Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES12087
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:42356353:42360654:-1 gene:SORBI_3006G064100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGGACGTAGAACTGTTCTATAAGGACACTAGCGATCACAGCATCAGCTCTGAGGAA
GAAGATATGCTTATCAGGAGTTGTAGCAATCTCAATGTGAGTTTTGGATACCATTGTGAT
TCTTCTCAGAGCTTTTCTCCTGAAAATGATCATGGGAATGGCATTTCTCCTAAGAACATA
TTTGGGACTAATACCATGATCGGGTCACGAAATGGCTCATTTACTTGTTTATCTGGTGCT
GCTATTAGTGCAAATTTTACACTGGCAAACACAAATATTTGCAATGGTCTTATTGGTGAA
GAAATTTTACCAGAACTAGATTCTCCAAACTCCTTCAGAAAAATCGTTTCTTCTCCATCA
ATGTCAAGATTGGACTCATACTCCACCTCACAAGGCAGCCCTGTGTCAACTGAGAGCTCT
ATATTTGAGATCAGTAAAAATCTTTGGAGGTCCAGTGCCCCAACAACTGTATCATCCAAT
TTTCTGACTAATACAGAGGTGAAAATGGCTGGCGGAGCTGCTGGAGAGGATAGAGTCCAA
GCTGTGTGCTCAGAGAAAAATGGATGGCTGATTTGTGGAATATATGATGGGTTTAATGGG
AGGGATGCAGCTGATTTTCTCGCGGTAACTCTGTATGATAACATAGTATATTACTTGTAC
CTGCTGGAGAATCGGATAAAGCAACAAAATGGTTTATACAATTCATCAGAAACCTCTCTC
AATGGCCTTAAAAGCGAGTTAACACTAGCCATGAGAAATTCAGAAAATGAAGACATAAAA
TTTTCTGAAACATTTCGAGCTGGTGTGCTGAATTGCCTTTCTACTGCTGTTGAGCAAGCT
GAGAATGACTTTTTATGCATGGTTGAACAAGAGATGGATGATAGGCCAGATTTAGTTTCA
GTAGGGTCTTGTGTTCTGGTTGTTCTTCTTCATGGAACAGATCTGTGCATCTTAAATTTG
GGGGACAGTAGAGCTGTGCTTGCTTCCATGCCATATGTACAAAATGGTGCTTTGAAGGCT
ACTCAGCTGACAGAGACCCACTCGCTTGAAAATCCTTTGGAGTACCAAAGACTTTTAGCT
GACCATCCCGACGATTCTTCAGTTGTCAGGGGTAACAAAATAAAAGGAAAGTTGAAGGTT
ACTCGTGCTTTTGGAGTTGGCTATCTAAAGCAGAGGAAGTTCAATGATGCACTGATGGGC
ATTCTACGAGTCCGCGATTTGAGCAGCCCTCCATATGTTTACACAAATCCACACACATTG
AGTCACAAAGTTACAGATGATGACTTGTTTGTTGTGCTCGGTAGTGATGGCTTATTTGAT
TTCTTCAGTAATGATGAAGTTGTTTGGTTGGTTTATCAATTTATGCGTGATAATCCAATG
GGGGATCCTGCAAAATATCTCATTGAGCAACTTATACTCAAAGCAGCCAAGGAAGCAGCT
TTAACAGCCGAAGAATTGATGAGGATACCTGTTGGGAGTAGGAGGAAGTACCATGATGAT
GTGACCGTCATTGTTATCATCCTTGGAAATGCACAGAGGACGATGACTGCATCAACTTCC
TTGTGA

Peptide Sequence

PEP ID

EES12087
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:42356353:42360654:-1 gene:SORBI_3006G064100 transcript:EES12087 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVDVELFYKDTSDHSISSEEEDMLIRSCSNLNVSFGYHCDSSQSFSPENDHGNGISPKNI
FGTNTMIGSRNGSFTCLSGAAISANFTLANTNICNGLIGEEILPELDSPNSFRKIVSSPS
MSRLDSYSTSQGSPVSTESSIFEISKNLWRSSAPTTVSSNFLTNTEVKMAGGAAGEDRVQ
AVCSEKNGWLICGIYDGFNGRDAADFLAVTLYDNIVYYLYLLENRIKQQNGLYNSSETSL
NGLKSELTLAMRNSENEDIKFSETFRAGVLNCLSTAVEQAENDFLCMVEQEMDDRPDLVS
VGSCVLVVLLHGTDLCILNLGDSRAVLASMPYVQNGALKATQLTETHSLENPLEYQRLLA
DHPDDSSVVRGNKIKGKLKVTRAFGVGYLKQRKFNDALMGILRVRDLSSPPYVYTNPHTL
SHKVTDDDLFVVLGSDGLFDFFSNDEVVWLVYQFMRDNPMGDPAKYLIEQLILKAAKEAA
LTAEELMRIPVGSRRKYHDDVTVIVIILGNAQRTMTASTSL

