Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12521
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:51039816:51042905:-1 gene:SORBI_3006G148800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAGCAACACGGCCATCCTCGAGAGCGACCCGCTCAGCTGGGGCAAGGCGGCCGCG
GAGCTGACGGGGAGCCACCTCGACGAGGTGAAGCGCATGGTGGCGCAGTTCCGCGACCCC
GTCGTCAAGATCGAGGGCTCCACGCTCCGCGTCGGCCAGGTGGCCGCCGTGGCCGCGGCC
AAGGACGCGTCCGGCGTGGCCGTCGAGCTGGACGAGGAGGCCCGCCCCCGCGTCAAGGCC
AGCAGCGAGTGGATCCTCGACTGCATCGCCCACGGCGGCGACATCTACGGCGTCACCACC
GGCTTCGGCGGCACCTCCCACCGCCGCACCAAGGACGGGCCCGCGCTCCAGGTCGAGCTG
CTCAGGCATCTCAATGCCGGAATCTTCGGCAATGGCTCCGACGGCCACACGCTCCCGTCC
GAGGTTTCGCGCGCGGCCATGCTCGTCCGCATCAACACCCTCCTCCAGGGCTACTCGGGC
ATCCGCTTCGAGATCCTCGAGGCCATCACCAAGCTCCTCAACACCGGCGTCAGCCCGTGC
CTGCCGCTGCGGGGCACCATCACGGCGTCGGGCGACCTCGTCCCGCTGTCCTACATCGCC
GGCCTCATCACGGGCCGCCCCAACGCGCAGGCCGTCACCGTGGACGGGAGGAAGGTGGAC
GCCGCCGAGGCGTTCAAGGTGGCCGGCATCCAGGGCGGCTTCTTCAAGCTCAACCCCAAG
GAGGGCCTGGCCATCGTCAACGGCACGTCCGTGGGGTCGGCGCTCGCCGCCATGGTGTGC
TTCGACGCCAACGTGCTCGCCGTCCTGTCCTCGGTCCTGTCCGCCGTCTTCTGCGAGGTG
ATGAACGGCAAGCCTGAGTACACCGACCACCTCACCCACAAGCTGAAGCACCACCCGGGG
TCCATCGAGTCCGCCGCCATCATGGAGCACATCCTGGACGGCAGCTCCTTCATGAAGCAC
GCCAAGGAGGTGAACGCCATGGACCCGCTGCTGAAGCCGAAGCAGGACAGGTACGCGCTC
CGCACGTCGCCGCAGTGGCTGGGCCCCCAGATCGAGGTCATCCGCGCCGCCACCAAGTCC
ATCGAGCGCGAGGTCAACTCGGTGAACGACAACCCGGTCATCGACGTCCACCGCGGAAAG
GCGCTGCACGGCGGCAACTTCCAGGGCACCCCGATCGGTGTCTCCATGGACAACGCCCGC
CTCGCCATCGCCAACATCGGCAAGCTCATGTTTGCCCAGTTCTCGGAGCTGGTGAACGAG
TTCTACAACAACGGGCTGACCTCCAACCTGGCCGGCAGCCGCAACCCGAGCCTGGACTAC
GGGTTCAAGGGCACCGAGATCGCCATGGCGTCCTACTGCTCGGAGCTCCAGTACCTGGCG
AACCCCATCACCAACCACGTCCAGAGCGCGGAGCAGCACAACCAGGACGTCAACTCCCTG
GGCCTCGTCTCCGCCAGGAAGACCGCCGAGGCCGTGGACATCCTCAAGCTCATGTCGTCC
ACGTACATGGTGGCGCTGTGCCAGGCCGTCGACCTGCGCCACCTCGAGGAGAACCTCAAG
AGCGCCGTCAAGAACTGCGTGATGGCGGCGGCCAGGAAAGTGCTCACCACTAGCCTCGAC
GGCGACCTCCACAGCGCGCGCTTCAGCGAGAAGGCCCTGCTCACCGCCATCGACCGCGAG
GCCGTGTACGGGTACTACGACGACCCCTGCAGCGCCAACTCGCCCCTGATGAAGAAGATC
CGCGCCGTGCTGGTGGACCACGCCCTCGCCAGCGGCGAGGCCGAGAAGGACGCCAGCGCG
TCCGTCTTCTCCAAGATCAACAGGTTCGAGGAGGCGCTAAGGGAGGCGCTGCCCAGGGAG
ATGGAGGCCGCCCGCGTGGCGTTCGAGACGGGCACGGCGCCGATCGGCAACAGGATCAAG
GACAGCCGGTCGTACCCGCTGTACCGCTTCATCCGCCAGGACCTCGGCGCCGTGTACCTG
ACCGGCGAGAAGCTCAAGTCCCCCGGCGAGGAGTGCAACAAGGTGTTCCTGGCGCTCAGC
GAGGGCAAGCTCATCGACCCCATGCTCGAGTGCCTCAAGGAGTGGGACGGCAAGCCCCTG
CCCATCTGCTAA

