Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12553
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:51647415:51651152:-1 gene:SORBI_3006G157700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCTCTCGCCCTCCTCCTCTGCCTCCTCGCCTGCGGCGCAGCAGGCGCCGCCGCCACC
GCGCGCCCGTGCGCGTCGCCTTATTCCGGCAGCAGCGCCTACCCGTTCTGCGACGCGTCG
CTCTCCATCCCGGCCCGCGCGCGCGCGCTCGTCTCGCTGCTCACCCTGGACGAGAAGATC
GCGCAGCTGTCCAACACGGCGGGCGGGGTCCCGCGCCTGGGCATCCCGCCCTACCAGTGG
TGGTCCGAGTCGCTCCACGGCCTCGCCGACAACGGGCCCGGGGTCAACTTCTCCTCGGGC
CCCGTCCGCGCCGCCACCACGTTCCCGCAGGTCATCCTGTCCACCGCCGCCTTCAACCGC
TCGCTGTGGCGCGCCGTCGCCGAGGCCGTTGCGACGGAGGCGCTCGGCATGCACAACGCC
GGCCAGGCCGGCCTCACGTACTGGGCGCCCAACATCAACATCTTCCGAGACCCGAGGTGG
GGCCGTGGCCAGGAGACGTCCGGGGAGGACCCCGCTGTCGCCGCCGCGTACTCCCTCGAG
TATGTCAAGGGCTTCCAGGGGGAGCAAGGGGAGGAAGGCAGAATCAGGCTCTCTGCGTGC
TGCAAGCACTATACAGCGTATGACATGGAGAAATGGGAAGGATTCTCGAGGTACACCTTC
AATGCCAAGGTAAATGCACAAGATTTGGAAGACACGTACCAGCCGCCTTTCAAGACCTGC
ATCCAGGAGGCTCGTGCTAGCTGCTTGATGTGTGCATATAACCAGGTCAATGGCGTGCCT
ATGTGTGCTAACAAAGATCTTCTACAGAAGACCAGGGATGAATGGGGCTTCCAGGGGTAT
ATTACATCTGATTGTGATGCTGTGGCAATTATTCATGAAAACCAGACATACACTAAATCA
GATGAAGATTCGATAGCAATTGTTCTTAAGGCAGGAATGGATATCAACTGTGGTTCTTTC
CTAGTTCGGCATACTAAGTCAGCAGTTGAGAAGGGAAAGGTTCAAGAACAAGATATCGAC
CGTGCCCTTTTTAATCTATTCTCTGTTCAATTGCGTCTTGGAATATTTGATAAGCCCAAC
AACAACCAATGGTCCACTCAACTAGGGCCCAACAATGTGTGCACGAAAGAGCATAGAGAG
CTTGCAGCAGAAGCTGTAAGGCAGGGTGCTGTCCTTCTGAAGAATGACCATAGTTTTTTG
CCTCTGAAGAGAAGCGAAGTTAGACATGTTGCCATCATTGGACCATCTGCAAATGATGTG
TATGCGATGGGTGGAGACTATACAGGTGTAGCCTGCAACCCGACGACCTTCCTTAAGGGC
ATTCAAGCCTATGCTACACAAACAACCTTTGCCGCTGGATGCAAGGATGTTTCCTGTAAC
TCAACAGAATTGTTTGGCGAAGCTATTGCTGCAGCTAAAAGAGCCGATATTGTTGTTGTA
GTTGCTGGCTTGAACCTGACAGAAGAGCGTGAAGACTTCGATAGAGTGAGCCTTCTCCTT
CCAGGCAAGCAGATGAGCCTCATACATGCCGTTGCTAGTGTAGCGAAGAAGCCCCTTGTG
TTGGTTCTCTTAGGTGGTGGTCCTGTTGATGTTTCATTTGCTAAGCAAGATCCACGAATT
GCAAGCATTCTTTGGCTCGGATATCCTGGTGAGGTTGGTGGACAGGTCCTTCCGGAAATT
CTTTTTGGAGAGTACAACCCAGGAGGAAAGCTGGCTATGACTTGGTATCCCGAATCCTTT
ACTGCTATTCCGATGACTGATATGAACATGAGAGCTGACCCTTCACGAGGCTACCCTGGG
AGAACATATCGATTTTACACTGGCGATGTAGTGTATGGTTTTGGATACGGTTTAAGTTAC
TCCAAATATTCGTATAGCATCTTGTCGGCTCCAAAGAAGATCACCATGTCGCGTTCATCA
GTTTTGGACATTATTAGTAGAAAGCCTTCATACATAAGGAGGGATGGACTAGACTTCGTG
AAAACTGAAGATATTGCATCATGTGAAGCTCTGGCATTCTCTGTTCATGTCGCTGTTTCA
AATCATGGTAGCATGGATGGGAGTCATGCTGTTCTTCTGTTTGCGAGATCGAAATCAAGC
GTTCCGGGCTTTCCTATCAAACAGCTGGTTGGGTTCGAGCGTGTCCACACGGCGGCTGGC
AGTGCATCCAATGTGGAGATTAGCGTCGACCCTTGCAAGCATATGAGCGCAGCCAATCCT
GAAGGCAAAAGGGTACTGTTATTGGGTGACCATGTTCTGACGGTGGGTGATGAAGAGTTC
GAATTATTCATTGAACTCTGA

