Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12658
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:53304076:53307215:-1 gene:SORBI_3006G178700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGATCGCCCCCACGGAGAAAGAGATGCTCAGCCACCGGCGGTACAAGCGATCGTCC
GGCGATTCCCGGTCCGTGCGCCCACCGGCTAGGTCCGAATCCTCGCATCTCAATGCACCG
CTCGTCATGCGGATCTCGTCCACGGAGACAGAGATTCCCGGTCACGGGCGGTTGAAGCGA
TCCTCGTCGTCCAAGGATGCCAGGGCCGACGCCGACGCCGACGCCTCGCATCACGAAGCA
GCGCGGGCCATGCCGATCTCGTCGACAGAGATAGAGGTTTCCGGCCAGGGGCGGTTGAAG
CGGCCGTCGTCGTCCGAATCCGGCAGCGCCTCCTATCCAACCTGGGTGATTCTGAATCGG
GTCGGCGTCCGGAGGGACTCCTTCGACGGCGACGGCACCACGTCAGCGGTCTCCTACACC
TCCGGCGGCGAGCAGATCTCCGTCTCCTTCGTGCTCGAGAAGCCGCCGCGGACTTCCCTC
ATCACCCTCGACTGGCCACAAGGGCCCAGCCCGTCGGAGGGGAGCACATCAAAGCCGCGC
GTCGTCGCCGCGCACCGCAACGTCGTGCTGCTCGAGATCTCCCGCGCCAACTACCTTCGT
CCTGCTTCAATCGACTTCTTCGTCTACAAGGCCAGCGGCAGCGGGGGCCCCTCCCTGACG
CGCTTACCCGTTTGCTACTGGAAGGGGCCTTGGAACGCAGACAGCCCTCGGCCGCGCATC
ATGGGCAAGTACTCCACGGGTCTTCTGTCCTGCAGCGATGATTTCTTCGTTGTAGCTGAT
CTCGCGAGAGGGTCACCTCAACCATCCCTAGTTGACATCTACCTCATGTGCTCTGGCTCC
AACGACTGGAAAGTCTTCAGGGATGTGCCTATCCACAATGCTGACAGCGTCCCACATTTG
TCCTGGTGGTCAACTGATGTGGTGTTACCCTGGCGCCATCACTACTTGATCTGGGTGGAC
TATTTCAGAGGGATGATTTTCGCACGCATCACACATCCAGGAAATGGCATTGACCTGCAG
GAGCCTGTTCTAAGATATGTGCCGCTTCCGGTGGATCCAGTTCAGGGGAACACTTACGAC
AACGACTATGGGCGAGGATGCCCTGCAGCTTCCCGTAGCATTTGTAACACCCACCATGGG
ATCAAGTTTGTCAGTATTAACCAGCGTGGCAGCAGTTTCAGCATCTCCCTGTGGTCATTG
TGTCAGGAAAAATGGAGAGAAGATGCAACGCTGGATGCTGACCAACTTTGGGACCTAGAT
TTTGAAAACCGCCTTACAAAAGTACAACCAGCATTCCCAGTTGTTGACATGGAAAATCCT
GATGCCGTTTGCTTCTTGTTGAATGAGGGCCGATACACTGTTATCCCCGATACCCCAACA
TGGATGATCAAAATTCACATGACAAAGAAGATTCTTCTAGATTCTCATTATTATTCCAAA
GGAAGTCCGTCTTATCAGAAAACCTATACAACTGCGAGGAGGATGTCTGAGGGGCTCACC
TTCATCTCCAGTGGAATGCCAAGTTACCTGTCTGGACAGACCATGGAAAGGGGCTTGATA
AGCTACTAG

Peptide Sequence

PEP ID

EES12658
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:53304076:53307215:-1 gene:SORBI_3006G178700 transcript:EES12658 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPIAPTEKEMLSHRRYKRSSGDSRSVRPPARSESSHLNAPLVMRISSTETEIPGHGRLKR
SSSSKDARADADADASHHEAARAMPISSTEIEVSGQGRLKRPSSSESGSASYPTWVILNR
VGVRRDSFDGDGTTSAVSYTSGGEQISVSFVLEKPPRTSLITLDWPQGPSPSEGSTSKPR
VVAAHRNVVLLEISRANYLRPASIDFFVYKASGSGGPSLTRLPVCYWKGPWNADSPRPRI
MGKYSTGLLSCSDDFFVVADLARGSPQPSLVDIYLMCSGSNDWKVFRDVPIHNADSVPHL
SWWSTDVVLPWRHHYLIWVDYFRGMIFARITHPGNGIDLQEPVLRYVPLPVDPVQGNTYD
NDYGRGCPAASRSICNTHHGIKFVSINQRGSSFSISLWSLCQEKWREDATLDADQLWDLD
FENRLTKVQPAFPVVDMENPDAVCFLLNEGRYTVIPDTPTWMIKIHMTKKILLDSHYYSK
GSPSYQKTYTTARRMSEGLTFISSGMPSYLSGQTMERGLISY

