Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12588
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:52323626:52326718:-1 gene:SORBI_3006G165800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGATGGGGGCGGCGGCGGCGAAACCGGCACCGAGGGCGGACGGCGTGCGGAGGTAC
AAGGTACTCGTGCCCTGGCGGTTCCAGCCCGGCTACGTCAGGCAGCCGCTCAAGCACACC
GCCTCCGCCAATGGGGCAGCGCCCAACGGCGGTGGCGGTAATACCGCCGGCGTCCCTGAT
GCTAAAAATTGTGGATCGGATGGGGCGCCGAGCGCCGTCGGTGAAACCAACGGTTTCCGA
GACTCCAAAATTTTCGGATCGGGTGGGGCGCCGAGCCCCGGCAAGAGCGGGGCAGTTGGT
GCAGGAGAGGAGCAATCGGTGAGATGCACTCGAGGTCAGAGTTTGAAGAGCCCTGACGTG
GACAATGGTGGTTGCCCTGGACCTGGAAATGCATGCAATCTGGGCAAGCCTGTAAGGGGT
GGCCGGGTGAAGAGCTCCCCATTGGAAGGTACTGGAAATAGCAGGGGTGCCAATGATGGC
GTCGTGGCTGCCGCTGGAGAGGACTGCAATCTGGGGAGCTCTAACTGTGATGATAGTTTC
AAGGATGCTCGCACCCAGGATTTTAGTGGTGCTGGCGATGGAACAGCTTGCGACCCTGAG
GTGATTGAGATCACAGAGAAGTGCTTTGCGAAGGGTTTGAAGAAGCCGTCTGTGGATCAG
ACTGGGTCAAAGAGCAATGGTTCTGCTTCAGGACTCAGGTCAGAGGACCCTGAGGGAAAT
GTTGGCTTGGGAGATTCCTCTTATCACGCTGCAAAAGGGTGTAGCATGGGAGATGGGGCA
GCGAAGGAGAATAACGCAACAGCCAAAGGTTGCAGCTCGGCGACTCCTGGCAGCAATGGT
AATGGAACGTACGTCCGCAAGGGACGGAAGACAGTTGTACCATGGAGATTCCAGGCTGGG
TACAAGCGATCATTCTCTGATGCTTTTGGGTCCAATAATCTATCTCCTGATCGTCCAGCA
TACGGGTTTGACGGCAGTTCAACACAGTGTGCTCCAGCAACTAGAAGCTCTGTGCGGTGT
TATGCAAGTGCTCATTCTGGTGTTAGAGTTTCTGCTATGTCTAACTTCTCAATGAAAGGT
GAAAATGGGACTGGTACTGAATGTAAGAAGAGGAAAACTAATAGCGATTATCAGGATGAA
GTGATGCTAGATAATGGAGATCCAATCGTTAGAGAAAGCATCATGCGGTCTCTACAGGAT
CTCCGGTTAATTTATCGGGAGCTTTTAGATGAAGAAGAAGATAATTCGAGGGAAGAAGTG
CTTAACATGCGGCCAGATCTACGGGCTTACAAAATTTTCAGGGAGCGGTTCTCCACAGAG
TTTGATGATGAGAAATATATTGGCAGTGTGCCTGGAATCTATCCTGGTGATATCTTTCAT
CTGAGGGTTGAGCTTTGTGTTGTTGGTCTCCATCGCCCACACAGGGTAGGTATTGATTGT
ACCAAGAAGGATGATGGTACTACTGTGGCTGTTAGTATTGTGTCATGTGCACAATCTTCT
GACATCAAGTATAATCTGGATGTCTTGGTATATACTGGACCAGTGGCAGTTACAGTCAAT
CAGAGGATAGAGGGTACCAACTGGGCTCTTAAAAAGAGCATGGACACTAATACACCAGTC