Peptide Sequence

PEP ID

EES12521
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:51039816:51042905:-1 gene:SORBI_3006G148800 transcript:EES12521 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASNTAILESDPLSWGKAAAELTGSHLDEVKRMVAQFRDPVVKIEGSTLRVGQVAAVAAA
KDASGVAVELDEEARPRVKASSEWILDCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVEL
LRHLNAGIFGNGSDGHTLPSEVSRAAMLVRINTLLQGYSGIRFEILEAITKLLNTGVSPC
LPLRGTITASGDLVPLSYIAGLITGRPNAQAVTVDGRKVDAAEAFKVAGIQGGFFKLNPK
EGLAIVNGTSVGSALAAMVCFDANVLAVLSSVLSAVFCEVMNGKPEYTDHLTHKLKHHPG
SIESAAIMEHILDGSSFMKHAKEVNAMDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKS
IEREVNSVNDNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNE
FYNNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPITNHVQSAEQHNQDVNSL
GLVSARKTAEAVDILKLMSSTYMVALCQAVDLRHLEENLKSAVKNCVMAAARKVLTTSLD
GDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHALASGEAEKDASA
SVFSKINRFEEALREALPREMEAARVAFETGTAPIGNRIKDSRSYPLYRFIRQDLGAVYL
TGEKLKSPGEECNKVFLALSEGKLIDPMLECLKEWDGKPLPIC