Transcript Sequence

Transcript ID

EES12087
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:42356353:42360654:-1 gene:SORBI_3006G064100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGGGAGAAGCACAAGCAAGCAGTGTCATTATCGTGGTGGCTAGTGACATGGTTAGATT
TGGTATATCCAATCAGATCACAGGCAGGAAGCAGTCAGATCTCACTCACCCCTCAAAAAA
AAAAATCAAAAACAAAAACAAAGAAAAACCCGGTGAATCTCCCGAATCTGTTGCTTCCCT
CTCTCTCCGTCGCCCACCACCACCAGGCCAGCACAATATATTCCCCGCTGCGGCCGCAGA
CCACACCTTCCACCAAATTTCCGTCCCCCCATATCCACCGCACCACACCACGGCTGTCCC
TTCCTCTCCTGGTTCTCCAGTCTCCACTCCTCCGCCTCAACAGCGCTCGGCTATTCCCGG
ATTGCGGCTTGGGGTTGGTCTGGTGATTGGCGGAGGTGAGCGTGCGAATCGTCGTCCCCT
CTCCTACCTCGGTCCGCGTTCTGTAGATTAGATGCGTATGTAGTTGCACACGCAACTGCA
ACTGCAACTGTGATCTCACTCCACTTGCGCGGTATGTACGCTGAATTCTTGATTCGTGTT
CTGTTCTGCTGCGATAGGAGGGACTTTTCAAGAACGGGCGGCGCGGCGGCGGCGGCGGCG
CTTTTTTCCTGACGCAAACAAATTGCCCCGGTCTCCTGCCTTCTTGCTGGCGCGCTTGGG
GCCGTGGTTGGGCTCAGGAATGGGGGGAGGAGAGCAGGGGCTGCGTCGCCTGGCCCGGTT
CCCATCTCTCTGAACTTAGATGGATGCATCGGTACGTCTCTGTGCCTCTCGTCGCTTTTG
CCTGTCTGCCTGATCGTCGTTCTTCTTCTCATGTGTGTTTGTTTGTTCCGTTCTCTTTGT
GCTGTGCTGCTGCGTAGGTGAACGCCAAGAAGAAGGTTAGTTTCTGTGGGAACACTGGCC
ACAGCCGCTGCGGTGAAGTTCATTTAGCTGCCGCCGTGTGCTCCGGTCGTATGCGAAGCA
ACCCCTTCTCACTTCAGGTTATTGTGTTCTCTCTGTTCCCCCTACATATGTCTTGCTCAA
GAGTACATCTCTCTACGCTCTGACTCCGAACGATGTTGTTTTTGATTGGGAGGCTATCAT
TTTCCTTCTTTTCTCCAGTTGTATTTGGATCTTGTAGTATTCATATTTCTTCGCAAACTG
TGTCCGGTGGGTCATATCTGCTTGCTTAGCAGCAAGTACTGCCGAGTTTAGAACTGGTGT
ATCCACTTTTTGATAACAACTAAGAGGGTAGTAGGTTTGTACAATTCAAGGTGGAGGAGG
CTGTGATCATCACAATGTCCATGGCGTTTGATTTCTCATATAAAAGTTTGTGGTGCAGGA
ACATGCGAATATTTTACAACCTGGACAAGTCAAACTTGAGTTTTCTTATTTTGTTCATGG
CGATTGGCACCTCATATGTAATTTCCACCCTCTTAAATCCAGGCGGAAAAATAGTCAGAC
AAACGCACATTCTCTGTCCTATTGACTTGGTCCAAACCTAAATTTGCACTCTTTTAGGGA
TGGAGGTAGTACCATGTTAGCAGGAAGGAAGGCTTCACTATCTAGATTAAGGGAGCCTAA
CTTCTGGCCTCTGCACTGGCTACGGATGCACATGACCACTAAACTTACAAGTATCACACC
TGGATTTGAACCTTGTGGACTGTCAAATATATTTATATATTAAAACAAAGGATCAATTGC
ACTGCAATCACAACCGTACTATCAGCAGAACTAGAGAAGCAGCCCTCTGCCTTGTTGAGA
TGCCATCCTATGCAATTCTTGTGCACAGATCTACAGATTTAGTAGGCTGGAACATATTAA
TTTACAATCACCTTGCTATTAGCTTATCAAATAGTACATGACCTTTTTTTTTGTTCTTTT
