Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12488
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:50637129:50643006:-1 gene:SORBI_3006G144500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAACACGCCCGGGACCTTTGACAGAATGGCCATGGCAATGGATGGGGAACTTCAAG
TACCTGGTCCTGGTACCTGCGGTGCTGCACACTGCCCACAGGGTCGCAACCAAGGGGTGG
GGAGACCTTGACCCAGCATATGCCACCATGTTACCAGCCCTTCTGCTGAGGATGATCCAC
AACCAAATCTGGATCAGCTTGTCTCGCTATCAGACCGCTCGCAGAAAGAACGTGATTGTG
GACCGTAGTATTGAGTTCGAGCAGGTGGACCGGGAGAGGTCCTGGGATGACCAGATCATC
TTCAATGGGCTCGAGTTCTATCTGGCCTATGCAATGATCCCGAATGTCAGGCTCCTTCCG
ATCTGGAGAACTGATGGGGCCATCGTCACTGTGCTGCTTCACATGGGGCCTGTTGAGTTC
CTCTACTACTGGTTCCATAGAGCCTTGCACCACCATTTCCTCTACTCTCGCTACCACTCA
CACCACCATGCCTCCATCGTCACAGAACCCATAACCTCTGTCATCCATCCATTTGCTGAA
CATGTGGTATATTTCATGTTGTTTTCAATCCCGACATTAACACCCATTTTTATGGGCTGT
GGTTCTGTTCTGGGCATTGTCTTGTACATTGCGTACATTGACTTCATGAATAATATGGGG
CACTGCAATTTTGAACTGGTACCAAAGTGGATCTTCAAAGCCTTCCCTCCTCTGAAGTAT
CTCATGTACACCCCATCGTTTCACTCTCTACATCACACCCAGTTCCGCACAAACTACTCA
CTGTTCATGCCATTCTACGACTACATGTACAACACCATGGACAAGTCAAGCGATGAGCTG
TATGAGAAATCACTGAAAGTCACAGATGAAACACCAGATCTGGTTCACCTGACACATATG
ACCACCTTGCAATCGACTTATCATCTAAGGATTGGGATTGCCTCCATTGCTTCCAAACCA
TCCAACAAGCCAGTATGGTATAGCTGGATGATATGGCCTGTGGCTTTTCTATCAATGGTA
TTAGCATGGGTTTATGGATCGTCTGCATTTGTCATTGAGAGACTCCAAATGAAGAAGTTC
AAGATGCAGACATGGGCAATACCAAGATACAACTTCCAATATGGCATGACTTTGGAAAGA
GAATCCATTAATAGCTTGATCGAAAAGGCAATATTAGATGCTGATGAAAGGGGGGTCAAG
GTGCTCAGTCTAGGACTACTAAATCAGGCAAAGACACTTAATAGAAGCGGCGAACTATTT
ATACAAAAATATCCAAAACTAAGAGTGCGACTTGTTGATGGAAGTGGCCTAGCAACTGCA
GTGGTGCTCAAGAGCATCCCTTTTGGTACGAAGAAAGTGTTTCTTTCAAGAATTACTTCC
AAGGTAGCCCAGGGAACAGCTATCGCCTTATGTGAGATAGGTATCCAGGTAATCATGAAT
CAAAAGAAGGAACATGACATGCTCAAGTCACGACTTCCAGAGGGTAGAACTGTCTACCTA
AAATTCTCCAATAAAGACATACCTAAGATCTGGATAGGAGATAACATAGATGATAAACAG
CAACAGAGGGCACCAAAAGGAACAACGTTCATTCCTACATCACAGTTTCCACTTAAGAAG
ATCCGCAGGGATTGCACTTACTTGAGTACTCCGGCAATGAAGATCCCAGAGACAATGGAA
AATGTTCACACCTGTGAGAATTGGCTGCCCAGAAGGGTCATGAGTGCCTGGCGTATTGCT
GGAATACTGCATGCTCTGGAAGGTTGGGATATGCATGAGAGCGGCGACGATATGATGGAC
ATCGATAAGACTTGGTCGGCAGCTATTAAGCACGGATTTGCTCCTCTGACAAAATATTGA

