Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12225
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:46082163:46084227:-1 gene:SORBI_3006G090900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGAGCTCTGCATTGTCGAATCAAGCTGCGTTGGCAGCACGATCAAGGACGATGCCA
TCGCCATCATCATCGCAGGTTCTGGTGCTTCTCGCCGTCGCTGTCTCCCTCCTTTCCGGC
TCCAGCTATGTCGCTGCCGGCGGACACCCCGATTACGCCGACGCGCTCGCGAAGGCGATA
CTCTTCTTCCAGGGGCAGCGGTCCGGCCAGCTGCCGCCGGACCAGGCCGTCACGTGGCGC
TCCAACTCCGGCCTCTCCGACGGCTCGGCCGCAAACGTCGATCTCACCGGCGGCTACTAC
GACGGCGGCGACAACGCCAAGTTCGGCTTCCCGATGGCCTTCACGACGACGATGCTATCG
TGGAGCGTCCTGGAGCACGGCGGGAAGATGAAGGCGGCGCGCGTAGTGCACGACGCGCGC
GCCGCCGTGCGGTGGGGCGCGGACTACCTCCTCAAGGCGGCCACGCAGACGCCGGGCACG
CTCTACGTCGGCGTGGGCGACCCGGACGCGGACCACCGGTGCTGGGAGCGGCCCGAGGAC
ATGGACACGCCGAGGACCGTGTACGCAGTGTCCGCGTCGGCGCCCGGGTCCGACGTCGCC
GGCGAGACGGCGGCCGCGCTCGCCGCGGCCAGCTTGGTGTTCCGGGCCGCCGACCGGGCC
TACTCCAGGAGGCTGCTCGCCGCGGCGCGGGCCGTGATGGAGCTCGCCGTGCTGCACCAG
GGAAAGTACAGCGACTTCGTCGGCGGCAACATCGGCGCCTACTACCAGTCGTACTCCGGC
TACAAGGACGAGCTCCTGTGGGGGTCGGCGTGGCTGCTCTGGGCGACCAAGAACTCCTCC
TACCTCGGCTACCTCTACTCCTTGGGGGACATCGACAGAAGCGTCGACATGTTCAGCTGG
GACAACAAGCTCGCCGGAGCTCGCGTGCTACTGTCACGGAGAGCTCTGGTGAACGGGGAC
AAGAGGCTGGAGCCGTTCAGGCAGCAGGCGGAGGACTTCTTCTGCCGGATCCTGCGCGAC
TCCCCATCCTCCACGACGCAGTACACGGCCGGCGGCCTGATGCACAAGTCCGGGAACGCC
AACCTGCAGTACGTGACCTCGGCGAGCTTCCTGCTGACCACCTACGCCAAGTACATGGCC
GTCACGAAGCACGCCTTCGCCTGCGGGAGCCTCTCCGTCACGGCCAGGTCGCTCAGGGCT
CTCGCCAAGCAGCAGGTGGACTACATCCTGGGTGCCAACGCCAAGGGCATGTCGTACATG
GTGAACTTCGGCGCGCGGTGGCCGCAGAGGATCCACCACCGGGCGTCGTCGCTGCCGCCG
GTGGCCGCCCACCCGGCCCACATCGGGTGCCAGGAGGGGTTCCAGAGCTACTTCTACGCC
AGCGCCGCCAACCCGAACGTGCACACGGGCGCCGTCGTCGGCGGGCCCGACGAGCACGAG
GAGTTCCCCGACGACCGCGCCGACTACGCGCGGTCCGAGCCGACGACGTACACCAACGCG
CCCCTCGTCGGCTGCCTCGCCTACCTCGCCGGCACGTACAGGAGCTAG

Peptide Sequence

PEP ID

EES12225
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:46082163:46084227:-1 gene:SORBI_3006G090900 transcript:EES12225 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMSSALSNQAALAARSRTMPSPSSSQVLVLLAVAVSLLSGSSYVAAGGHPDYADALAKAI
LFFQGQRSGQLPPDQAVTWRSNSGLSDGSAANVDLTGGYYDGGDNAKFGFPMAFTTTMLS
WSVLEHGGKMKAARVVHDARAAVRWGADYLLKAATQTPGTLYVGVGDPDADHRCWERPED
MDTPRTVYAVSASAPGSDVAGETAAALAAASLVFRAADRAYSRRLLAAARAVMELAVLHQ
GKYSDFVGGNIGAYYQSYSGYKDELLWGSAWLLWATKNSSYLGYLYSLGDIDRSVDMFSW
DNKLAGARVLLSRRALVNGDKRLEPFRQQAEDFFCRILRDSPSSTTQYTAGGLMHKSGNA
NLQYVTSASFLLTTYAKYMAVTKHAFACGSLSVTARSLRALAKQQVDYILGANAKGMSYM
VNFGARWPQRIHHRASSLPPVAAHPAHIGCQEGFQSYFYASAANPNVHTGAVVGGPDEHE
EFPDDRADYARSEPTTYTNAPLVGCLAYLAGTYRS