Peptide Sequence

PEP ID

EES12553
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:51647415:51651152:-1 gene:SORBI_3006G157700 transcript:EES12553 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPLALLLCLLACGAAGAAATARPCASPYSGSSAYPFCDASLSIPARARALVSLLTLDEKI
AQLSNTAGGVPRLGIPPYQWWSESLHGLADNGPGVNFSSGPVRAATTFPQVILSTAAFNR
SLWRAVAEAVATEALGMHNAGQAGLTYWAPNINIFRDPRWGRGQETSGEDPAVAAAYSLE
YVKGFQGEQGEEGRIRLSACCKHYTAYDMEKWEGFSRYTFNAKVNAQDLEDTYQPPFKTC
IQEARASCLMCAYNQVNGVPMCANKDLLQKTRDEWGFQGYITSDCDAVAIIHENQTYTKS
DEDSIAIVLKAGMDINCGSFLVRHTKSAVEKGKVQEQDIDRALFNLFSVQLRLGIFDKPN
NNQWSTQLGPNNVCTKEHRELAAEAVRQGAVLLKNDHSFLPLKRSEVRHVAIIGPSANDV
YAMGGDYTGVACNPTTFLKGIQAYATQTTFAAGCKDVSCNSTELFGEAIAAAKRADIVVV
VAGLNLTEEREDFDRVSLLLPGKQMSLIHAVASVAKKPLVLVLLGGGPVDVSFAKQDPRI
ASILWLGYPGEVGGQVLPEILFGEYNPGGKLAMTWYPESFTAIPMTDMNMRADPSRGYPG
RTYRFYTGDVVYGFGYGLSYSKYSYSILSAPKKITMSRSSVLDIISRKPSYIRRDGLDFV
KTEDIASCEALAFSVHVAVSNHGSMDGSHAVLLFARSKSSVPGFPIKQLVGFERVHTAAG
SASNVEISVDPCKHMSAANPEGKRVLLLGDHVLTVGDEEFELFIEL

