Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12255
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:46733244:46735769:-1 gene:SORBI_3006G097900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCAGAAGAAGGTGATGAGGTCTCACTTGTCACCGTGGCGTGGATTGGCGACGCCG
ACGCGACGGCGGTGGTGCCAAGCGGCCGCGCGGCCGACGACGGTTCTTGTGATCGCGGTG
ACCGTCTTCGCCGCGCTGCTCCTCGCCGTCGTCCTCTTCGGCGTCCGGTTAACGCCCTCG
GGCGTCTCGGCCGGAGTACGCGTCGTCCTGAAAGCTGTGTCGTCCGACCAAGGCACCGGT
CGTGGTCCATTGGCGACGGTGCCGGATCCCAGCGACCGGCTGCTGGGCGGCCTCCTCTCG
CCGGACTTCGACGACAGCTCCTGCCTCAGCCGCTACAGCGCCGCGCTGTACCGCCGGCCG
TCACTGCACGCCGTTTCCTCCTACCTCGTCTCCGCGCTCCGCCGCTACGAGTCGCTGCAC
CGCCGCTGCGGCCCCGGCACTCCAGCCTACGCGCGCGCCGTCGAACTCCTGCGCGCGAAC
GCCTCCGCTGCTACGACGACGACTTCGTCCTCCGCCGCCGCCTCCGGATCGTGCAGCTAC
GCCGTGTGGACGCCGATCGAGGGCCTCGGCAACCGCATCCTCTCCATCACCTCTACCTTC
CTGTACGCGCTCCTCACCGACCGCGTCCTCCTCCTCCACAGCAGCAGCGACGAGCTCGAC
GACCTCTTCTGCGAGCCGTTCCCGGGCTCCACGTGGAGGATCCCGCCGCCGGCGGACGAC
AAGGACAAGGACGGCGGCTTCCCCATCGGTGGCATCGAGAAGCTCACCGGCTGGTGGCAC
CGCGACAGCCTTGGCTCCGCGCTGAGGCGCGGCGAGGACCCCGGCGTGGCGCCGTGGCTG
TACGTGCACCTGCGGCACGACTACACCAAGGACAACCGCGACCAGCAGTTCTTCTGCGAC
GACACGCAGGCCAAGCTGGGGACCGTGCCGTGGCTCGTGTTCCGGTCCGACAACTACTTC
GTGCCGGGGCTGTTCCTGATGCCACGGCACGAGGCGGAGCTGTCGCGCATGTTCCCGCGC
CGCGACGTCGTGTTCCACCACCTCGGCCGCTACCTGTTCCACCCGAGCGACACGGTGTGG
GGCATGGTGACCCGGTACCACCGCTCGTTCTTCGCCAAGGCGGCGGACGAGCGCGTCGGC
ATCCAGGTGCGCAGGTTCTATTGGGCGCCCATCTCCACCGACGACCTCTTCGGCCAGATC
CTCAACTGCACGCAACGCGAGGACATCCTGCCCGGCGTTCCGGCGGCGGCGGCGGCCAAA
GGCAGCAGCAGCACCGCCGGCGCCGGGAACGGCGGCCAGCAGGCTGGGAAACAGAAGGCC
GTGCTCGTCGTGTCCCTGCACCGGGAGTACTCCGAGAAGCTCAGGGACATGTACCACGAG
CACGGAGGAGCGGTGAGCGTGTACCAGCCGACGCACCTGGGCTCGCAGCGCTCCGGCGAG
CGGGAGCACAACCAGAAGGCGCTCGCGGAGATGGTGCTGCTCAGCTTCTCGGACGCGGTG
GTCACCTCCGCCGCATCGACGTTTGGGTACGTCGGGCAGGGGCTGGCGGGGCTGAGGCCA
TGGGTGCTTACGAGCCCCGTCGACAAGAAGGCGCCCGACACGCCGTGCCGGCGCGCCGCC
ACCATGGAGCCGTGCTTCCATGTGCCGCTCGACTACGATTGTCGGGCGAAAGCGAAAGGT
GACGCCGGCAGGAGGGTGCGCCACATCCGACACTGCGAGGACTTCCCGCAGGGTGTGCAG
TTGCTGGAATGA

Peptide Sequence

PEP ID

EES12255
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:46733244:46735769:-1 gene:SORBI_3006G097900 transcript:EES12255 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDQKKVMRSHLSPWRGLATPTRRRWCQAAARPTTVLVIAVTVFAALLLAVVLFGVRLTPS
GVSAGVRVVLKAVSSDQGTGRGPLATVPDPSDRLLGGLLSPDFDDSSCLSRYSAALYRRP
SLHAVSSYLVSALRRYESLHRRCGPGTPAYARAVELLRANASAATTTTSSSAAASGSCSY
AVWTPIEGLGNRILSITSTFLYALLTDRVLLLHSSSDELDDLFCEPFPGSTWRIPPPADD
KDKDGGFPIGGIEKLTGWWHRDSLGSALRRGEDPGVAPWLYVHLRHDYTKDNRDQQFFCD
DTQAKLGTVPWLVFRSDNYFVPGLFLMPRHEAELSRMFPRRDVVFHHLGRYLFHPSDTVW
GMVTRYHRSFFAKAADERVGIQVRRFYWAPISTDDLFGQILNCTQREDILPGVPAAAAAK
GSSSTAGAGNGGQQAGKQKAVLVVSLHREYSEKLRDMYHEHGGAVSVYQPTHLGSQRSGE
REHNQKALAEMVLLSFSDAVVTSAASTFGYVGQGLAGLRPWVLTSPVDKKAPDTPCRRAA
TMEPCFHVPLDYDCRAKAKGDAGRRVRHIRHCEDFPQGVQLLE

