Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12286
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:47566046:47568071:-1 gene:SORBI_3006G105500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAAAGGCTCTCCTAGGTGGCCTGTCGGCGATCCTCGTCGTCGCAGTGGTCGTCGGC
GTGGTCGCCACCGTCACTCGCTCCGGCAAGAAGGCCGGCGACAACTTCAACGTCCCGGGG
GATGCCTCCCTTGCCACGTCCGGCAAGTCGGTCAAGTCCCTGTGCGCGCCCACGCTGTAC
AAGGATTCGTGCGAGAAGACGCTCTCCCAGGCCACCAATGGAACCGAGAACCCCAAGGAG
ATCTTCCACAGCGTCGCCAAGGTGGCGCTGGAGTCGGTGAAGACGGCGGTGGAGCAGTCC
AAGAACATCGGCGAGGCCAAGGCCAGCGACAAGATGACAGAGAGCGCGCGCGAGGACTGC
AAGAAGCTCCTCGAGGACGCCGTGGACGACCTCAGGGGCATGCTGGATATGGCCGGCGGC
GACATCAAGGTGCTCTTCAGCCGGTCCGACGACCTCGAGACGTGGCTCACGGGCGTGATG
ACGTTCATGGACACCTGCATCGACGGCTTCGTGGACGAGAAGCTCAGGGCCGACATGCAC
TCGGTGCTGCGCAACGCCACCGAGCTCAGCAGCAACGCGCTCGCCATCACCAACAGCCTC
GGCGGGATCCTGAAGAAGCTGGACCTCGACATGTTCAAGAAGGACTCGCGGCGCCGGCTG
CTGTCGTCGGAGCAGGACGAGAAGGGGTGGCCCGTGTGGATGAGGTCGCCGGAGAGGAAG
CTGCTGGCGGCGGGCAACCAGCCTAAGCCGAACGCCGTGGTGGCCAAGGACGGCAGCGGG
CAGTTCAAGAGCATCCAGCAGGCCGTGGACGCCATGCCCAAGGGCCAGCAGGGGAGGTAC
GTCATCTACGTGAAGGCCGGTGTCTACGACGAGATCGTCATGATCGCCAAGGACAAGGTC
AACATCTTCATGTACGGCGACGGGCCCAAGAATACCCGCGTGACCGGCCAGAAGAGCTTC
GCCGACGGCATCACCACCATGAAGACCGCCACCTTCTCCATCGAGGCGGCCGGGTTCATC
TGCAAGAACATGGGGTTCCACAACACGGCCGGCGCGGCGAAGCACCAGGCGGTGGCGCTC
CGCGTCCAGGGCGACCTCGCGGCGTTCTACAACTGCAGGTTCGACGCGTTCCAGGACACG
CTGTACGTGCACGCCAGGCGGCAGTTCTTCCGCAACTGCGTCATCTCCGGCACCATCGAC
TTCATCTTCGGCAACTCGGCGGCGGTGTTCCAGAACTGCCTCATCATCACGCGGCGGCCC
ATGGACAACCAGCAGAACTCGGTGACGGCGCACGGGCGCACGGACCCCAACATGAAGTCC
GGGATCGTCATCCAGAACTGCCGGCTGGTGCCCGACCAGAAGCTCTTCGCCGACCGCTTC
AAGATCCCCTCGTACCTGGGCCGTCCATGGAAGGAGTTCTCGCGCCTCGTCATCATGGAG
AGCACCATCGCCGACTTCATCAAGCCGGAGGGGTACATGCCCTGGAACGGCGACTTCGGC
ATCAAGACGCTCTTCTACGCCGAGTACAACAACCGCGGGCCCGGCGCCGGCACCAGCAAG
AGGGTCAACTGGCCTGGGTTCCACGTCATCACCCGGAAGGACGCCGAGCAGTTCACCGCC
GGGCCGTTCATCGACGGCGCGCTGTGGCTCAAGTTCACCGGCACGCCGCACATCCTCGGG
TTCAAGTCCTAA

Peptide Sequence

PEP ID

EES12286
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:47566046:47568071:-1 gene:SORBI_3006G105500 transcript:EES12286 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAKALLGGLSAILVVAVVVGVVATVTRSGKKAGDNFNVPGDASLATSGKSVKSLCAPTLY
KDSCEKTLSQATNGTENPKEIFHSVAKVALESVKTAVEQSKNIGEAKASDKMTESAREDC
KKLLEDAVDDLRGMLDMAGGDIKVLFSRSDDLETWLTGVMTFMDTCIDGFVDEKLRADMH
SVLRNATELSSNALAITNSLGGILKKLDLDMFKKDSRRRLLSSEQDEKGWPVWMRSPERK
LLAAGNQPKPNAVVAKDGSGQFKSIQQAVDAMPKGQQGRYVIYVKAGVYDEIVMIAKDKV
NIFMYGDGPKNTRVTGQKSFADGITTMKTATFSIEAAGFICKNMGFHNTAGAAKHQAVAL
RVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIITRRP
MDNQQNSVTAHGRTDPNMKSGIVIQNCRLVPDQKLFADRFKIPSYLGRPWKEFSRLVIME
STIADFIKPEGYMPWNGDFGIKTLFYAEYNNRGPGAGTSKRVNWPGFHVITRKDAEQFTA
GPFIDGALWLKFTGTPHILGFKS