CGTGTTATCCATGGGTTCACCACTCAAAATGGAAAAAAAAAGTTTCCTACTTATATATAT
GGTGGTTTATACCTTGTTGAGAAGTACTGGAGGGAGAAAGAGCATGGAGACCGTTATGTG
TATATGTTCCGACTGAGAAGAATGAAAGGGCAAAAACACATTGACATCCAAGAAATTCTG
CAAACAGGGAACTCTGGATCAAAGAACAATGTTATCATCAAAGATCTATCACATGGATTG
GAGAGAGTTCCTGTACCTGTTGTTAACAAAATATCCGATGAGTGCCCAATGCCCTATCGC
TACACTTCACACCTTCAATATCCCCGTAACTATCGTCCAACTCCTCCAGCAGGTTGTGGT
TGTGTAGGTGGGTGCTCAGACACAAAAAGGTGTGCATGTGCAGTGAAAAATGGTGGAGAA
ATCCCTTTCAATGATAAAGGCCGCATTTTAGAAGCAAAGCCTCTTGTTTATGAGTGTGGG
CCTTCTTGCAAGTGCCCTCCTACATGTCACAACAGAGTTGGCCAGCATGGGCTCAAGTTT
CGGCTGCAAATCTTCAAAACAAAATCAATGGGTTGGGGTGTGAGAACTCTTGACTTCATA
CCGTCTGGAAGCTTTGTGTGTGAATATATAGGAGAAGTGTTGGAGGATGAAGAAGCACAA
AAAAGGACAAATGATGAGTACTTATTTGCTATCGGGCACAATTATTATGATGAGTCACTT
TGGGAGGGCCTATCAAGATCTATACCGTCACTTCAGAAGGGTCCGGGCAAAGATGATGAA
ACTGGATTTGCTGTTGATGCTTCAGAGATGGGGAACTTTGCAAAATTTATCAATCATAGT
TGCACCCCAAACATATATGCACAAAATGTCCTTTATGATCATGAAGATATCAGTGTGCCT
CATATCATGTTCTTTGCTTGCGACGATATTCGACCCAATCAAGAACTATTCTACCACTAC
AATTACAAAATAGATCAGGTTCATGATGCCAATGGGAACATCAAGAAGAAGAAATGCCTT
TGTGGCTCGGTTGAGTGTGATGGCTGGCTGTATTAA

Peptide Sequence

PEP ID

EES12588
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:52323626:52326718:-1 gene:SORBI_3006G165800 transcript:EES12588 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEMGAAAAKPAPRADGVRRYKVLVPWRFQPGYVRQPLKHTASANGAAPNGGGGNTAGVPD
AKNCGSDGAPSAVGETNGFRDSKIFGSGGAPSPGKSGAVGAGEEQSVRCTRGQSLKSPDV
DNGGCPGPGNACNLGKPVRGGRVKSSPLEGTGNSRGANDGVVAAAGEDCNLGSSNCDDSF
KDARTQDFSGAGDGTACDPEVIEITEKCFAKGLKKPSVDQTGSKSNGSASGLRSEDPEGN
VGLGDSSYHAAKGCSMGDGAAKENNATAKGCSSATPGSNGNGTYVRKGRKTVVPWRFQAG
YKRSFSDAFGSNNLSPDRPAYGFDGSSTQCAPATRSSVRCYASAHSGVRVSAMSNFSMKG
ENGTGTECKKRKTNSDYQDEVMLDNGDPIVRESIMRSLQDLRLIYRELLDEEEDNSREEV
LNMRPDLRAYKIFRERFSTEFDDEKYIGSVPGIYPGDIFHLRVELCVVGLHRPHRVGIDC
TKKDDGTTVAVSIVSCAQSSDIKYNLDVLVYTGPVAVTVNQRIEGTNWALKKSMDTNTPV
