Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12648
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:53213508:53215600:-1 gene:SORBI_3006G177000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGCCGGGGCGTGGGCGGTGGTGGCGGCGGCCGTGGCGCTGTACATGGCGTGGTTC
TGGCGGATGTCGCGCGGGCTCAGCGGGCCGCGGGTGTGGCCGCTGGCCGGCAGCCTCCCG
GGCCTCGTGCAGCACGCCGAGGACATGCACGAGTGGATCGCCGCCAACCTTCGCCGCGCG
GGGGGCACGTACCAGACCTGCATCTTCGCCGTGCCCGGGGTGGCGCGCCGGGGCGGGCTG
GTCACCGTGACGTGCGACCCGCGGAACCTGGAGCACGTCCTCAAGGCGCGCTTCGACAAC
TACCCCAAGGGCCCCTTCTGGCACGGCGTCTTCCGGGACCTGCTCGGCGACGGCATCTTC
AACTCCGACGGCGAGACGTGGGTGGCGCAGCGCAAGACGGCCGCGCTCGAGTTCACCACG
CGCACGCTGCGCACCGCCATGTCGCGCTGGGTGTCGCGATCCATCCACGCCCGCCTCCTC
CCCATCCTGGGCGACGCCGACGCCGACGTCGTCGTCGTCGACCTGCAGGACCTCCTGCTC
CGCCTCACCTTCGACAACATCTGCGGCCTCGCGTTCGGCAAGGACCCCGAGACGCTCGCC
AGGGGCCTCCCCGAGAACGCCTTCGCCTCCGCGTTCGACCGCGCCACGGAGGCCACGCTC
AACCGCTTCATCTTCCCGGAGTGCGTGTGGCGCTTCAAGAAGTGGCTGGGCCTCGGCATG
GAGACCACGCTGGCGCGCAGCGTCCAGCACGTCGACCGGTACCTCTCGGCCGTCATCGGC
GCGCGCAAGCTCGAGCTCACCGGCGGCAAGCAGAACGACGCGTCGGCCACGCCGCACGAC
GACCTCCTCTCGCGCTTCATGCGCAAGGGGACCTACTCCGACGAGTCGCTGCAGCACGTG
GCGCTCAACTTCATCCTCGCCGGCCGCGACACCTCCTCGGTGGCGCTCTCCTGGTTCTTC
TGGCTCGTCTCCACGCACCCGGACGTGGAGCGCAAGGTCGTGCGCGAGCTGTGCGCCGTC
CTGGCCGCGTCCCGCGGCGTCGAGGACCCGGCATTGTGGCTCGCCGCGCCCTTCGACTTC
GACGAGCTCGACCGCCTCGTCTACCTCAAGGCGGCGCTCTCGGAGACGCTCCGCCTGTAC
CCCTCGGTGCCCGAGGACTCCAAGCACGTCGTCGCCGACGACGTGCTCCCGGACGGCACG
TTCGTCCCCGCGGGCTCGTCGGTCACCTACTCCATCTACTCGGCGGGGCGCATGAAGACG
GTGTGGGGGGAGGACTGCCTCGAGTTCCGCCCCGAGCGGTGGCTGTCCGCCGACGGCACC
AGGTTCGAGCCCCACGACTCGTACAGGTTCGTGGCGTTCAACGCCGGCCCGCGGATATGC
CTGGGCAAGGACCTCGCGTACCTGCAGATGAAGAACATCGCCGGGAGCGTGCTCCTCCGC
CACCGCCTCGCCGTCGCGCCGGGCCACCGCGTGGAGCAGAAGATGTCGCTCACGCTGTTC
ATGAAGCACGGGCTCCGGATGGAGGTGCGCCCGCGCGACCTCGGCGCCGTCATCGACGAG
CTCCGCGGCGCCGGGGGGTACGACGCGGCGGCCAGAGCCACCGCGGCCTCTGCCTAG

Peptide Sequence

PEP ID

EES12648
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:53213508:53215600:-1 gene:SORBI_3006G177000 transcript:EES12648 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEAGAWAVVAAAVALYMAWFWRMSRGLSGPRVWPLAGSLPGLVQHAEDMHEWIAANLRRA
GGTYQTCIFAVPGVARRGGLVTVTCDPRNLEHVLKARFDNYPKGPFWHGVFRDLLGDGIF
NSDGETWVAQRKTAALEFTTRTLRTAMSRWVSRSIHARLLPILGDADADVVVVDLQDLLL
RLTFDNICGLAFGKDPETLARGLPENAFASAFDRATEATLNRFIFPECVWRFKKWLGLGM
ETTLARSVQHVDRYLSAVIGARKLELTGGKQNDASATPHDDLLSRFMRKGTYSDESLQHV
ALNFILAGRDTSSVALSWFFWLVSTHPDVERKVVRELCAVLAASRGVEDPALWLAAPFDF
DELDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRMKT
VWGEDCLEFRPERWLSADGTRFEPHDSYRFVAFNAGPRICLGKDLAYLQMKNIAGSVLLR
HRLAVAPGHRVEQKMSLTLFMKHGLRMEVRPRDLGAVIDELRGAGGYDAAARATAASA