ACAGCGGTTTTAACACTAAAGCAATGATGTGAGTATTGCAGGTTTGGTTTGCATTTCCGT
TCAAGTATAAAGGAAGCAGTATTTGGCATGGCATTTGAATAGCATTGGAACCTATAGAAA
AAAAGTGTTCCAGCAGTATTACGTTACACTGGTGTTGTACTGTTAAAAAACATGGTGGAC
GTAGAACTGTTCTATAAGGACACTAGCGATCACAGCATCAGCTCTGAGGAAGAAGATATG
CTTATCAGGAGTTGTAGCAATCTCAATGTGAGTTTTGGATACCATTGTGATTCTTCTCAG
AGCTTTTCTCCTGAAAATGATCATGGGAATGGCATTTCTCCTAAGAACATATTTGGGACT
AATACCATGATCGGGTCACGAAATGGCTCATTTACTTGTTTATCTGGTGCTGCTATTAGT
GCAAATTTTACACTGGCAAACACAAATATTTGCAATGGTCTTATTGGTGAAGAAATTTTA
CCAGAACTAGATTCTCCAAACTCCTTCAGAAAAATCGTTTCTTCTCCATCAATGTCAAGA
TTGGACTCATACTCCACCTCACAAGGCAGCCCTGTGTCAACTGAGAGCTCTATATTTGAG
ATCAGTAAAAATCTTTGGAGGTCCAGTGCCCCAACAACTGTATCATCCAATTTTCTGACT
AATACAGAGGTGAAAATGGCTGGCGGAGCTGCTGGAGAGGATAGAGTCCAAGCTGTGTGC
TCAGAGAAAAATGGATGGCTGATTTGTGGAATATATGATGGGTTTAATGGGAGGGATGCA
GCTGATTTTCTCGCGGTAACTCTGTATGATAACATAGTATATTACTTGTACCTGCTGGAG
AATCGGATAAAGCAACAAAATGGTTTATACAATTCATCAGAAACCTCTCTCAATGGCCTT
AAAAGCGAGTTAACACTAGCCATGAGAAATTCAGAAAATGAAGACATAAAATTTTCTGAA
ACATTTCGAGCTGGTGTGCTGAATTGCCTTTCTACTGCTGTTGAGCAAGCTGAGAATGAC
TTTTTATGCATGGTTGAACAAGAGATGGATGATAGGCCAGATTTAGTTTCAGTAGGGTCT
TGTGTTCTGGTTGTTCTTCTTCATGGAACAGATCTGTGCATCTTAAATTTGGGGGACAGT
AGAGCTGTGCTTGCTTCCATGCCATATGTACAAAATGGTGCTTTGAAGGCTACTCAGCTG
ACAGAGACCCACTCGCTTGAAAATCCTTTGGAGTACCAAAGACTTTTAGCTGACCATCCC
GACGATTCTTCAGTTGTCAGGGGTAACAAAATAAAAGGAAAGTTGAAGGTTACTCGTGCT
TTTGGAGTTGGCTATCTAAAGCAGAGGAAGTTCAATGATGCACTGATGGGCATTCTACGA
GTCCGCGATTTGAGCAGCCCTCCATATGTTTACACAAATCCACACACATTGAGTCACAAA
GTTACAGATGATGACTTGTTTGTTGTGCTCGGTAGTGATGGCTTATTTGATTTCTTCAGT
AATGATGAAGTTGTTTGGTTGGTTTATCAATTTATGCGTGATAATCCAATGGGGGATCCT
GCAAAATATCTCATTGAGCAACTTATACTCAAAGCAGCCAAGGAAGCAGCTTTAACAGCC
GAAGAATTGATGAGGATACCTGTTGGGAGTAGGAGGAAGTACCATGATGATGTGACCGTC
ATTGTTATCATCCTTGGAAATGCACAGAGGACGATGACTGCATCAACTTCCTTGTGAAAG
AATGGAGAGATAGAGAGACGGGCTATCAGCTGGTAAATTTTTGTGGGTGTTTGCATATGT
GCCTGTTTCAAATTACAAGGTTTTTTTTTTGTTGAGAATGGTGTGGTAGTCAACAAACCA
AATAAAAATGTACATATTGTTTTGAAACAAAACCTTGTGTTCAATCACAAGGTGCACATG
GATTTGTTTGACCTACTTTTGTACATGGATCAAACATGGAGGCTCGTACTTGAGCTAATG
AGTCCATGAGCAGAGTGGTAGATCGTTTCAGTTTCTGATTGCCAATCTTTCTCTGCTAAG
TATTTATTTTTTGTGTTAATCGTAAATTTATGACTCATGGTGTCAACTTGCT