Transcript Sequence

Transcript ID

EES12521
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:51039816:51042905:-1 gene:SORBI_3006G148800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACTCCAATCTCTGGGTCTGGGATGAGAGATCCACCTCCACCACACCACTCAACTCACCA
ACCCGGTCGCCAACTAACCCACCAACACCCGGCCTCACCCACCTAAACCCCGCTGCTACG
ATCGCTAATGTAATGCCACCTATATAACCTCCTCGCCCCCGCTCCATCTCCCTCCAAGAA
GAGCTCCAGACTCAACTGCCCTCTCCCTCCCGAGCTCTTCTTCCACCACCACCACCGTCC
GCGTTAGCATCACACGCATCTCCTCCTCCCCGGTCGAAATGGCGAGCAACACGGCCATCC
TCGAGAGCGACCCGCTCAGCTGGGGCAAGGCGGCCGCGGAGCTGACGGGGAGCCACCTCG
ACGAGGTGAAGCGCATGGTGGCGCAGTTCCGCGACCCCGTCGTCAAGATCGAGGGCTCCA
CGCTCCGCGTCGGCCAGGTGGCCGCCGTGGCCGCGGCCAAGGACGCGTCCGGCGTGGCCG
TCGAGCTGGACGAGGAGGCCCGCCCCCGCGTCAAGGCCAGCAGCGAGTGGATCCTCGACT
GCATCGCCCACGGCGGCGACATCTACGGCGTCACCACCGGCTTCGGCGGCACCTCCCACC
GCCGCACCAAGGACGGGCCCGCGCTCCAGGTCGAGCTGCTCAGGCATCTCAATGCCGGAA
TCTTCGGCAATGGCTCCGACGGCCACACGCTCCCGTCCGAGGTTTCGCGCGCGGCCATGC
TCGTCCGCATCAACACCCTCCTCCAGGGCTACTCGGGCATCCGCTTCGAGATCCTCGAGG
CCATCACCAAGCTCCTCAACACCGGCGTCAGCCCGTGCCTGCCGCTGCGGGGCACCATCA
CGGCGTCGGGCGACCTCGTCCCGCTGTCCTACATCGCCGGCCTCATCACGGGCCGCCCCA
ACGCGCAGGCCGTCACCGTGGACGGGAGGAAGGTGGACGCCGCCGAGGCGTTCAAGGTGG
CCGGCATCCAGGGCGGCTTCTTCAAGCTCAACCCCAAGGAGGGCCTGGCCATCGTCAACG
GCACGTCCGTGGGGTCGGCGCTCGCCGCCATGGTGTGCTTCGACGCCAACGTGCTCGCCG
TCCTGTCCTCGGTCCTGTCCGCCGTCTTCTGCGAGGTGATGAACGGCAAGCCTGAGTACA
CCGACCACCTCACCCACAAGCTGAAGCACCACCCGGGGTCCATCGAGTCCGCCGCCATCA
TGGAGCACATCCTGGACGGCAGCTCCTTCATGAAGCACGCCAAGGAGGTGAACGCCATGG
ACCCGCTGCTGAAGCCGAAGCAGGACAGGTACGCGCTCCGCACGTCGCCGCAGTGGCTGG
GCCCCCAGATCGAGGTCATCCGCGCCGCCACCAAGTCCATCGAGCGCGAGGTCAACTCGG
TGAACGACAACCCGGTCATCGACGTCCACCGCGGAAAGGCGCTGCACGGCGGCAACTTCC
AGGGCACCCCGATCGGTGTCTCCATGGACAACGCCCGCCTCGCCATCGCCAACATCGGCA
AGCTCATGTTTGCCCAGTTCTCGGAGCTGGTGAACGAGTTCTACAACAACGGGCTGACCT
CCAACCTGGCCGGCAGCCGCAACCCGAGCCTGGACTACGGGTTCAAGGGCACCGAGATCG
CCATGGCGTCCTACTGCTCGGAGCTCCAGTACCTGGCGAACCCCATCACCAACCACGTCC
AGAGCGCGGAGCAGCACAACCAGGACGTCAACTCCCTGGGCCTCGTCTCCGCCAGGAAGA
CCGCCGAGGCCGTGGACATCCTCAAGCTCATGTCGTCCACGTACATGGTGGCGCTGTGCC
AGGCCGTCGACCTGCGCCACCTCGAGGAGAACCTCAAGAGCGCCGTCAAGAACTGCGTGA
TGGCGGCGGCCAGGAAAGTGCTCACCACTAGCCTCGACGGCGACCTCCACAGCGCGCGCT
TCAGCGAGAAGGCCCTGCTCACCGCCATCGACCGCGAGGCCGTGTACGGGTACTACGACG
ACCCCTGCAGCGCCAACTCGCCCCTGATGAAGAAGATCCGCGCCGTGCTGGTGGACCACG
CCCTCGCCAGCGGCGAGGCCGAGAAGGACGCCAGCGCGTCCGTCTTCTCCAAGATCAACA
GGTTCGAGGAGGCGCTAAGGGAGGCGCTGCCCAGGGAGATGGAGGCCGCCCGCGTGGCGT
TCGAGACGGGCACGGCGCCGATCGGCAACAGGATCAAGGACAGCCGGTCGTACCCGCTGT
ACCGCTTCATCCGCCAGGACCTCGGCGCCGTGTACCTGACCGGCGAGAAGCTCAAGTCCC
CCGGCGAGGAGTGCAACAAGGTGTTCCTGGCGCTCAGCGAGGGCAAGCTCATCGACCCCA
TGCTCGAGTGCCTCAAGGAGTGGGACGGCAAGCCCCTGCCCATCTGCTAAGCAGCAGGAC
GCCGCCACCGGCCGGCGCCGGCGCCAAGAGGCAAGAGGATCGAGGAGGAGATCACACCGT
ACCGTATGCGAGAAAGGAATAAAGAAGGGAGTATTTTTCAGTATTCTCAAGGCTTCATTT
CGTTTGCGATTTGAAGTTGAAGATTATTATTATATGTTGTTGTTCTGTGTTCGTCCTTTT
TTTGTGATTGTAGCAGTGATCCGTGCAAACGTGTATTCTGTCTCTGTTGTTCTTACCTTG
CTGCCATGTCATTGGCCATGGTCTGCCACTCAGCTTTTCTGATCTGTAATCTACTTATTT
TGAAGTAAAATGCACTACTACTATATTGAGTACGT