Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12338
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:48250794:48253096:-1 gene:SORBI_3006G114700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCCCACCGCCGCCCGCAGCTCCGGCGGCACCCCCGCCGCCGCCGAAAACGACGCC
ACCGCGCCGACCAACACCACCGTGACGCTCCCGCCGCTCACCCTCCGCGACGTGCCGCGC
CTCCCCTCCGCGCTAGCCTCCGCCGCATCCCCGTCCCCGACCCCGGCGGTCCAGAACCCC
ATCTCGCGCCACCCCTACTTCCACCCGCCGGCCACCTTCTACATCTCGCCGGGGGACGTT
ACCCTCCGCCACGCCTTCTTCGACCTGGCCTCCGCGGCGCCGTCCCCGCTCGTCGCCTAC
CGCCGCGCGGGGCCCCGCGGGGAGATCGCCGTCGACCCGGCCGCGGCGCGCGCCGCGCTC
GTCACCTGCGGGGGGCTCTGCCCCGGGCTCAACACCGTGCTCAGGGAGCTCGTCGTGGGG
CTCCACGAGCTCTACGGCGTCCGCCACGTCTTCGGCGTCGCCGCGGGATACCGAGGGTTC
TATGGCACCGACGAGGATCACGTCAGGCTCGACCCCGCCGCCGTCGACGACTGGCACAAG
AAGGGCGGCACCGTGCTCAAGACCACGAGGGGTGGCTTCGATCTCGGCAAGATCGTCGAC
GGCATCGTCGCGCGCGGGTATACGCAGATATATGCGATCGGTGGGGATGGAACCATGAGA
GGAGCTGTGGCAATCTTTCAAGAGTTCAAACGCCGCGGTTTGAACATATCCATCACTGGG
ATCCCAAAAACTGTGGACAATGACATTGGCATCATAGACAGATCATTCGGTTTCCAAACT
GCGGTGGAGATTGCTCAGCAGGCAATTGACGCTGCTCATGTGGAGGCTGTTAGCGCTGTC
AATGGTGTAGGCCTTGTCAAACTTATGGGGAGGAGTACTGGCCATATCGCCCTTCATGCC
ACTCTGAGCAGTCGCGATGTTGACTGCTGCTTGATCCCAGAGGTTGATTTCCACCTGGAA
GGTAAGGGTGGCCTGTTTGAGTTTCTGTATGAACGGATTAAGAAGAAGGGGCATGCTGTC
ATCGTGGTTGCTGAAGGAGCTGGTCAGGAACTGATTCCCCGGACTGATGATCAGAAGCGA
GAGCAGGATGAGTCTGGCAACATTGTGTTTCTTGATGTGGGACCCTGGCTGAAATCCGAG
CTGGGCAGATGGTGGAAGAGAGAACATCCTGATGAGCTGTTCACTGTGAAGTACATTGAC
CCTACATACATGATTCGAGCGGTTCCTGCAAATGCCACCGACAATTTGTATTGCACTTTG
CTGGCACATTCTGCCATCCATGGGGTCATGGCTGGGTTTACTGGCTTTGTACCTGGTCCA
GTAAATGGGACCTACAGTTACATACCACTGGAAGATGTCGCTGTGGCAAAGAACCCTGTC
GATGTGAATGATCACAAATGGGCATGGGTTAGATCAGTTACAAATCAGCCAGATTTCCTC
AAATCCCAAGCATAG

Peptide Sequence

PEP ID

EES12338
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:48250794:48253096:-1 gene:SORBI_3006G114700 transcript:EES12338 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPTAARSSGGTPAAAENDATAPTNTTVTLPPLTLRDVPRLPSALASAASPSPTPAVQNP
ISRHPYFHPPATFYISPGDVTLRHAFFDLASAAPSPLVAYRRAGPRGEIAVDPAAARAAL
VTCGGLCPGLNTVLRELVVGLHELYGVRHVFGVAAGYRGFYGTDEDHVRLDPAAVDDWHK
KGGTVLKTTRGGFDLGKIVDGIVARGYTQIYAIGGDGTMRGAVAIFQEFKRRGLNISITG
IPKTVDNDIGIIDRSFGFQTAVEIAQQAIDAAHVEAVSAVNGVGLVKLMGRSTGHIALHA
TLSSRDVDCCLIPEVDFHLEGKGGLFEFLYERIKKKGHAVIVVAEGAGQELIPRTDDQKR
EQDESGNIVFLDVGPWLKSELGRWWKREHPDELFTVKYIDPTYMIRAVPANATDNLYCTL
LAHSAIHGVMAGFTGFVPGPVNGTYSYIPLEDVAVAKNPVDVNDHKWAWVRSVTNQPDFL
KSQA