Transcript Sequence

Transcript ID

EES12553
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:51647415:51651152:-1 gene:SORBI_3006G157700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAATCCGGATCCTCCCCACCTAACGGCTACGGCCCGCCAATTCGCCATGCCTCTCGCCCT
CCTCCTCTGCCTCCTCGCCTGCGGCGCAGCAGGCGCCGCCGCCACCGCGCGCCCGTGCGC
GTCGCCTTATTCCGGCAGCAGCGCCTACCCGTTCTGCGACGCGTCGCTCTCCATCCCGGC
CCGCGCGCGCGCGCTCGTCTCGCTGCTCACCCTGGACGAGAAGATCGCGCAGCTGTCCAA
CACGGCGGGCGGGGTCCCGCGCCTGGGCATCCCGCCCTACCAGTGGTGGTCCGAGTCGCT
CCACGGCCTCGCCGACAACGGGCCCGGGGTCAACTTCTCCTCGGGCCCCGTCCGCGCCGC
CACCACGTTCCCGCAGGTCATCCTGTCCACCGCCGCCTTCAACCGCTCGCTGTGGCGCGC
CGTCGCCGAGGCCGTTGCGACGGAGGCGCTCGGCATGCACAACGCCGGCCAGGCCGGCCT
CACGTACTGGGCGCCCAACATCAACATCTTCCGAGACCCGAGGTGGGGCCGTGGCCAGGA
GACGTCCGGGGAGGACCCCGCTGTCGCCGCCGCGTACTCCCTCGAGTATGTCAAGGGCTT
CCAGGGGGAGCAAGGGGAGGAAGGCAGAATCAGGCTCTCTGCGTGCTGCAAGCACTATAC
AGCGTATGACATGGAGAAATGGGAAGGATTCTCGAGGTACACCTTCAATGCCAAGGTAAA
TGCACAAGATTTGGAAGACACGTACCAGCCGCCTTTCAAGACCTGCATCCAGGAGGCTCG
TGCTAGCTGCTTGATGTGTGCATATAACCAGGTCAATGGCGTGCCTATGTGTGCTAACAA
AGATCTTCTACAGAAGACCAGGGATGAATGGGGCTTCCAGGGGTATATTACATCTGATTG
TGATGCTGTGGCAATTATTCATGAAAACCAGACATACACTAAATCAGATGAAGATTCGAT
AGCAATTGTTCTTAAGGCAGGAATGGATATCAACTGTGGTTCTTTCCTAGTTCGGCATAC
TAAGTCAGCAGTTGAGAAGGGAAAGGTTCAAGAACAAGATATCGACCGTGCCCTTTTTAA
TCTATTCTCTGTTCAATTGCGTCTTGGAATATTTGATAAGCCCAACAACAACCAATGGTC
CACTCAACTAGGGCCCAACAATGTGTGCACGAAAGAGCATAGAGAGCTTGCAGCAGAAGC
TGTAAGGCAGGGTGCTGTCCTTCTGAAGAATGACCATAGTTTTTTGCCTCTGAAGAGAAG
CGAAGTTAGACATGTTGCCATCATTGGACCATCTGCAAATGATGTGTATGCGATGGGTGG
AGACTATACAGGTGTAGCCTGCAACCCGACGACCTTCCTTAAGGGCATTCAAGCCTATGC
TACACAAACAACCTTTGCCGCTGGATGCAAGGATGTTTCCTGTAACTCAACAGAATTGTT
TGGCGAAGCTATTGCTGCAGCTAAAAGAGCCGATATTGTTGTTGTAGTTGCTGGCTTGAA
CCTGACAGAAGAGCGTGAAGACTTCGATAGAGTGAGCCTTCTCCTTCCAGGCAAGCAGAT
GAGCCTCATACATGCCGTTGCTAGTGTAGCGAAGAAGCCCCTTGTGTTGGTTCTCTTAGG
TGGTGGTCCTGTTGATGTTTCATTTGCTAAGCAAGATCCACGAATTGCAAGCATTCTTTG
GCTCGGATATCCTGGTGAGGTTGGTGGACAGGTCCTTCCGGAAATTCTTTTTGGAGAGTA
CAACCCAGGAGGAAAGCTGGCTATGACTTGGTATCCCGAATCCTTTACTGCTATTCCGAT
GACTGATATGAACATGAGAGCTGACCCTTCACGAGGCTACCCTGGGAGAACATATCGATT
TTACACTGGCGATGTAGTGTATGGTTTTGGATACGGTTTAAGTTACTCCAAATATTCGTA
TAGCATCTTGTCGGCTCCAAAGAAGATCACCATGTCGCGTTCATCAGTTTTGGACATTAT
TAGTAGAAAGCCTTCATACATAAGGAGGGATGGACTAGACTTCGTGAAAACTGAAGATAT
TGCATCATGTGAAGCTCTGGCATTCTCTGTTCATGTCGCTGTTTCAAATCATGGTAGCAT
GGATGGGAGTCATGCTGTTCTTCTGTTTGCGAGATCGAAATCAAGCGTTCCGGGCTTTCC
TATCAAACAGCTGGTTGGGTTCGAGCGTGTCCACACGGCGGCTGGCAGTGCATCCAATGT
GGAGATTAGCGTCGACCCTTGCAAGCATATGAGCGCAGCCAATCCTGAAGGCAAAAGGGT
ACTGTTATTGGGTGACCATGTTCTGACGGTGGGTGATGAAGAGTTCGAATTATTCATTGA
ACTCTGACAGGGATGTACCAAGCCTTACCATTTACGGATCTGAAATTTGGAATAATCTGA
TGAATAAAACTTGTAAAGAAACACGCTGTAAAGATTCATCATTGAACTGGATGCAAGTAC
AGTAAACATGCTGTAAAGATTCATCATTGAGTTGGATGATAATACAGTTGCAGCCATTGC
AGT