Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12592
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:52348486:52350767:-1 gene:SORBI_3006G166000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTGCTCCACCTCGTCACCTCCTCCTCCCCCCTAACCCCGGCACGCCCCTCGCCGCAG
CGGCGTACGTGTGTCTCTGCGGCGGCGGTTGCAGTGACTGTGAGGTGCGCGGCCTCCTCC
TCCTCGAGCACCCCGTCGTCGTCTTCATCGGAGGCTGCTGCTGCTGCCGGGCAGCGGGTG
GCGAAGGTGCACAGCTATGGGGCGGTGGATTACGAGCGTCGACCTCCACTGCGTTGGAGC
ACCCTGTACCGGCGCATAGCTGTGGGGCACGGTGGGCGGCCCGTGGGGCGCACGCTGGGG
GCCTGGGACGAGGGGGAGCGCCGCCTCGACAAATGGGAGCTCTGCCGCATCGCCAAGGAG
CTCCGAAAGTTTAGGAGGTTCAACCTCGCGCTCCAGGTTTACGATTGGATGACAGAGCGC
AGAGATAGATTTTCTCTCTCATCAAGTGACATGGCAATCCAGTTGGATCTGATTGCTAAA
GTACGCGGTGTTTCACATGCTGAGAAATACTTTGATGAGCTCCCTGATGCCATGAAGGAC
AAGCGGACATATGGTTCCCTTCTCAATGTTTACGCCCAAGCTATGATGAAAGAGAAAACA
GAAGACACATTTGAGCAAATGAGGAAAAAAGGATTTGCATCTGATACATTACCTTGTAAT
GTGTTGATGAATTTCTATGTGGATTCTGGGGAACCTAATGAAGTGTTGGCAATTATTGAT
GAGATGAAGGAAAGAAATGTTTCCTTTGATGTCTGCACTTACAACATTTGGATAAAGAGT
TGCGCGGCTAAACAAGATGCTGAAGAAATGGAGCGAGTCTTTAGCCAGATGATTGCTGAT
GAGTCTGTTGTTGCCAATTGGACTACTTATACCACTCTGGCTAGCATGTATATTAAGCTA
GGAAACTCTGAGAAGGCAGAAGAATGCTTGAAAGATGCTGAAAAGAGAACAACAGGCCGG
GAGAAAAAGTGTTTTCACTATCTCATGACACTATATAGCCATCTTGGCAAGAAGGAAGAA
GTTTACCGTATTTGGAACTGGTATAAGGCAACTTTCCCTATGATTCATAACCTGGGTTAC
CAGGAGTTACTGTCTGCTCTTGTAAGGATAGGAGATATCGAGGGAGCTGAGCTTCTATAT
GAGGAATGGGCATCCAAAAGCTCTAGTTTCGATCCTAAGACCATGAACATTTTATTAGCA
TGGTATGCTAAAGAAGGTTTGATTACAAAGGCTGAGCAAACTCTGAATCGATTTGTTGAG
AAAGGTGGAAATCCCAAGCCAAACACCTGGGAAATCCTTGCCACAGCCTACATGAAGGAT
GATAAAATATCTGAAGCTCTGTCATGTATGGAAAAAGCCACAGCAATTAAAAGTGCAAAT
AAATGGAAACCAAGACCCACCAATGTTGAGAGTCTCCTGGCAAGTTTTAAGGAGAAGAAT
GACGCAGAAGGTGCAGACAGGTTAGTGAGTGTACTTACAAGTAGAGGATGTGCTGAGGAT
GAAGAATACAAGTCACTGATTAACACCTATGCTTTTGCGGGCACATAG

Peptide Sequence

PEP ID

EES12592
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:52348486:52350767:-1 gene:SORBI_3006G166000 transcript:EES12592 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLLHLVTSSSPLTPARPSPQRRTCVSAAAVAVTVRCAASSSSSTPSSSSSEAAAAAGQRV
AKVHSYGAVDYERRPPLRWSTLYRRIAVGHGGRPVGRTLGAWDEGERRLDKWELCRIAKE
LRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFDELPDAMKD
KRTYGSLLNVYAQAMMKEKTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIID
EMKERNVSFDVCTYNIWIKSCAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKL
GNSEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGY
QELLSALVRIGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVE
KGGNPKPNTWEILATAYMKDDKISEALSCMEKATAIKSANKWKPRPTNVESLLASFKEKN
DAEGADRLVSVLTSRGCAEDEEYKSLINTYAFAGT