Transcript Sequence

Transcript ID

EES12225
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:46082163:46084227:-1 gene:SORBI_3006G090900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCGTCGCAGTGCAGTAGTGCACTATATCGTACGCGGTGGAGAAGATGATGAGCTCTGCA
TTGTCGAATCAAGCTGCGTTGGCAGCACGATCAAGGACGATGCCATCGCCATCATCATCG
CAGGTTCTGGTGCTTCTCGCCGTCGCTGTCTCCCTCCTTTCCGGCTCCAGCTATGTCGCT
GCCGGCGGACACCCCGATTACGCCGACGCGCTCGCGAAGGCGATACTCTTCTTCCAGGGG
CAGCGGTCCGGCCAGCTGCCGCCGGACCAGGCCGTCACGTGGCGCTCCAACTCCGGCCTC
TCCGACGGCTCGGCCGCAAACGTCGATCTCACCGGCGGCTACTACGACGGCGGCGACAAC
GCCAAGTTCGGCTTCCCGATGGCCTTCACGACGACGATGCTATCGTGGAGCGTCCTGGAG
CACGGCGGGAAGATGAAGGCGGCGCGCGTAGTGCACGACGCGCGCGCCGCCGTGCGGTGG
GGCGCGGACTACCTCCTCAAGGCGGCCACGCAGACGCCGGGCACGCTCTACGTCGGCGTG
GGCGACCCGGACGCGGACCACCGGTGCTGGGAGCGGCCCGAGGACATGGACACGCCGAGG
ACCGTGTACGCAGTGTCCGCGTCGGCGCCCGGGTCCGACGTCGCCGGCGAGACGGCGGCC
GCGCTCGCCGCGGCCAGCTTGGTGTTCCGGGCCGCCGACCGGGCCTACTCCAGGAGGCTG
CTCGCCGCGGCGCGGGCCGTGATGGAGCTCGCCGTGCTGCACCAGGGAAAGTACAGCGAC
TTCGTCGGCGGCAACATCGGCGCCTACTACCAGTCGTACTCCGGCTACAAGGACGAGCTC
CTGTGGGGGTCGGCGTGGCTGCTCTGGGCGACCAAGAACTCCTCCTACCTCGGCTACCTC
TACTCCTTGGGGGACATCGACAGAAGCGTCGACATGTTCAGCTGGGACAACAAGCTCGCC
GGAGCTCGCGTGCTACTGTCACGGAGAGCTCTGGTGAACGGGGACAAGAGGCTGGAGCCG
TTCAGGCAGCAGGCGGAGGACTTCTTCTGCCGGATCCTGCGCGACTCCCCATCCTCCACG
ACGCAGTACACGGCCGGCGGCCTGATGCACAAGTCCGGGAACGCCAACCTGCAGTACGTG
ACCTCGGCGAGCTTCCTGCTGACCACCTACGCCAAGTACATGGCCGTCACGAAGCACGCC
TTCGCCTGCGGGAGCCTCTCCGTCACGGCCAGGTCGCTCAGGGCTCTCGCCAAGCAGCAG
GTGGACTACATCCTGGGTGCCAACGCCAAGGGCATGTCGTACATGGTGAACTTCGGCGCG
CGGTGGCCGCAGAGGATCCACCACCGGGCGTCGTCGCTGCCGCCGGTGGCCGCCCACCCG
GCCCACATCGGGTGCCAGGAGGGGTTCCAGAGCTACTTCTACGCCAGCGCCGCCAACCCG
AACGTGCACACGGGCGCCGTCGTCGGCGGGCCCGACGAGCACGAGGAGTTCCCCGACGAC
CGCGCCGACTACGCGCGGTCCGAGCCGACGACGTACACCAACGCGCCCCTCGTCGGCTGC
CTCGCCTACCTCGCCGGCACGTACAGGAGCTAGCGCGTATCACTCTGACCACGAGTCCAC
GATGATGATGACCGTTGAATCATGTAATGGCGTAGAAATGGGAACGAAGTACCGTGCACA
ACAATTCTTTGTTGGGATGAACTCGTGAACCCATTATATTCTCTTACAAAGCTAAACCCT
TCCCACTA