Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12606
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:52469639:52478712:-1 gene:SORBI_3006G167600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAAGAGACGGGAAGGAGACTAGGCGCCGGAGCCGCAAGAGATCCCGCGACGCCTCC
CTCTCCCCCTCCTCGGATTCCGACTCCCCTTCCTCGGCGTCCTCCCCAAGCAGCAGCCCT
GAGCGACGGAGCCGCAGCAGCAAGCGGAGTAGATCATCCTCATCGCACCGCCACCGCCAC
CGCCACAGCCGCAAGGACAGCGGCCGGTCGCGGAGCTCCCGCGACGAGGACCGCCGCCGC
CGGCATCGGAGAAGACGGGACCAGGAGAGAAAGCGGCACGGTGGGGATGGTGGCGGGTCC
TCCGACTCCCAATCGTCGGAGGAGGATAGGGCGGAGGAGGCGCGGGAGATCGTCCGAGAT
ATCCTCAGGGAATTGCCGGCCGTAGCCGGAGAGCTTCGCCAGCTTCTCCAAATGATAGAC
AGTGGTGAAGGCATTGATATTTCTGGAATTTCTGACAAGCCATTGGTGAAGCGCTTGAAG
AAACTTTTCCGATCTCTGAGACTGAAAGAAAGTGCAAGTGGGGCTTACTTGCTGCCTCCA
AAAAATGTTCCTACACTTGATATTGTTGGATCATTACTATTAGCAGGTTCCAAACTTTCA
GACAACAAAAGTGAAAAGTCAGTATCACCATATAGAGAAGAACTACCACAGGCTAACTTT
GATGTGCAAAATAAAGATAAAGATGACTCTATTTCCGAAGAGCCGAAAATTATTGGTGTG
GAAGAGGAACCTCCTAAAAGAAGGGTAATCGGTCCTGCAATGCCATCTCGTGAATTACTG
GCTGCAGCAGCTGAAATGACAGAGGCTCTTAGGTGCCGGGATGCTGAACTGGAAGCCGAT
GATGATTTGCTCATAGGCCCCCCACCGCCAGCTGTAGTCGCTGAAGCTGCATCTGCAAAT
GAAGCTGAGCGATTTGAAGAGGTTACTCGAATATTGGCAGCTGACACAAATTCACCTTAT
GATGTTCTGGGGGTAAATTGGAAGATGTCAACTGATAACATGAAGAAAAGGTATTGGAAG
TTGTCCCTTTTAGTGCACCCGGACAAATGTCCTCATCCTTTAGCACAAGAGGCATTCGTG
AAATTAAATAATGCCTTCAAAGACTTACAAGACCCTGATAAGAGAGGTGCAATAGATGAG
AAAATAAAAAAGAAAGAGGAGATGGAACAATTTGAGATTGAGCTTAAAGCAATGCGTGAG
GCTGCGGAATGGAGACGGTTACAAGGTGTATCACTTGCAGGTGATGATGAACTTTTAGCA
GGTCCAAAAGAGTCACAGGCACCTAAGAGAGATGAATGGATGACCACATTGCCACCAGAG
AGAAAAGCAGGAGTGCCGATGCATTCAACTAAATCATTTAGTATGAATGGTAAAGAAGGA
CGTGGAGACACAAGTGTCTGGACTGATACCCCTCTTGATAGAGCACAAAAAGCACAACAA
AGCTATCTAGAAGCCTACAATAAGACAAAGGCGATTGCAGAAGGCGAGGATGTAAAGAGC
AAAAACCCGGATGCTTCAATTGTAGATAAGTACAATACCTCCAAAAGATCAGTGTCTCTT
GTGCAGAAGCACCGAGAGAGTAAAAAGGAGAAAAAGAAACAAAAACAGCACGAGAAAGAA
GAATGGGAGGGAAACCACCCATGGAAGCCATGGGACCGGGAGAAGGATCTGACTGCTGGG
CGCCAAAAGGTAGCTTTAGACCCAGAGAACATGTCACAAGGATTAACTTCCCGTTTCGCA
TCTGGTTCTGTTCAGAGGAACTTCCTGTAA

Peptide Sequence

PEP ID

EES12606
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:52469639:52478712:-1 gene:SORBI_3006G167600 transcript:EES12606 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MARDGKETRRRSRKRSRDASLSPSSDSDSPSSASSPSSSPERRSRSSKRSRSSSSHRHRH
RHSRKDSGRSRSSRDEDRRRRHRRRRDQERKRHGGDGGGSSDSQSSEEDRAEEAREIVRD
ILRELPAVAGELRQLLQMIDSGEGIDISGISDKPLVKRLKKLFRSLRLKESASGAYLLPP
KNVPTLDIVGSLLLAGSKLSDNKSEKSVSPYREELPQANFDVQNKDKDDSISEEPKIIGV
EEEPPKRRVIGPAMPSRELLAAAAEMTEALRCRDAELEADDDLLIGPPPPAVVAEAASAN
EAERFEEVTRILAADTNSPYDVLGVNWKMSTDNMKKRYWKLSLLVHPDKCPHPLAQEAFV
KLNNAFKDLQDPDKRGAIDEKIKKKEEMEQFEIELKAMREAAEWRRLQGVSLAGDDELLA
GPKESQAPKRDEWMTTLPPERKAGVPMHSTKSFSMNGKEGRGDTSVWTDTPLDRAQKAQQ
SYLEAYNKTKAIAEGEDVKSKNPDASIVDKYNTSKRSVSLVQKHRESKKEKKKQKQHEKE
EWEGNHPWKPWDREKDLTAGRQKVALDPENMSQGLTSRFASGSVQRNFL

