Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12248
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:46573968:46576857:-1 gene:SORBI_3006G095700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCTGTCCACGGCGAACACGAACGCCGCCGAGTCCCATCTGCACTGCTCCACCTTC
GCGTCGCGCTACGTGCGCACCGCGCTCCCGAGGTTCAAGATGCCGGAGCAGTCGATCCCC
AAGGAGGCGGCGTACCAGATCATCAACGACGAGCTGATGCTGGACGGGAACCCGCGGCTG
AACCTGGCGTCGTTCGTGACCACGTGGATGGAGCCCGAGTGCGACAAGCTCATCCAGTCC
TCCATCAACAAGAACTACGTCGACATGGACGAGTACCCCGTCACCACCGAGCTCCAGAAC
CGGTGCGTCAACATGATCGCGCACCTCTTCAACGCCCCGATCGGCGACGACGAGACGGCC
GTCGGCGTCGGCACGGTGGGTTCCTCGGAGGCCATCATGCTGGCCGGGCTGGCGTTCAAG
AGGAAGTGGCAGAACAAGATGAAGGCGGCGGGCAAGCCCTACGACAAGCCCAACATCGTC
ACCGGCGCCAACGTGCAGGTGTGCTGGGAGAAGTTCGCCAGGTACTTCGAGGTGGAGCTC
AAGGAGGTGAAGCTGCGGGAAGGGTACTACGTGATGGACCCGGAGAAGGCCGCGGAGATG
GTGGACGAGAACACCATCTGCGTCGCCGCCATCCTCGGCTCCACGCTCAACGGCGAGTTC
GAGGACGTCAAGATGCTCAACGACCTGCTCGCGGCCAAGAACGCCGAGACGGGGTGGGAC
ACCCCGATCCACGTGGACGCGGCGAGCGGCGGCTTCATCGCGCCCTTCATCTACCCGGAG
CTGGAGTGGGACTTCCGGCTGCCGCTGGTGAAGAGCATCAACGTCAGCGGCCACAAGTAC
GGCCTCGTCTACGCCGGCGTCGGCTGGGTCATCTGGAGGAGCAAGGATGACCTCCCCGAC
GAGCTCATCTTCCACATCAACTACCTCGGCGCCGACCAGCCAACCTTCACGCTCAACTTC
TCCAAAGGTTCGAGCCAGATTATCGCGCAGTATTACCAGCTCATCCGCCTCGGATTCGAG
GGGTACAAGGACGTGATGCAGAACTGCCGCGACAACGCGACGGTGCTCCGCGAGGGCATC
GAGAAGATGGGCTACTTCGACGTGGTGTCCAAGGACTCGGGGGTGCCGCTGGTGGCCTTC
TCCCTCAAGGACTCCTCCAAGTACACGGTGTTCGAGGTGGCCGAGAGCCTCCGGCGGTTC
GGCTGGATCGTGCCGGCCTACACCATGCCCGCCGACGCCGAGCACGTGGCCGTGATGCGC
GTCGTCATCCGCGAGGACTTCAGCCGGGGCCTCGCCGAGCGCCTCATCGCCGACCTGGGC
AAGACCATGGCGGACATGGACGCGCACGCCGGCAAGAAGGCGCCGGACCACCCCAAGAAG
TCGGTGCACGACATCGAGAAGGAGGTCACCACCTTCTGGCGGAGGCTGGTCGCCAACAAT
AAGAAGAAGAGCAGCATGGTGTGCTGA

Peptide Sequence

PEP ID

EES12248
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:46573968:46576857:-1 gene:SORBI_3006G095700 transcript:EES12248 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALSTANTNAAESHLHCSTFASRYVRTALPRFKMPEQSIPKEAAYQIINDELMLDGNPRL
NLASFVTTWMEPECDKLIQSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIGDDETA
VGVGTVGSSEAIMLAGLAFKRKWQNKMKAAGKPYDKPNIVTGANVQVCWEKFARYFEVEL
KEVKLREGYYVMDPEKAAEMVDENTICVAAILGSTLNGEFEDVKMLNDLLAAKNAETGWD
TPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKDDLPD
ELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKDVMQNCRDNATVLREGI
EKMGYFDVVSKDSGVPLVAFSLKDSSKYTVFEVAESLRRFGWIVPAYTMPADAEHVAVMR
VVIREDFSRGLAERLIADLGKTMADMDAHAGKKAPDHPKKSVHDIEKEVTTFWRRLVANN
KKKSSMVC