Transcript Sequence

Transcript ID

EES12648
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:53213508:53215600:-1 gene:SORBI_3006G177000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGACTTGAGTCTTTCCTTTCCTGCCGAGCCAGCACCCTCATATACGTACCGGTACACGC
TCCTCCCACTCCACGCAGCACACAGGACCCATCCCCGAGCCACTCTCCGGTGCGTGCGGC
GCGCGGGATGGGATCGATCGTCCGTGAATGGATTCTATTATAGCTACTACTAGGGGCAGC
GTCAGTGGAGTGGTGGCGCTCACGTATTCATTGCCGTCCGCGTCGGCTTGAATCGCTGCC
CGTTCCGGTGCGACTGCCCGACTGCTATATAGCCTCGCCCTGCCTCTCGATCACGTCCTG
CACTGCACTGCTCTGCTAGCTACTAACTCACTGCGCTCCATGTGACCTCACTTATTTCTC
CTGTCAGCGCAGCGCAGCAGCAGCCACCTATACCGATCGAGCTTCGCTCGTCCGGTCCGT
CCTCCCGATCGGATCAGCGTCGTGCCGCTCGATCGGCAAACGAAAGCAAGCAAGCGATGG
AGGCCGGGGCGTGGGCGGTGGTGGCGGCGGCCGTGGCGCTGTACATGGCGTGGTTCTGGC
GGATGTCGCGCGGGCTCAGCGGGCCGCGGGTGTGGCCGCTGGCCGGCAGCCTCCCGGGCC
TCGTGCAGCACGCCGAGGACATGCACGAGTGGATCGCCGCCAACCTTCGCCGCGCGGGGG
GCACGTACCAGACCTGCATCTTCGCCGTGCCCGGGGTGGCGCGCCGGGGCGGGCTGGTCA
CCGTGACGTGCGACCCGCGGAACCTGGAGCACGTCCTCAAGGCGCGCTTCGACAACTACC
CCAAGGGCCCCTTCTGGCACGGCGTCTTCCGGGACCTGCTCGGCGACGGCATCTTCAACT
CCGACGGCGAGACGTGGGTGGCGCAGCGCAAGACGGCCGCGCTCGAGTTCACCACGCGCA
CGCTGCGCACCGCCATGTCGCGCTGGGTGTCGCGATCCATCCACGCCCGCCTCCTCCCCA
TCCTGGGCGACGCCGACGCCGACGTCGTCGTCGTCGACCTGCAGGACCTCCTGCTCCGCC
TCACCTTCGACAACATCTGCGGCCTCGCGTTCGGCAAGGACCCCGAGACGCTCGCCAGGG
GCCTCCCCGAGAACGCCTTCGCCTCCGCGTTCGACCGCGCCACGGAGGCCACGCTCAACC
GCTTCATCTTCCCGGAGTGCGTGTGGCGCTTCAAGAAGTGGCTGGGCCTCGGCATGGAGA
CCACGCTGGCGCGCAGCGTCCAGCACGTCGACCGGTACCTCTCGGCCGTCATCGGCGCGC
GCAAGCTCGAGCTCACCGGCGGCAAGCAGAACGACGCGTCGGCCACGCCGCACGACGACC
TCCTCTCGCGCTTCATGCGCAAGGGGACCTACTCCGACGAGTCGCTGCAGCACGTGGCGC
TCAACTTCATCCTCGCCGGCCGCGACACCTCCTCGGTGGCGCTCTCCTGGTTCTTCTGGC
TCGTCTCCACGCACCCGGACGTGGAGCGCAAGGTCGTGCGCGAGCTGTGCGCCGTCCTGG
CCGCGTCCCGCGGCGTCGAGGACCCGGCATTGTGGCTCGCCGCGCCCTTCGACTTCGACG
AGCTCGACCGCCTCGTCTACCTCAAGGCGGCGCTCTCGGAGACGCTCCGCCTGTACCCCT
CGGTGCCCGAGGACTCCAAGCACGTCGTCGCCGACGACGTGCTCCCGGACGGCACGTTCG
TCCCCGCGGGCTCGTCGGTCACCTACTCCATCTACTCGGCGGGGCGCATGAAGACGGTGT
GGGGGGAGGACTGCCTCGAGTTCCGCCCCGAGCGGTGGCTGTCCGCCGACGGCACCAGGT
TCGAGCCCCACGACTCGTACAGGTTCGTGGCGTTCAACGCCGGCCCGCGGATATGCCTGG
GCAAGGACCTCGCGTACCTGCAGATGAAGAACATCGCCGGGAGCGTGCTCCTCCGCCACC
GCCTCGCCGTCGCGCCGGGCCACCGCGTGGAGCAGAAGATGTCGCTCACGCTGTTCATGA
AGCACGGGCTCCGGATGGAGGTGCGCCCGCGCGACCTCGGCGCCGTCATCGACGAGCTCC
GCGGCGCCGGGGGGTACGACGCGGCGGCCAGAGCCACCGCGGCCTCTGCCTAG