Peptide Sequence

PEP ID

EES12488
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:50637129:50643006:-1 gene:SORBI_3006G144500 transcript:EES12488 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATRPGPLTEWPWQWMGNFKYLVLVPAVLHTAHRVATKGWGDLDPAYATMLPALLLRMIH
NQIWISLSRYQTARRKNVIVDRSIEFEQVDRERSWDDQIIFNGLEFYLAYAMIPNVRLLP
IWRTDGAIVTVLLHMGPVEFLYYWFHRALHHHFLYSRYHSHHHASIVTEPITSVIHPFAE
HVVYFMLFSIPTLTPIFMGCGSVLGIVLYIAYIDFMNNMGHCNFELVPKWIFKAFPPLKY
LMYTPSFHSLHHTQFRTNYSLFMPFYDYMYNTMDKSSDELYEKSLKVTDETPDLVHLTHM
TTLQSTYHLRIGIASIASKPSNKPVWYSWMIWPVAFLSMVLAWVYGSSAFVIERLQMKKF
KMQTWAIPRYNFQYGMTLERESINSLIEKAILDADERGVKVLSLGLLNQAKTLNRSGELF
IQKYPKLRVRLVDGSGLATAVVLKSIPFGTKKVFLSRITSKVAQGTAIALCEIGIQVIMN
QKKEHDMLKSRLPEGRTVYLKFSNKDIPKIWIGDNIDDKQQQRAPKGTTFIPTSQFPLKK
IRRDCTYLSTPAMKIPETMENVHTCENWLPRRVMSAWRIAGILHALEGWDMHESGDDMMD
IDKTWSAAIKHGFAPLTKY