Transcript Sequence

Transcript ID

EES12248
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:46573968:46576857:-1 gene:SORBI_3006G095700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTTAAAATTTTTCATCATATTAAATCTTGTGCCACATGTACAAAACATTAAATATAAA
CAAAAATAAAACTAATTGCACAATTTAATGTGTAAAATTACGAGATGGATCTTTTAAACT
TAGTTAGTTTATAAATAGATAATAATTATCAAATAAAAACGAAAATGCTACGACTTCAAA
ACTGAACAATGGCTAGTAGTGTTTCCGAGAATGAACCGTCCACATGATTTTCGACTCAAG
GCCTTGTTTAGTTCCGAAAAGTTTTCGGATTTCGGTACTGTAGCACTTTCGTTTGTTTGT
GACAAATATTATTCAATTATGGACTAACTAGGATCAAAAGATTCATCTCGTGATTTACAG
CTAAACTGTGTAATTAGTTTTTATTTTTGTCTATATTTAATGTTTCATGCATGTGCCACA
AGATTCGATGTGACGGAAAATCTTGAAAACTTTTTGGTTTTCAGGGTGAACTAAACGAGC
CCAAGTTGTAGTGCAAAGAATTGCGATAAGCAGATCGAGGCGTGACAGACACAACACACC
CGAGTTCAGTGCCGAAAGCCATGCGCCCGGTCCGAACTCCGACGTACGAGCGGGGCGCGC
ACGCCCATTGTTCTCGGCAAGAACCACGGCGCCCCGACCACGTCGCGCCCATGCGCGTCG
TCCTCCTTACAAAAACCATCGTCACCGCTCTGCCCCCCATCCTCTGATCTGCTCCTCTCA
TCTCGGACAAGGCAAATTTAACTAGCTCTTTACAGAGCAACGGCGAAGCCAGAGATCCGC
CGCCGTTGAACCCCCAAGCGAGATCGAGGACGTACGAAAATGGCGCTGTCCACGGCGAAC
ACGAACGCCGCCGAGTCCCATCTGCACTGCTCCACCTTCGCGTCGCGCTACGTGCGCACC
GCGCTCCCGAGGTTCAAGATGCCGGAGCAGTCGATCCCCAAGGAGGCGGCGTACCAGATC
ATCAACGACGAGCTGATGCTGGACGGGAACCCGCGGCTGAACCTGGCGTCGTTCGTGACC
ACGTGGATGGAGCCCGAGTGCGACAAGCTCATCCAGTCCTCCATCAACAAGAACTACGTC
GACATGGACGAGTACCCCGTCACCACCGAGCTCCAGAACCGGTGCGTCAACATGATCGCG
CACCTCTTCAACGCCCCGATCGGCGACGACGAGACGGCCGTCGGCGTCGGCACGGTGGGT
TCCTCGGAGGCCATCATGCTGGCCGGGCTGGCGTTCAAGAGGAAGTGGCAGAACAAGATG
AAGGCGGCGGGCAAGCCCTACGACAAGCCCAACATCGTCACCGGCGCCAACGTGCAGGTG
TGCTGGGAGAAGTTCGCCAGGTACTTCGAGGTGGAGCTCAAGGAGGTGAAGCTGCGGGAA
GGGTACTACGTGATGGACCCGGAGAAGGCCGCGGAGATGGTGGACGAGAACACCATCTGC
GTCGCCGCCATCCTCGGCTCCACGCTCAACGGCGAGTTCGAGGACGTCAAGATGCTCAAC
GACCTGCTCGCGGCCAAGAACGCCGAGACGGGGTGGGACACCCCGATCCACGTGGACGCG
GCGAGCGGCGGCTTCATCGCGCCCTTCATCTACCCGGAGCTGGAGTGGGACTTCCGGCTG
CCGCTGGTGAAGAGCATCAACGTCAGCGGCCACAAGTACGGCCTCGTCTACGCCGGCGTC
GGCTGGGTCATCTGGAGGAGCAAGGATGACCTCCCCGACGAGCTCATCTTCCACATCAAC
TACCTCGGCGCCGACCAGCCAACCTTCACGCTCAACTTCTCCAAAGGTTCGAGCCAGATT
ATCGCGCAGTATTACCAGCTCATCCGCCTCGGATTCGAGGGGTACAAGGACGTGATGCAG
AACTGCCGCGACAACGCGACGGTGCTCCGCGAGGGCATCGAGAAGATGGGCTACTTCGAC
GTGGTGTCCAAGGACTCGGGGGTGCCGCTGGTGGCCTTCTCCCTCAAGGACTCCTCCAAG
TACACGGTGTTCGAGGTGGCCGAGAGCCTCCGGCGGTTCGGCTGGATCGTGCCGGCCTAC
ACCATGCCCGCCGACGCCGAGCACGTGGCCGTGATGCGCGTCGTCATCCGCGAGGACTTC
AGCCGGGGCCTCGCCGAGCGCCTCATCGCCGACCTGGGCAAGACCATGGCGGACATGGAC
GCGCACGCCGGCAAGAAGGCGCCGGACCACCCCAAGAAGTCGGTGCACGACATCGAGAAG
GAGGTCACCACCTTCTGGCGGAGGCTGGTCGCCAACAATAAGAAGAAGAGCAGCATGGTG
TGCTGATGGCCGCTGCGTGCGGAGGAATAACGAAACATTCTTTGATTCGAGATCGATGTT
TCACATCATCACGAACTCAGTTCTTCTTATGGCTTCTCTCTTTTTTTTTGGTTTACGTCT
GCGTATGTGTGATTCGATTTGAGCTCCCATTTTGTCTGTTTCGATTTGTGCGCGGTTGTT
CGCGCCAATTGACGAGAGAACTTGTTAACTCGAAGGATGTAGGCATATATATATATATAT
ACATTTCGAGATGAAGTACAGTAATGAACTTGGGCTT