Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12565
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:51920807:51926017:-1 gene:SORBI_3006G161300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGCTGCGGCGTGGCTGTGTGGACTCCTGTGGCTCCTGGCCCACGCCGCCGCTGTG
GCGTCGGCGGCGGATGGGGCGGATGGTGGGTGGGAGCCGCTGATACGGATGCCGACGGGG
AAGGGGGGTGACGCTGCTGCTCGGGCGGTTGAGGAGGATGATGAAGTGGGGACGAGGTGG
GCCGTGCTCGTCGCCGGCTCCTCCGGATACGGGAACTACCGGCACCAGGCCGATGTGTGC
CATGCGTACCAGATACTGCGGAAGGGAGGAGTGAAGGAGGAGAACATTGTGGTGTTCATG
TATGATGACATTGCCCATAACATTCTGAACCCGAGGCCTGGGGTTATCATTAACCATCCA
AAAGGCGAAAATGTTTATAATGGTGTTCCAAAGGATTACACAGGTGATCAGGTCACTACC
GAAAACTTCTTTGCTGTCCTCTTGGGCAATAAAAGTGCTATCACAGGAGGGAGTAAGAAG
GTGATAGACAGCAAACCTAATGACCACATCTTCATCTATTACTCAGATCATGGGGGTCCT
GGAGTTCTTGGTATGCCGAACTTGCCATATCTGTATGCTGGCGACTTCATCAAGGTTTTG
AAAAAGAAGCATGCTTGCAATAGCTACTCAAAAATGGTTATATATGTTGAAGCATGTGAG
AGTGGCAGTATCTTCGAGGGATTAATGCCTGAAGATCTGAATATTTATGTCACAACAGCC
TCAAATCCAGTTGAAAATAGTTGGGGAACATACTGCCCTGGGATGGAACCATCACCCCCT
CCTGAGTACATTACCTGTTTAGGTGATTTGTACAGTGTTTCTTGGATGGAAGATAGTCAA
ACCCACAATCTAAAGAAGGAAACCATCAAGGATCAGTATGAAGTGGTGAAAACAAGAACC
TCAAACTCGAATAAGTACAAAGAGGGTTCTCATGTTATGGAGTATGGTGATAAGACCTTC
AAGGATGAGAAGCTTTTCCTTTATCAAGGTTTTGATCCTGCTAATGCCAACATCGCAAAC
ATGCTGCTTTGGCCAGGCCCAAAGGGTGCAGTCAATCAAAGAGATGCTGATCTTCTCTTC
ATGTGGAAGAGGTATGAGCAGTTAAATGGGGAGTCTGTAGAGAAGCTGAGGGCTCTCATA
GAGATTAAAGAAACTGTTCAACATAGGAAGCATCTTGACAGCAGTATCGATTTCATTGGG
AGGCTTCTCTTCGGATTTGAGAAAGGGCCTTCAATGCTTGAGGCTGTTAGAGCCTCGGGT
CTACCATTAGTCGATGATTGGGATTGCTTGAAGAGGATGGTGCGCATTTTCGAATCCCAG
TGTGGTTCACTCACTCAGTATGGCATGAAGTACATGCGAGCATTTGCAAACATTTGCAAC
AGCGGTATATCTGAGATGAAAATGAGGGAGTCCAGCATCAGCGCTTGCAGCAGCTACAAC
TCCGCGAGGTGGAGCCCGATGGCTCAGGGACACAGCGCTTGA

Peptide Sequence

PEP ID

EES12565
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:51920807:51926017:-1 gene:SORBI_3006G161300 transcript:EES12565 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAWLCGLLWLLAHAAAVASAADGADGGWEPLIRMPTGKGGDAAARAVEEDDEVGTRW
AVLVAGSSGYGNYRHQADVCHAYQILRKGGVKEENIVVFMYDDIAHNILNPRPGVIINHP
KGENVYNGVPKDYTGDQVTTENFFAVLLGNKSAITGGSKKVIDSKPNDHIFIYYSDHGGP
GVLGMPNLPYLYAGDFIKVLKKKHACNSYSKMVIYVEACESGSIFEGLMPEDLNIYVTTA
SNPVENSWGTYCPGMEPSPPPEYITCLGDLYSVSWMEDSQTHNLKKETIKDQYEVVKTRT
SNSNKYKEGSHVMEYGDKTFKDEKLFLYQGFDPANANIANMLLWPGPKGAVNQRDADLLF
MWKRYEQLNGESVEKLRALIEIKETVQHRKHLDSSIDFIGRLLFGFEKGPSMLEAVRASG
LPLVDDWDCLKRMVRIFESQCGSLTQYGMKYMRAFANICNSGISEMKMRESSISACSSYN
SARWSPMAQGHSA