Transcript Sequence

Transcript ID

EES12658
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:53304076:53307215:-1 gene:SORBI_3006G178700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATACACGTCCTCCTCTTCGGGCTGTACGCTAGAGGATTCAAGGTCCATATGTATGCTCGC
AATGCCAACGCACGGCGGCCAGTAGATAGCAGGGTACAAGGCGAGGAGGCCTAGCAGTGG
CACGGGTGCGGGACTTTGTCGGACTTCTGGTGCGGTTCGCCGCCGCCATGCCGATCGCCC
CCACGGAGAAAGAGATGCTCAGCCACCGGCGGTACAAGCGATCGTCCGGCGATTCCCGGT
CCGTGCGCCCACCGGCTAGGTCCGAATCCTCGCATCTCAATGCACCGCTCGTCATGCGGA
TCTCGTCCACGGAGACAGAGATTCCCGGTCACGGGCGGTTGAAGCGATCCTCGTCGTCCA
AGGATGCCAGGGCCGACGCCGACGCCGACGCCTCGCATCACGAAGCAGCGCGGGCCATGC
CGATCTCGTCGACAGAGATAGAGGTTTCCGGCCAGGGGCGGTTGAAGCGGCCGTCGTCGT
CCGAATCCGGCAGCGCCTCCTATCCAACCTGGGTGATTCTGAATCGGGTCGGCGTCCGGA
GGGACTCCTTCGACGGCGACGGCACCACGTCAGCGGTCTCCTACACCTCCGGCGGCGAGC
AGATCTCCGTCTCCTTCGTGCTCGAGAAGCCGCCGCGGACTTCCCTCATCACCCTCGACT
GGCCACAAGGGCCCAGCCCGTCGGAGGGGAGCACATCAAAGCCGCGCGTCGTCGCCGCGC
ACCGCAACGTCGTGCTGCTCGAGATCTCCCGCGCCAACTACCTTCGTCCTGCTTCAATCG
ACTTCTTCGTCTACAAGGCCAGCGGCAGCGGGGGCCCCTCCCTGACGCGCTTACCCGTTT
GCTACTGGAAGGGGCCTTGGAACGCAGACAGCCCTCGGCCGCGCATCATGGGCAAGTACT
CCACGGGTCTTCTGTCCTGCAGCGATGATTTCTTCGTTGTAGCTGATCTCGCGAGAGGGT
CACCTCAACCATCCCTAGTTGACATCTACCTCATGTGCTCTGGCTCCAACGACTGGAAAG
TCTTCAGGGATGTGCCTATCCACAATGCTGACAGCGTCCCACATTTGTCCTGGTGGTCAA
CTGATGTGGTGTTACCCTGGCGCCATCACTACTTGATCTGGGTGGACTATTTCAGAGGGA
TGATTTTCGCACGCATCACACATCCAGGAAATGGCATTGACCTGCAGGAGCCTGTTCTAA
GATATGTGCCGCTTCCGGTGGATCCAGTTCAGGGGAACACTTACGACAACGACTATGGGC
GAGGATGCCCTGCAGCTTCCCGTAGCATTTGTAACACCCACCATGGGATCAAGTTTGTCA
GTATTAACCAGCGTGGCAGCAGTTTCAGCATCTCCCTGTGGTCATTGTGTCAGGAAAAAT
GGAGAGAAGATGCAACGCTGGATGCTGACCAACTTTGGGACCTAGATTTTGAAAACCGCC
TTACAAAAGTACAACCAGCATTCCCAGTTGTTGACATGGAAAATCCTGATGCCGTTTGCT
TCTTGTTGAATGAGGGCCGATACACTGTTATCCCCGATACCCCAACATGGATGATCAAAA
TTCACATGACAAAGAAGATTCTTCTAGATTCTCATTATTATTCCAAAGGAAGTCCGTCTT
ATCAGAAAACCTATACAACTGCGAGGAGGATGTCTGAGGGGCTCACCTTCATCTCCAGTG
GAATGCCAAGTTACCTGTCTGGACAGACCATGGAAAGGGGCTTGATAAGCTACTAGAAAT
ACGACAGGAGATTCCGGTCTGGAGATTGAATACTCAAAGCTCAGCTAGGATGTGCGCTCC
TGCAGTTTTGGAAAGAAACTTGGGCAGATTATGGCATGGCACCACCACATAGTTGGGTTA
AATTATATGTTTCGTACACTCTAAAACATGTTATGGATATGTGCAATTATATTATCTGTT
TTGATGTTAGTATTGTTTCTATATATTTACATTTCTATATTGCTCAACCTGATTACTTTG
AGTAAACAAGTGAGTATTATTCGAGGCCATGAGGTCACAACCTTGGCAAATGGATCTGAA
AAGGAGCAAGATGCAGCCGTTTTTCTTTG