Transcript Sequence

Transcript ID

EES12338
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:48250794:48253096:-1 gene:SORBI_3006G114700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCCCACCGCCGCCCGCAGCTCCGGCGGCACCCCCGCCGCCGCCGAAAACGACGCC
ACCGCGCCGACCAACACCACCGTGACGCTCCCGCCGCTCACCCTCCGCGACGTGCCGCGC
CTCCCCTCCGCGCTAGCCTCCGCCGCATCCCCGTCCCCGACCCCGGCGGTCCAGAACCCC
ATCTCGCGCCACCCCTACTTCCACCCGCCGGCCACCTTCTACATCTCGCCGGGGGACGTT
ACCCTCCGCCACGCCTTCTTCGACCTGGCCTCCGCGGCGCCGTCCCCGCTCGTCGCCTAC
CGCCGCGCGGGGCCCCGCGGGGAGATCGCCGTCGACCCGGCCGCGGCGCGCGCCGCGCTC
GTCACCTGCGGGGGGCTCTGCCCCGGGCTCAACACCGTGCTCAGGGAGCTCGTCGTGGGG
CTCCACGAGCTCTACGGCGTCCGCCACGTCTTCGGCGTCGCCGCGGGATACCGAGGGTTC
TATGGCACCGACGAGGATCACGTCAGGCTCGACCCCGCCGCCGTCGACGACTGGCACAAG
AAGGGCGGCACCGTGCTCAAGACCACGAGGGGTGGCTTCGATCTCGGCAAGATCGTCGAC
GGCATCGTCGCGCGCGGGTATACGCAGATATATGCGATCGGTGGGGATGGAACCATGAGA
GGAGCTGTGGCAATCTTTCAAGAGTTCAAACGCCGCGGTTTGAACATATCCATCACTGGG
ATCCCAAAAACTGTGGACAATGACATTGGCATCATAGACAGATCATTCGGTTTCCAAACT
GCGGTGGAGATTGCTCAGCAGGCAATTGACGCTGCTCATGTGGAGGCTGTTAGCGCTGTC
AATGGTGTAGGCCTTGTCAAACTTATGGGGAGGAGTACTGGCCATATCGCCCTTCATGCC
ACTCTGAGCAGTCGCGATGTTGACTGCTGCTTGATCCCAGAGGTTGATTTCCACCTGGAA
GGTAAGGGTGGCCTGTTTGAGTTTCTGTATGAACGGATTAAGAAGAAGGGGCATGCTGTC
ATCGTGGTTGCTGAAGGAGCTGGTCAGGAACTGATTCCCCGGACTGATGATCAGAAGCGA
GAGCAGGATGAGTCTGGCAACATTGTGTTTCTTGATGTGGGACCCTGGCTGAAATCCGAG
CTGGGCAGATGGTGGAAGAGAGAACATCCTGATGAGCTGTTCACTGTGAAGTACATTGAC
CCTACATACATGATTCGAGCGGTTCCTGCAAATGCCACCGACAATTTGTATTGCACTTTG
CTGGCACATTCTGCCATCCATGGGGTCATGGCTGGGTTTACTGGCTTTGTACCTGGTCCA
GTAAATGGGACCTACAGTTACATACCACTGGAAGATGTCGCTGTGGCAAAGAACCCTGTC
GATGTGAATGATCACAAATGGGCATGGGTTAGATCAGTTACAAATCAGCCAGATTTCCTC
AAATCCCAAGCATAGTACCTAAAGTCCAGCGGCTGTTCCTCCCTGGAACCATTGAATTAG
ACTTTCTTCTGATCCAGTTGCCTGCCTCCCTAGTTATTTTCTGTTCAATAAGGTGGTAGC
TTTTATGCTCTCCAGTTTGTGCTTGTGGAACACTTTTGAGAATATGTCCGTAGCAATCGT
TGTGCTTGTACATATGTTGATATTATCATTCTCATGAATAAACGATGCTTTGG