Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12690
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:53885761:53889833:-1 gene:SORBI_3006G183900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAACCATATCTTGAGCTAGCTTCTCCCACCATCACCATCCCTCTCTCGGCCGGGAAA
TTATATCGCGCCGCGCCCGCGAACCTTCTTGTCACCTCGGAGTCGGAGGCCATGGCTTCC
TCCATGGCCTATATAGCTGCCTGCGCCGCGGCATTGGCGACCCTCGTCGTCGCTCTGCTC
CGCTGGGCGTACCGGTGGAGCCACCCCAAGTGCAGGGGCAGGCTGCCGCCGGGCTCCATG
GGCGTCCCTCTCCTGGGCGAGACGATGCAGTTCTTCGCGCCCAACCCGAGCTGCGATGTC
TCACCCTTCGTGAAGGAGAGGGTGAGGCGGTACGGGAGCATCTTCAAGACGAGCGTCGTG
GGGCGGCAGGTGGTGGTGTCGGCGGACCCGGACATGAACTACTTCGTGTTCCAGCAGGAA
GGGAAGCTGTTCGAGAGCTGGTACCCGGACACCTTCACCGAGATCTTCGGCCGCGACAAC
GTCGGCTCCCTGCACGGATTCATGTACAAGTACCTCAAGACCCTGGTGCTCCGCCTCTAC
GGCCAGGAGAACCTCAAGGCGGTGCTCCTCGCCGAGACGGACGCCGCCTGCCGCCGCAGC
CTCGCGTCGTGGGCGGCGCAGCCCAGCGTCGAGCTCAAGGAAGGCCTCTCCACAATGATA
TTTGATCTTACCGCCAAGAAGCTGATCGGCTACGAGCCGTCCAAGTCGTCCGAGAGCCTG
AGGAAGAACTTCGTGGCGTTCATCCGCGGCCTGATTTCTTTCCCCGTCAACATCCCCGGC
ACGGCCTACCATGAATGCATGGAGGGGCGGAAGAAGGCGATGAAGGTGCTCAGGGGCATG
ATGAAGGAGCGGATGGCGGATCCCGAGCGGCGGTGCGATGACTTCTTCGACCACGTGATC
CAGGAACTTCGGAGGGAGAAGCCGCTGCTGACGGAGACCATCGCTCTGGACCTCATGTTC
GTGCTCCTCTTCGCCAGCTTCGAGACCACGGCGCTGGCGCTCACCCTCGGCGTCAAGCTC
CTCACCGAGAACCCCAAGGTCGTCGACGCGTTGAGGGAGGAACACGACGCGATCGCCAAG
AACAGGAAGGACCCGGATGCCCCCGTCACGTGGGCCGAGTACAGATCGATGACCTTCACC
AATCAGGTCATCATGGAGATGGTGAGGCTTGCGAACATCGTGCCGGGTATATTTCGAAAG
GCCCTACAAGATGTTGAGATTAAAGGCTATACGATTCCGGCAGGATGGGGTGTCATGGTG
TGCCCACCGGCAGTGCACTTAAACCCTGACATCTATGAAGATCCGTTGGCGTTCAACCCA
TGGAGGTGGCAGGGCAAACCTGAAATCACCGGTGGAACGAAACATTTCATGGCGTTTGGA
GGTGGCCTCAGGTTTTGCGTTGGGACTGATCTGAGCAGGGTCTTGATGGCAACATTCATC
CACACCTTGGTTACAAAATACAGTTGGAGGACGGTAAAAGGAGGGAACATAGTCCGGACC
CCCGGTCTCAGCTTTCCTGATGGCTTCCACATCCAGCTTTTTCCTAGAAATTGA

Peptide Sequence

PEP ID

EES12690
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:53885761:53889833:-1 gene:SORBI_3006G183900 transcript:EES12690 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQPYLELASPTITIPLSAGKLYRAAPANLLVTSESEAMASSMAYIAACAAALATLVVALL
RWAYRWSHPKCRGRLPPGSMGVPLLGETMQFFAPNPSCDVSPFVKERVRRYGSIFKTSVV
GRQVVVSADPDMNYFVFQQEGKLFESWYPDTFTEIFGRDNVGSLHGFMYKYLKTLVLRLY
GQENLKAVLLAETDAACRRSLASWAAQPSVELKEGLSTMIFDLTAKKLIGYEPSKSSESL
RKNFVAFIRGLISFPVNIPGTAYHECMEGRKKAMKVLRGMMKERMADPERRCDDFFDHVI
QELRREKPLLTETIALDLMFVLLFASFETTALALTLGVKLLTENPKVVDALREEHDAIAK
NRKDPDAPVTWAEYRSMTFTNQVIMEMVRLANIVPGIFRKALQDVEIKGYTIPAGWGVMV
CPPAVHLNPDIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSRVLMATFI
HTLVTKYSWRTVKGGNIVRTPGLSFPDGFHIQLFPRN