Transcript Sequence

Transcript ID

EES12255
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:46733244:46735769:-1 gene:SORBI_3006G097900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGTGCCTCCAATATTCACATTCCCTGACTGGCTAGCGCCCATGGACTTTGGCACGATCGT
CGAAGCATTGACCCGGCAAGTCTGTCCTACTTGTTGCGGTTGCGTCTTGAGGCTGCAAGC
TACCGCGCTTCATAAAGCACGTCCATCGCTAGCTATCAGCATGCATGCAGTAGCAAAGTT
TTGTTCCTAGTTCTAGCTAGCTAGGCAATTAGCAGCAGTCAATATCGAGTCATGGATCAG
AAGAAGGTGATGAGGTCTCACTTGTCACCGTGGCGTGGATTGGCGACGCCGACGCGACGG
CGGTGGTGCCAAGCGGCCGCGCGGCCGACGACGGTTCTTGTGATCGCGGTGACCGTCTTC
GCCGCGCTGCTCCTCGCCGTCGTCCTCTTCGGCGTCCGGTTAACGCCCTCGGGCGTCTCG
GCCGGAGTACGCGTCGTCCTGAAAGCTGTGTCGTCCGACCAAGGCACCGGTCGTGGTCCA
TTGGCGACGGTGCCGGATCCCAGCGACCGGCTGCTGGGCGGCCTCCTCTCGCCGGACTTC
GACGACAGCTCCTGCCTCAGCCGCTACAGCGCCGCGCTGTACCGCCGGCCGTCACTGCAC
GCCGTTTCCTCCTACCTCGTCTCCGCGCTCCGCCGCTACGAGTCGCTGCACCGCCGCTGC
GGCCCCGGCACTCCAGCCTACGCGCGCGCCGTCGAACTCCTGCGCGCGAACGCCTCCGCT
GCTACGACGACGACTTCGTCCTCCGCCGCCGCCTCCGGATCGTGCAGCTACGCCGTGTGG
ACGCCGATCGAGGGCCTCGGCAACCGCATCCTCTCCATCACCTCTACCTTCCTGTACGCG
CTCCTCACCGACCGCGTCCTCCTCCTCCACAGCAGCAGCGACGAGCTCGACGACCTCTTC
TGCGAGCCGTTCCCGGGCTCCACGTGGAGGATCCCGCCGCCGGCGGACGACAAGGACAAG
GACGGCGGCTTCCCCATCGGTGGCATCGAGAAGCTCACCGGCTGGTGGCACCGCGACAGC
CTTGGCTCCGCGCTGAGGCGCGGCGAGGACCCCGGCGTGGCGCCGTGGCTGTACGTGCAC
CTGCGGCACGACTACACCAAGGACAACCGCGACCAGCAGTTCTTCTGCGACGACACGCAG
GCCAAGCTGGGGACCGTGCCGTGGCTCGTGTTCCGGTCCGACAACTACTTCGTGCCGGGG
CTGTTCCTGATGCCACGGCACGAGGCGGAGCTGTCGCGCATGTTCCCGCGCCGCGACGTC
GTGTTCCACCACCTCGGCCGCTACCTGTTCCACCCGAGCGACACGGTGTGGGGCATGGTG
ACCCGGTACCACCGCTCGTTCTTCGCCAAGGCGGCGGACGAGCGCGTCGGCATCCAGGTG
CGCAGGTTCTATTGGGCGCCCATCTCCACCGACGACCTCTTCGGCCAGATCCTCAACTGC
ACGCAACGCGAGGACATCCTGCCCGGCGTTCCGGCGGCGGCGGCGGCCAAAGGCAGCAGC
AGCACCGCCGGCGCCGGGAACGGCGGCCAGCAGGCTGGGAAACAGAAGGCCGTGCTCGTC
GTGTCCCTGCACCGGGAGTACTCCGAGAAGCTCAGGGACATGTACCACGAGCACGGAGGA
GCGGTGAGCGTGTACCAGCCGACGCACCTGGGCTCGCAGCGCTCCGGCGAGCGGGAGCAC
AACCAGAAGGCGCTCGCGGAGATGGTGCTGCTCAGCTTCTCGGACGCGGTGGTCACCTCC
GCCGCATCGACGTTTGGGTACGTCGGGCAGGGGCTGGCGGGGCTGAGGCCATGGGTGCTT
ACGAGCCCCGTCGACAAGAAGGCGCCCGACACGCCGTGCCGGCGCGCCGCCACCATGGAG
CCGTGCTTCCATGTGCCGCTCGACTACGATTGTCGGGCGAAAGCGAAAGGTGACGCCGGC
AGGAGGGTGCGCCACATCCGACACTGCGAGGACTTCCCGCAGGGTGTGCAGTTGCTGGAA
TGATCGGACTACTGTTACATTACATTACATCGGCAGTTAATTAGGAAGCCACCAGACACC
AGGTTCTCGTTATAGTATGATTAAATGTGAGGAATAAATACAGCATTCAATCTAAGAGGT
TACTGTAAAAAAAAAAACAGTTAAGTCAGCTGACCCACGCAAATAGCGTGGGAAGCTAAA
TTTTTCTACTATAACATATGTGATTTTTTTTATTAAAAATACATTTTGTCAATAGTTTTC
TTTCTTTGTTTCATTATATTGGTTCTTACAACATGGGTTTCTATTATACTTATAGGCACA
AACTTTGTATAGCTGTTGTAGATTAAGAGTTCAAGACCTTG