RVIHGFTTQNGKKKFPTYIYGGLYLVEKYWREKEHGDRYVYMFRLRRMKGQKHIDIQEIL
QTGNSGSKNNVIIKDLSHGLERVPVPVVNKISDECPMPYRYTSHLQYPRNYRPTPPAGCG
CVGGCSDTKRCACAVKNGGEIPFNDKGRILEAKPLVYECGPSCKCPPTCHNRVGQHGLKF
RLQIFKTKSMGWGVRTLDFIPSGSFVCEYIGEVLEDEEAQKRTNDEYLFAIGHNYYDESL
WEGLSRSIPSLQKGPGKDDETGFAVDASEMGNFAKFINHSCTPNIYAQNVLYDHEDISVP
HIMFFACDDIRPNQELFYHYNYKIDQVHDANGNIKKKKCLCGSVECDGWLY

Transcript Sequence

Transcript ID

EES12588
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:52323626:52326718:-1 gene:SORBI_3006G165800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGCCCTCTTCCACAGCTGCCGCCCGGGCTCGGCCAACCCGTGGCACCGCTCGTCTCGAG
GCAGGGCGACCCTTGCATCGCTCGAGTGGGGGACGCTGGGGAGGCACCCAGCCCTCTCCG
CCATTTCCGGAAGGAAATCGTCCACTGCGCCGTCGCTCTCTACTCCCCGCCCTCATCCCG
GAACCGCTCCGCCGCGCCGTGGGCCGCTTCCATCTCCAGGTACGCATCGGGGAGAACTCC
AGTCTACCGTCTCGCCCGCTTGGTCGGCCCCGAGTATTCGATTTGAGCACCTGAGAACTG
AGGTTATCGTGTGTTTCCCCTTGTTTTTTATTAATCCGCGTCCAGGGGGCAGGGGATCTC
GGAGGGGGTCAACCGGTGAGTCCGAGCGGGGCAGCGGCGGCGTTGGATGGAGATGGGGGC
GGCGGCGGCGAAACCGGCACCGAGGGCGGACGGCGTGCGGAGGTACAAGGTACTCGTGCC
CTGGCGGTTCCAGCCCGGCTACGTCAGGCAGCCGCTCAAGCACACCGCCTCCGCCAATGG
GGCAGCGCCCAACGGCGGTGGCGGTAATACCGCCGGCGTCCCTGATGCTAAAAATTGTGG
ATCGGATGGGGCGCCGAGCGCCGTCGGTGAAACCAACGGTTTCCGAGACTCCAAAATTTT
CGGATCGGGTGGGGCGCCGAGCCCCGGCAAGAGCGGGGCAGTTGGTGCAGGAGAGGAGCA
ATCGGTGAGATGCACTCGAGGTCAGAGTTTGAAGAGCCCTGACGTGGACAATGGTGGTTG
CCCTGGACCTGGAAATGCATGCAATCTGGGCAAGCCTGTAAGGGGTGGCCGGGTGAAGAG
CTCCCCATTGGAAGGTACTGGAAATAGCAGGGGTGCCAATGATGGCGTCGTGGCTGCCGC
TGGAGAGGACTGCAATCTGGGGAGCTCTAACTGTGATGATAGTTTCAAGGATGCTCGCAC
CCAGGATTTTAGTGGTGCTGGCGATGGAACAGCTTGCGACCCTGAGGTGATTGAGATCAC
AGAGAAGTGCTTTGCGAAGGGTTTGAAGAAGCCGTCTGTGGATCAGACTGGGTCAAAGAG
CAATGGTTCTGCTTCAGGACTCAGGTCAGAGGACCCTGAGGGAAATGTTGGCTTGGGAGA
TTCCTCTTATCACGCTGCAAAAGGGTGTAGCATGGGAGATGGGGCAGCGAAGGAGAATAA
CGCAACAGCCAAAGGTTGCAGCTCGGCGACTCCTGGCAGCAATGGTAATGGAACGTACGT