Transcript Sequence

Transcript ID

EES12488
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:50637129:50643006:-1 gene:SORBI_3006G144500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAATTCAGGTCTTGATGGTTATTACATATATTTTATAATAAAATTGAAGCTTTGGTTCA
TTGCAATTTATGTAGGCATAATCTGCAAATTTTGGTTCTGAGAATAACCCGTTAGACAAA
ACTACAAAACCAATAAATTCCGATTCGTATTAACATAAAGACAATTAACAATTTATATAT
ATTTTCTATAGACAGACAAGGACAAAAAATTTAATATATTATGATACAAAGAGAAATAAC
AAAAGTAAAAATTTACTTATACTAGTTGTACAAGAGTTGTTGCCTGAAATTATCTTAAAA
TTTGGGCACCTAAAATATAGGAGAAGTGTTATTATATTATAATACTGAGAGCAGCACAAC
ATTTTCACAAGATGACTGACAAAAAGGAAGAATCTAAGAGAGGCTTTTGAAAACATATAC
TTTTGGAGGTGTTTTTTGCTAAATCCTACTGTCCCTCCCTGCACCCTGCATATAAAATGC
GAGGGGAGCTTGAAGCGCTTACCAAAATAGCATAGCTAGCTGAGGTAACTGCTTATCCCA
GGAAGAAAGCAAGGTCTCCTTCATCACCATGGCAACACGCCCGGGACCTTTGACAGAATG
GCCATGGCAATGGATGGGGAACTTCAAGTACCTGGTCCTGGTACCTGCGGTGCTGCACAC
TGCCCACAGGGTCGCAACCAAGGGGTGGGGAGACCTTGACCCAGCATATGCCACCATGTT
ACCAGCCCTTCTGCTGAGGATGATCCACAACCAAATCTGGATCAGCTTGTCTCGCTATCA
GACCGCTCGCAGAAAGAACGTGATTGTGGACCGTAGTATTGAGTTCGAGCAGGTGGACCG
GGAGAGGTCCTGGGATGACCAGATCATCTTCAATGGGCTCGAGTTCTATCTGGCCTATGC
AATGATCCCGAATGTCAGGCTCCTTCCGATCTGGAGAACTGATGGGGCCATCGTCACTGT
GCTGCTTCACATGGGGCCTGTTGAGTTCCTCTACTACTGGTTCCATAGAGCCTTGCACCA
CCATTTCCTCTACTCTCGCTACCACTCACACCACCATGCCTCCATCGTCACAGAACCCAT
AACCTCTGTCATCCATCCATTTGCTGAACATGTGGTATATTTCATGTTGTTTTCAATCCC
GACATTAACACCCATTTTTATGGGCTGTGGTTCTGTTCTGGGCATTGTCTTGTACATTGC
GTACATTGACTTCATGAATAATATGGGGCACTGCAATTTTGAACTGGTACCAAAGTGGAT
CTTCAAAGCCTTCCCTCCTCTGAAGTATCTCATGTACACCCCATCGTTTCACTCTCTACA
TCACACCCAGTTCCGCACAAACTACTCACTGTTCATGCCATTCTACGACTACATGTACAA
CACCATGGACAAGTCAAGCGATGAGCTGTATGAGAAATCACTGAAAGTCACAGATGAAAC
ACCAGATCTGGTTCACCTGACACATATGACCACCTTGCAATCGACTTATCATCTAAGGAT
TGGGATTGCCTCCATTGCTTCCAAACCATCCAACAAGCCAGTATGGTATAGCTGGATGAT
ATGGCCTGTGGCTTTTCTATCAATGGTATTAGCATGGGTTTATGGATCGTCTGCATTTGT
CATTGAGAGACTCCAAATGAAGAAGTTCAAGATGCAGACATGGGCAATACCAAGATACAA
CTTCCAATATGGCATGACTTTGGAAAGAGAATCCATTAATAGCTTGATCGAAAAGGCAAT
ATTAGATGCTGATGAAAGGGGGGTCAAGGTGCTCAGTCTAGGACTACTAAATCAGGCAAA
GACACTTAATAGAAGCGGCGAACTATTTATACAAAAATATCCAAAACTAAGAGTGCGACT
TGTTGATGGAAGTGGCCTAGCAACTGCAGTGGTGCTCAAGAGCATCCCTTTTGGTACGAA
GAAAGTGTTTCTTTCAAGAATTACTTCCAAGGTAGCCCAGGGAACAGCTATCGCCTTATG
TGAGATAGGTATCCAGGTAATCATGAATCAAAAGAAGGAACATGACATGCTCAAGTCACG
ACTTCCAGAGGGTAGAACTGTCTACCTAAAATTCTCCAATAAAGACATACCTAAGATCTG
GATAGGAGATAACATAGATGATAAACAGCAACAGAGGGCACCAAAAGGAACAACGTTCAT
TCCTACATCACAGTTTCCACTTAAGAAGATCCGCAGGGATTGCACTTACTTGAGTACTCC
GGCAATGAAGATCCCAGAGACAATGGAAAATGTTCACACCTGTGAGAATTGGCTGCCCAG
AAGGGTCATGAGTGCCTGGCGTATTGCTGGAATACTGCATGCTCTGGAAGGTTGGGATAT
GCATGAGAGCGGCGACGATATGATGGACATCGATAAGACTTGGTCGGCAGCTATTAAGCA
CGGATTTGCTCCTCTGACAAAATATTGATTCTTCTGAATCATAGCAGACACCAGTAGACG
ATGCAGGTTATGCAACTACTATGCAAAGCAAGTTTTTCGGTATGAAGAAGAAGAAGAAGA
AGCATCACAAGTGCTTATTATTGGTTTGCTAGCCTTGTCAAACAGTCCTTCATTGTAATC
TCCTAAAGGGAAGGATTAAAATAAGGGGCTGAACTCCAAACTCTATCAAGAGCTAAGTAC
TCTGGCTTGTAGAATGCGATATATGTAATATCAACGGTTATGCAGTATTGAGGTGCAGTA
GTAAAATGTCAATAATGTACCGATGGTCTTCAAATGCAAGCAATTTATCA