Transcript Sequence

Transcript ID

EES12606
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:52469639:52478712:-1 gene:SORBI_3006G167600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATTTTGCGTTTTGCCCTCAAACTCAGAAAATTCAAGCTCAAACTCGTGCTGTCGTTCCC
CTCTCCTCCCCCAGCATCCCAAGTTGAGGAAACAGGAGATGGCAAGAGACGGGAAGGAGA
CTAGGCGCCGGAGCCGCAAGAGATCCCGCGACGCCTCCCTCTCCCCCTCCTCGGATTCCG
ACTCCCCTTCCTCGGCGTCCTCCCCAAGCAGCAGCCCTGAGCGACGGAGCCGCAGCAGCA
AGCGGAGTAGATCATCCTCATCGCACCGCCACCGCCACCGCCACAGCCGCAAGGACAGCG
GCCGGTCGCGGAGCTCCCGCGACGAGGACCGCCGCCGCCGGCATCGGAGAAGACGGGACC
AGGAGAGAAAGCGGCACGGTGGGGATGGTGGCGGGTCCTCCGACTCCCAATCGTCGGAGG
AGGATAGGGCGGAGGAGGCGCGGGAGATCGTCCGAGATATCCTCAGGGAATTGCCGGCCG
TAGCCGGAGAGCTTCGCCAGCTTCTCCAAATGATAGACAGTGGTGAAGGCATTGATATTT
CTGGAATTTCTGACAAGCCATTGGTGAAGCGCTTGAAGAAACTTTTCCGATCTCTGAGAC
TGAAAGAAAGTGCAAGTGGGGCTTACTTGCTGCCTCCAAAAAATGTTCCTACACTTGATA
TTGTTGGATCATTACTATTAGCAGGTTCCAAACTTTCAGACAACAAAAGTGAAAAGTCAG
TATCACCATATAGAGAAGAACTACCACAGGCTAACTTTGATGTGCAAAATAAAGATAAAG
ATGACTCTATTTCCGAAGAGCCGAAAATTATTGGTGTGGAAGAGGAACCTCCTAAAAGAA
GGGTAATCGGTCCTGCAATGCCATCTCGTGAATTACTGGCTGCAGCAGCTGAAATGACAG
AGGCTCTTAGGTGCCGGGATGCTGAACTGGAAGCCGATGATGATTTGCTCATAGGCCCCC
CACCGCCAGCTGTAGTCGCTGAAGCTGCATCTGCAAATGAAGCTGAGCGATTTGAAGAGG
TTACTCGAATATTGGCAGCTGACACAAATTCACCTTATGATGTTCTGGGGGTAAATTGGA
AGATGTCAACTGATAACATGAAGAAAAGGTATTGGAAGTTGTCCCTTTTAGTGCACCCGG
ACAAATGTCCTCATCCTTTAGCACAAGAGGCATTCGTGAAATTAAATAATGCCTTCAAAG
ACTTACAAGACCCTGATAAGAGAGGTGCAATAGATGAGAAAATAAAAAAGAAAGAGGAGA
TGGAACAATTTGAGATTGAGCTTAAAGCAATGCGTGAGGCTGCGGAATGGAGACGGTTAC
AAGGTGTATCACTTGCAGGTGATGATGAACTTTTAGCAGGTCCAAAAGAGTCACAGGCAC
CTAAGAGAGATGAATGGATGACCACATTGCCACCAGAGAGAAAAGCAGGAGTGCCGATGC
ATTCAACTAAATCATTTAGTATGAATGGTAAAGAAGGACGTGGAGACACAAGTGTCTGGA
CTGATACCCCTCTTGATAGAGCACAAAAAGCACAACAAAGCTATCTAGAAGCCTACAATA
AGACAAAGGCGATTGCAGAAGGCGAGGATGTAAAGAGCAAAAACCCGGATGCTTCAATTG
TAGATAAGTACAATACCTCCAAAAGATCAGTGTCTCTTGTGCAGAAGCACCGAGAGAGTA
AAAAGGAGAAAAAGAAACAAAAACAGCACGAGAAAGAAGAATGGGAGGGAAACCACCCAT
GGAAGCCATGGGACCGGGAGAAGGATCTGACTGCTGGGCGCCAAAAGGTAGCTTTAGACC
CAGAGAACATGTCACAAGGATTAACTTCCCGTTTCGCATCTGGTTCTGTTCAGAGGAACT
TCCTGTAAGCAGTATGGAAAGATACTCCTGGAGCATAGCCTAATCGATGATTAATATATC
CAGTTACATCCTTTCCGGCAGATGGCAAAGATATTACTGACACGTAAAAACGAGTTATGT
TATCAAGGATAATCATCTTGTAAGTTGGTGCCTGTTATGTTTATTTTCTCAGTGTATTAT
CTGGTAAGCTAAAATGATGTCATAGTTTGTTCGAACTATACAATAACTTTTTCAATAGTT
CTTAGAATCGTAATTTCATTTTGATGATGCTAAAATGACTAGGTTATGGGGTTGGGTTAC
CATGGGCCTTTTTGTTTCTTTTTTTTATTATTGTGCGAAAAATGGGCATGGCTTTTCGGA
TGGTTTCTGATAGTTCATGGTCCCCTTGGATACAATACATACCCTGCTACTTCATACGTG
CAGACTGCT