Transcript Sequence

Transcript ID

EES12690
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:53885761:53889833:-1 gene:SORBI_3006G183900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACAGAACCTCCTTCGTCTCCCCGTAGCACATGCAACCATATCTTGAGCTAGCTTCTCCCA
CCATCACCATCCCTCTCTCGGCCGGGAAATTATATCGCGCCGCGCCCGCGAACCTTCTTG
TCACCTCGGAGTCGGAGGCCATGGCTTCCTCCATGGCCTATATAGCTGCCTGCGCCGCGG
CATTGGCGACCCTCGTCGTCGCTCTGCTCCGCTGGGCGTACCGGTGGAGCCACCCCAAGT
GCAGGGGCAGGCTGCCGCCGGGCTCCATGGGCGTCCCTCTCCTGGGCGAGACGATGCAGT
TCTTCGCGCCCAACCCGAGCTGCGATGTCTCACCCTTCGTGAAGGAGAGGGTGAGGCGGT
ACGGGAGCATCTTCAAGACGAGCGTCGTGGGGCGGCAGGTGGTGGTGTCGGCGGACCCGG
ACATGAACTACTTCGTGTTCCAGCAGGAAGGGAAGCTGTTCGAGAGCTGGTACCCGGACA
CCTTCACCGAGATCTTCGGCCGCGACAACGTCGGCTCCCTGCACGGATTCATGTACAAGT
ACCTCAAGACCCTGGTGCTCCGCCTCTACGGCCAGGAGAACCTCAAGGCGGTGCTCCTCG
CCGAGACGGACGCCGCCTGCCGCCGCAGCCTCGCGTCGTGGGCGGCGCAGCCCAGCGTCG
AGCTCAAGGAAGGCCTCTCCACAATGATATTTGATCTTACCGCCAAGAAGCTGATCGGCT
ACGAGCCGTCCAAGTCGTCCGAGAGCCTGAGGAAGAACTTCGTGGCGTTCATCCGCGGCC
TGATTTCTTTCCCCGTCAACATCCCCGGCACGGCCTACCATGAATGCATGGAGGGGCGGA
AGAAGGCGATGAAGGTGCTCAGGGGCATGATGAAGGAGCGGATGGCGGATCCCGAGCGGC
GGTGCGATGACTTCTTCGACCACGTGATCCAGGAACTTCGGAGGGAGAAGCCGCTGCTGA
CGGAGACCATCGCTCTGGACCTCATGTTCGTGCTCCTCTTCGCCAGCTTCGAGACCACGG
CGCTGGCGCTCACCCTCGGCGTCAAGCTCCTCACCGAGAACCCCAAGGTCGTCGACGCGT
TGAGGGAGGAACACGACGCGATCGCCAAGAACAGGAAGGACCCGGATGCCCCCGTCACGT
GGGCCGAGTACAGATCGATGACCTTCACCAATCAGGTCATCATGGAGATGGTGAGGCTTG
CGAACATCGTGCCGGGTATATTTCGAAAGGCCCTACAAGATGTTGAGATTAAAGGCTATA
CGATTCCGGCAGGATGGGGTGTCATGGTGTGCCCACCGGCAGTGCACTTAAACCCTGACA
TCTATGAAGATCCGTTGGCGTTCAACCCATGGAGGTGGCAGGGCAAACCTGAAATCACCG
GTGGAACGAAACATTTCATGGCGTTTGGAGGTGGCCTCAGGTTTTGCGTTGGGACTGATC
TGAGCAGGGTCTTGATGGCAACATTCATCCACACCTTGGTTACAAAATACAGTTGGAGGA
CGGTAAAAGGAGGGAACATAGTCCGGACCCCCGGTCTCAGCTTTCCTGATGGCTTCCACA
TCCAGCTTTTTCCTAGAAATTGAAATTGGCCCTTTTTTAAACCTCTGACAAGGTTGTGCA
TGTAATTAAAGCGGGGGGTTTATTTATTTTTTGAAACGAAAAAGAGGGGGTGAGGTAGGT
CTCTTAGGGGCAACAGTAAAGGATTGGAAAATCATATACTTAGTCTAGCGTAGTAGTGTT
AGGATAGACATCACTAGTTACAAGTTCAGTCATATTACTGGGTACTACCTCTAATCTTTG
GAAGGGGTTTTTGTACTTGGTTTGTTTGTTTTCCATGTGGTTAGTAATCTACCCATGTGT
TGTATGTATATCTGATTATACATGTCTAATGAAAGAAGAATACAGGAGCTATGCGTAAAG
ATGTTTGTGGAGCCATACGAAGCTCCATTTTGTCTCCAGCTCGTCTCCAGGCGCATAGCA
TCCCCAGCTTGTTCAGATATGGTAGAGTTAATGACTGAAAATAGCCTAGTATTTAGGTCA
GAATCAGCGGTTACTGTTCAAATATATTATGTCCCTGGGCAGAGGA