Transcript Sequence

Transcript ID

EES12286
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:47566046:47568071:-1 gene:SORBI_3006G105500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GATGGCAAAGGCTCTCCTAGGTGGCCTGTCGGCGATCCTCGTCGTCGCAGTGGTCGTCGG
CGTGGTCGCCACCGTCACTCGCTCCGGCAAGAAGGCCGGCGACAACTTCAACGTCCCGGG
GGATGCCTCCCTTGCCACGTCCGGCAAGTCGGTCAAGTCCCTGTGCGCGCCCACGCTGTA
CAAGGATTCGTGCGAGAAGACGCTCTCCCAGGCCACCAATGGAACCGAGAACCCCAAGGA
GATCTTCCACAGCGTCGCCAAGGTGGCGCTGGAGTCGGTGAAGACGGCGGTGGAGCAGTC
CAAGAACATCGGCGAGGCCAAGGCCAGCGACAAGATGACAGAGAGCGCGCGCGAGGACTG
CAAGAAGCTCCTCGAGGACGCCGTGGACGACCTCAGGGGCATGCTGGATATGGCCGGCGG
CGACATCAAGGTGCTCTTCAGCCGGTCCGACGACCTCGAGACGTGGCTCACGGGCGTGAT
GACGTTCATGGACACCTGCATCGACGGCTTCGTGGACGAGAAGCTCAGGGCCGACATGCA
CTCGGTGCTGCGCAACGCCACCGAGCTCAGCAGCAACGCGCTCGCCATCACCAACAGCCT
CGGCGGGATCCTGAAGAAGCTGGACCTCGACATGTTCAAGAAGGACTCGCGGCGCCGGCT
GCTGTCGTCGGAGCAGGACGAGAAGGGGTGGCCCGTGTGGATGAGGTCGCCGGAGAGGAA
GCTGCTGGCGGCGGGCAACCAGCCTAAGCCGAACGCCGTGGTGGCCAAGGACGGCAGCGG
GCAGTTCAAGAGCATCCAGCAGGCCGTGGACGCCATGCCCAAGGGCCAGCAGGGGAGGTA
CGTCATCTACGTGAAGGCCGGTGTCTACGACGAGATCGTCATGATCGCCAAGGACAAGGT
CAACATCTTCATGTACGGCGACGGGCCCAAGAATACCCGCGTGACCGGCCAGAAGAGCTT
CGCCGACGGCATCACCACCATGAAGACCGCCACCTTCTCCATCGAGGCGGCCGGGTTCAT
CTGCAAGAACATGGGGTTCCACAACACGGCCGGCGCGGCGAAGCACCAGGCGGTGGCGCT
CCGCGTCCAGGGCGACCTCGCGGCGTTCTACAACTGCAGGTTCGACGCGTTCCAGGACAC
GCTGTACGTGCACGCCAGGCGGCAGTTCTTCCGCAACTGCGTCATCTCCGGCACCATCGA
CTTCATCTTCGGCAACTCGGCGGCGGTGTTCCAGAACTGCCTCATCATCACGCGGCGGCC
CATGGACAACCAGCAGAACTCGGTGACGGCGCACGGGCGCACGGACCCCAACATGAAGTC
CGGGATCGTCATCCAGAACTGCCGGCTGGTGCCCGACCAGAAGCTCTTCGCCGACCGCTT
CAAGATCCCCTCGTACCTGGGCCGTCCATGGAAGGAGTTCTCGCGCCTCGTCATCATGGA
GAGCACCATCGCCGACTTCATCAAGCCGGAGGGGTACATGCCCTGGAACGGCGACTTCGG
CATCAAGACGCTCTTCTACGCCGAGTACAACAACCGCGGGCCCGGCGCCGGCACCAGCAA
GAGGGTCAACTGGCCTGGGTTCCACGTCATCACCCGGAAGGACGCCGAGCAGTTCACCGC
CGGGCCGTTCATCGACGGCGCGCTGTGGCTCAAGTTCACCGGCACGCCGCACATCCTCGG
GTTCAAGTCCTAAAGGCCGCATGGCATGGCATGGCATGGCATGGAGCGATAGTGAGGTGG
CAGTGGCACGTACGTACATTTTGGTGTGTATGTACAATGATCGACAGACGTGCAAGCAGA
TATATGTACCTGAGGTGTCGCAGGACAGGAGGGCTAACGTTAACGTTTGTACCTTTACCA
ATTTTCTTTCCTTTTTCATTCCTTTGGTTGTTGCTCTTGGTGAAATTCTTCAGTAAATGA
AAAGTCTTTTGGA