CCGCAAGGGACGGAAGACAGTTGTACCATGGAGATTCCAGGCTGGGTACAAGCGATCATT
CTCTGATGCTTTTGGGTCCAATAATCTATCTCCTGATCGTCCAGCATACGGGTTTGACGG
CAGTTCAACACAGTGTGCTCCAGCAACTAGAAGCTCTGTGCGGTGTTATGCAAGTGCTCA
TTCTGGTGTTAGAGTTTCTGCTATGTCTAACTTCTCAATGAAAGGTGAAAATGGGACTGG
TACTGAATGTAAGAAGAGGAAAACTAATAGCGATTATCAGGATGAAGTGATGCTAGATAA
TGGAGATCCAATCGTTAGAGAAAGCATCATGCGGTCTCTACAGGATCTCCGGTTAATTTA
TCGGGAGCTTTTAGATGAAGAAGAAGATAATTCGAGGGAAGAAGTGCTTAACATGCGGCC
AGATCTACGGGCTTACAAAATTTTCAGGGAGCGGTTCTCCACAGAGTTTGATGATGAGAA
ATATATTGGCAGTGTGCCTGGAATCTATCCTGGTGATATCTTTCATCTGAGGGTTGAGCT
TTGTGTTGTTGGTCTCCATCGCCCACACAGGGTAGGTATTGATTGTACCAAGAAGGATGA
TGGTACTACTGTGGCTGTTAGTATTGTGTCATGTGCACAATCTTCTGACATCAAGTATAA
TCTGGATGTCTTGGTATATACTGGACCAGTGGCAGTTACAGTCAATCAGAGGATAGAGGG
TACCAACTGGGCTCTTAAAAAGAGCATGGACACTAATACACCAGTCCGTGTTATCCATGG
GTTCACCACTCAAAATGGAAAAAAAAAGTTTCCTACTTATATATATGGTGGTTTATACCT
TGTTGAGAAGTACTGGAGGGAGAAAGAGCATGGAGACCGTTATGTGTATATGTTCCGACT
GAGAAGAATGAAAGGGCAAAAACACATTGACATCCAAGAAATTCTGCAAACAGGGAACTC
TGGATCAAAGAACAATGTTATCATCAAAGATCTATCACATGGATTGGAGAGAGTTCCTGT
ACCTGTTGTTAACAAAATATCCGATGAGTGCCCAATGCCCTATCGCTACACTTCACACCT
TCAATATCCCCGTAACTATCGTCCAACTCCTCCAGCAGGTTGTGGTTGTGTAGGTGGGTG
CTCAGACACAAAAAGGTGTGCATGTGCAGTGAAAAATGGTGGAGAAATCCCTTTCAATGA
TAAAGGCCGCATTTTAGAAGCAAAGCCTCTTGTTTATGAGTGTGGGCCTTCTTGCAAGTG
CCCTCCTACATGTCACAACAGAGTTGGCCAGCATGGGCTCAAGTTTCGGCTGCAAATCTT
CAAAACAAAATCAATGGGTTGGGGTGTGAGAACTCTTGACTTCATACCGTCTGGAAGCTT
TGTGTGTGAATATATAGGAGAAGTGTTGGAGGATGAAGAAGCACAAAAAAGGACAAATGA
TGAGTACTTATTTGCTATCGGGCACAATTATTATGATGAGTCACTTTGGGAGGGCCTATC
AAGATCTATACCGTCACTTCAGAAGGGTCCGGGCAAAGATGATGAAACTGGATTTGCTGT
TGATGCTTCAGAGATGGGGAACTTTGCAAAATTTATCAATCATAGTTGCACCCCAAACAT
ATATGCACAAAATGTCCTTTATGATCATGAAGATATCAGTGTGCCTCATATCATGTTCTT
TGCTTGCGACGATATTCGACCCAATCAAGAACTATTCTACCACTACAATTACAAAATAGA
TCAGGTTCATGATGCCAATGGGAACATCAAGAAGAAGAAATGCCTTTGTGGCTCGGTTGA
GTGTGATGGCTGGCTGTATTAAATTTTTTGAAG