Transcript Sequence

Transcript ID

EES12565
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:51920807:51926017:-1 gene:SORBI_3006G161300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCCGGTGCTCACTCACGCGACGGAGTCGTGTTTCCAGCGTCCAGCCTTCCGGGCGCCTC
TGCTGCCTGCAACGGTGCAGCCTGCGCGCGTTGTGATTGTGAAGCCGTGAACGGCAGCTC
GGGCTCGGCGCAGCCGCGCAGGGCCCCTGCCGCGCCGGCATCGCGCCGCGGCCGCGGTGC
GGGGCATGCTGCCTGCGTTGCTGGCTTGCTGCGGCACGCCACGTCACATCGGGTTGTTTT
TAAGAGGCGCCCTCCGGACCTAGACTCGCCGTCACCGCTCACCACACTCTCGCACCTACT
ACCCGCCTGCTCTCTCTCTGTCTGACGCGCCGCCCTCGCGATCGGTGATGGCAGCTGCGG
CGTGGCTGTGTGGACTCCTGTGGCTCCTGGCCCACGCCGCCGCTGTGGCGTCGGCGGCGG
ATGGGGCGGATGGTGGGTGGGAGCCGCTGATACGGATGCCGACGGGGAAGGGGGGTGACG
CTGCTGCTCGGGCGGTTGAGGAGGATGATGAAGTGGGGACGAGGTGGGCCGTGCTCGTCG
CCGGCTCCTCCGGATACGGGAACTACCGGCACCAGGCCGATGTGTGCCATGCGTACCAGA
TACTGCGGAAGGGAGGAGTGAAGGAGGAGAACATTGTGGTGTTCATGTATGATGACATTG
CCCATAACATTCTGAACCCGAGGCCTGGGGTTATCATTAACCATCCAAAAGGCGAAAATG
TTTATAATGGTGTTCCAAAGGATTACACAGGTGATCAGGTCACTACCGAAAACTTCTTTG
CTGTCCTCTTGGGCAATAAAAGTGCTATCACAGGAGGGAGTAAGAAGGTGATAGACAGCA
AACCTAATGACCACATCTTCATCTATTACTCAGATCATGGGGGTCCTGGAGTTCTTGGTA
TGCCGAACTTGCCATATCTGTATGCTGGCGACTTCATCAAGGTTTTGAAAAAGAAGCATG
CTTGCAATAGCTACTCAAAAATGGTTATATATGTTGAAGCATGTGAGAGTGGCAGTATCT
TCGAGGGATTAATGCCTGAAGATCTGAATATTTATGTCACAACAGCCTCAAATCCAGTTG
AAAATAGTTGGGGAACATACTGCCCTGGGATGGAACCATCACCCCCTCCTGAGTACATTA
CCTGTTTAGGTGATTTGTACAGTGTTTCTTGGATGGAAGATAGTCAAACCCACAATCTAA
AGAAGGAAACCATCAAGGATCAGTATGAAGTGGTGAAAACAAGAACCTCAAACTCGAATA
AGTACAAAGAGGGTTCTCATGTTATGGAGTATGGTGATAAGACCTTCAAGGATGAGAAGC
TTTTCCTTTATCAAGGTTTTGATCCTGCTAATGCCAACATCGCAAACATGCTGCTTTGGC
CAGGCCCAAAGGGTGCAGTCAATCAAAGAGATGCTGATCTTCTCTTCATGTGGAAGAGGT
ATGAGCAGTTAAATGGGGAGTCTGTAGAGAAGCTGAGGGCTCTCATAGAGATTAAAGAAA
CTGTTCAACATAGGAAGCATCTTGACAGCAGTATCGATTTCATTGGGAGGCTTCTCTTCG
GATTTGAGAAAGGGCCTTCAATGCTTGAGGCTGTTAGAGCCTCGGGTCTACCATTAGTCG
ATGATTGGGATTGCTTGAAGAGGATGGTGCGCATTTTCGAATCCCAGTGTGGTTCACTCA
CTCAGTATGGCATGAAGTACATGCGAGCATTTGCAAACATTTGCAACAGCGGTATATCTG
AGATGAAAATGAGGGAGTCCAGCATCAGCGCTTGCAGCAGCTACAACTCCGCGAGGTGGA
GCCCGATGGCTCAGGGACACAGCGCTTGATGCTAAGATCAATAGCAGAACCCCCGAGGTC
TGCTGCCCCCTCCCCCTGTGTGCGAGCTCGTATCATCTGGGGACCGTGTGCACCCATGAT
TACTTGTATATATCATCATGTACTTATGTTCGTAGTACCTATGTAAAGTAATGCCAAGTC
TGATCTTCATCCAACTACCGAAATGATTAAGATCAGATGTGAATGGTGTTGCGATGGATG
ATCGCAAGGTAGGCCATTTATCAGTGGACCAAAAATGATGACCCAAATCAAGGTAGTGCT
CCTCTGATAGCCCATATCTATTGCTA