Transcript Sequence

Transcript ID

EES12592
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:52348486:52350767:-1 gene:SORBI_3006G166000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTGCTCCACCTCGTCACCTCCTCCTCCCCCCTAACCCCGGCACGCCCCTCGCCGCAG
CGGCGTACGTGTGTCTCTGCGGCGGCGGTTGCAGTGACTGTGAGGTGCGCGGCCTCCTCC
TCCTCGAGCACCCCGTCGTCGTCTTCATCGGAGGCTGCTGCTGCTGCCGGGCAGCGGGTG
GCGAAGGTGCACAGCTATGGGGCGGTGGATTACGAGCGTCGACCTCCACTGCGTTGGAGC
ACCCTGTACCGGCGCATAGCTGTGGGGCACGGTGGGCGGCCCGTGGGGCGCACGCTGGGG
GCCTGGGACGAGGGGGAGCGCCGCCTCGACAAATGGGAGCTCTGCCGCATCGCCAAGGAG
CTCCGAAAGTTTAGGAGGTTCAACCTCGCGCTCCAGGTTTACGATTGGATGACAGAGCGC
AGAGATAGATTTTCTCTCTCATCAAGTGACATGGCAATCCAGTTGGATCTGATTGCTAAA
GTACGCGGTGTTTCACATGCTGAGAAATACTTTGATGAGCTCCCTGATGCCATGAAGGAC
AAGCGGACATATGGTTCCCTTCTCAATGTTTACGCCCAAGCTATGATGAAAGAGAAAACA
GAAGACACATTTGAGCAAATGAGGAAAAAAGGATTTGCATCTGATACATTACCTTGTAAT
GTGTTGATGAATTTCTATGTGGATTCTGGGGAACCTAATGAAGTGTTGGCAATTATTGAT
GAGATGAAGGAAAGAAATGTTTCCTTTGATGTCTGCACTTACAACATTTGGATAAAGAGT
TGCGCGGCTAAACAAGATGCTGAAGAAATGGAGCGAGTCTTTAGCCAGATGATTGCTGAT
GAGTCTGTTGTTGCCAATTGGACTACTTATACCACTCTGGCTAGCATGTATATTAAGCTA
GGAAACTCTGAGAAGGCAGAAGAATGCTTGAAAGATGCTGAAAAGAGAACAACAGGCCGG
GAGAAAAAGTGTTTTCACTATCTCATGACACTATATAGCCATCTTGGCAAGAAGGAAGAA
GTTTACCGTATTTGGAACTGGTATAAGGCAACTTTCCCTATGATTCATAACCTGGGTTAC
CAGGAGTTACTGTCTGCTCTTGTAAGGATAGGAGATATCGAGGGAGCTGAGCTTCTATAT
GAGGAATGGGCATCCAAAAGCTCTAGTTTCGATCCTAAGACCATGAACATTTTATTAGCA
TGGTATGCTAAAGAAGGTTTGATTACAAAGGCTGAGCAAACTCTGAATCGATTTGTTGAG
AAAGGTGGAAATCCCAAGCCAAACACCTGGGAAATCCTTGCCACAGCCTACATGAAGGAT
GATAAAATATCTGAAGCTCTGTCATGTATGGAAAAAGCCACAGCAATTAAAAGTGCAAAT
AAATGGAAACCAAGACCCACCAATGTTGAGAGTCTCCTGGCAAGTTTTAAGGAGAAGAAT
GACGCAGAAGGTGCAGACAGGTTAGTGAGTGTACTTACAAGTAGAGGATGTGCTGAGGAT
GAAGAATACAAGTCACTGATTAACACCTATGCTTTTGCGGGCACATAGCATGGAAAGCGT
AATCGTATCATTGAATCATTGATATGATGAGTATGACACATTGAACAATCACATTACTTC
ACACCATGAGAACCTAATGCCCACATGAGTTCATCTGGTACAGTTACATCCATCAGACGA
TCAGTTGCCCCCATAGACGAAATCAGAAAAATGAGGTACATAGATCTTTCCGATCACTTG
GCTTAGATAGAAATCCTCAAAATGTTTCTTAAAAAAAATCCTCAAAATGTCAACAAGAGG
ACACTTTGATGGCTTCTTTGTACTTCTGAGTGTATATTTACATTATTTTTGAGGATTAAT
CAAGCCTTCTCAGTGCAAG