTGCTAGAGCCTG
TCAAGAATGCTGAAGAACAGGATTGGTTTCGTAGCCTGAGTGACAGATGGAAGGTTCATT
TGTGCAGGAACCAGAATGGAGAAGCAGATCCTAATGGTACAATATGGGGAGTTCCATACA
GATGGGGCACCATGGTCATTGCTTACAAGAAAAACAAGTTCAAAAGACATAATCTGAAGC
CAATACAGGATTGGGAGGACTTGTGGAGGCCTGAGCTTGCCGGCAGGATTTCAATGGTCG
ATTCTCCTAGAGAGATTATTGGTGCAGTTCTGAAGCATCTGGGGTCATCATATAACACAG
TTGATATGGAAATAGATGTCAATGGTGGTAGAGAAGCAGTCCTAAATAGCTTTACACAAC
TACAGAAGCAGGTCCAACTATTCGATAGCATGGACTATCTGAAATCATTTAGTGTTGGAG
ATGTATGGGTTGCAGTGGGTTGGAGCAGCGATGTGATCCCTGCTGCAAAGCGAATGTCTA
ATGTCGCGGTGGTTGTTCCCAAGTCAGGCAGCAGCATATGGGCTGATCTATGGGCAATAC
CATGCGCGACAAGATTTCAGACTGACCAAATCGGTAGCCGAACCAGAGGCCCATCTCCAC
TGATCCACCAGTGGTTCGACTTCTGCCTGCAGAGTGCTAGGAGCCTACCCTTCCGCCAAG
ACGTCATCCCCGGAGCATCCCCGCTGTACCTCGAGAACCCTGTGCCAGAGGTCCCTCAAG
ATAAGAACAAGAGGAAGCCGAAGCTGGAGACGAACCTTGTCAGGGGAGTGCCTCCGCCCG
AGATCCTGGAGAGATGCGAGTTTTTGGAGCCCCTGTCAGGTAAGGCGCTGGAGGATTACC
AGTGGCTGATGTCTAAGGTGCAGAGACCTCGACTTGGTTTTTTTGGGAACGTGTTGCAAA
AGATGTCAGCTGTACTAGACTTCAAAAGAAGATTTTAGAGCCACTGTACTGTACTTGACC
AAGGGTTTTTACTTCGTCGTGCAACTAATTGTTCCGTATGTTTGACGATCACGTTGTTAT
CATTTGCGGCAGTGCTGCGAGACTGTGCGAGTGGTGGAGGCAGAAATGGCCTTGACCGTG
AGGGCCTCAGGGATCAGGCAGTAAGGCTGCCCCGCCGCTCGACGACAACGTTCTGACCTC
TGAGTCTGTCTGAGGCCGATCAATGATCTTGTTTGTGATGGGCATATTATGGCAACGACT
GATCAGGACTTCAGGAGGTCGTGCGGATCATTTTGCACGGTGTACATCATCGTAGGCAGC
CGTGCTGCGTGAAAATGCC