Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11971
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:30770150:30772258:-1 gene:SORBI_3006G044100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCAAGTAGTTTTTGATCAGCTCGCCTGCGACTCACCGACGGCAAAAGTTTTTCTC
CTTGTGCTCCTCCCTCTCCTACTACTCTTCGTGCTGCTGCGCTGCTTCTTCACCACGGGG
GCAGCGAGGAGTAGTCGAGGCAGAAAGAGCCTGCCTCCCTCCCCTCCTGCGCTGCCTCTG
ATCGGGCATGTCCACCTCGTCGGTGCGCTCCCGCACGTCTCGCTGCGGGCCCTCGTCGAG
CGGCATGGTGTCGATGGCCTCCTGATGCTCCGCCTAGGTGTGGTCCCAACTCTGGTGGCC
TCCTCCGCGCGCGCTGCGCAGGCTGTCTTGCGCACGCACGATCAGGTGTTCTCCTCCCGG
CCGCGGTCCGTGTGTGGGGACGTGCTTCTGTACGGGCCGTCGGACATCGCCATGGCACCC
TACGGCGAGCAGTGGCGTTTGGCGAAGAAGCTGTCCACCACGCACCTGCTTAGCGCCAAG
AAGGTTCAGTCCTACCGCACTGCCCGTAAGGAAGAGGTGGAGCTAGTAATCAACAAGATC
ATCCATGGTGCGGCAGCAACACGCACGGTGGTGGACATGAGCGAGCTGCTGAGCAAGTTC
ACCAATGACATAGTGTGCCGCGCCGTGGCAGGCCGGTCCTTCAGGGTGGAGGGCCGGGAC
AGGGTGTTCCGAGAGCTGATCGACGAAGGCGCGGCCCTCGTGACCGGATTCAACCTGGAG
AACTTCTACCCTGCCCTCGCCAAGGCCGCGGGAGGCGTTCTCGTCTCGCCGGCGCGTCGC
AAGGCTGAAAAGTTAAGGGATACGTGGGACATGCTTCTCGACAAGCTGATCGACGAGCAC
GCGAGCGAGATAGCTGCTGCTGCAACGCGTGTTGAGGATGCTGGTGGTAGCGACCACGAG
GAGTATGACTTCATACATGTGTTGCTGTCCGTGCAGCACGAGTATGGGCTCACCAGAGAA
AGCATCAAGGGTATCTTGGAGGACATGTTTGCAGCAGGCACGGACACAACGTACCTCATC
CTAGAATTTGCCATGGCTGAGCTCATGCTACACCAAGATATTATGGCCAAGCTACAGGAT
GAGGTTAGGAGCACTAGACTCTGCCAAGAAGCCATCAGTGAGGACAGTCTCTCCAGAATG
ACTTATCTGAAAGCTGTAATCAAAGAAACGCTTCGTTTGCACCCACCGGCTCCGCTCCTC
ATCCCGCATCTCTCGTTAGAGGATTGTGATGTCGTTGACAACTTCAAAGTTCCTGCTGGC
ACGACTGTGCTCGTTAATGTCTGGGCAATCGGCCGGGACCCTCGGACGTGGGATAATGCG
GAGGAGTTCATGCCAGAGAGATTCATCCATGATGGAGAAATCGGGGGAGTCGATTTTAAA
GGGAAGGACTTCCAGTATCTGCCTTTTGGGTCAGGGAGAAGGATGTGTCCAGGGATGAAC
TTTGCATTAGCCACCATTGAGATCATGCTGGCAAATCTTGTGTACCACTTTGATTGGGAG
CTGCCTAAAGGAGCAGAGAAGATCGACATGAGTGAAGTGTTCGGGTTGACAGCGAGGCGG
AAAGAGAAGCTTCTCCTTGTCCCTATCGCACGTGGTACGGTGTGCCCATCAAATGGGTAG

Peptide Sequence

PEP ID

EES11971
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:30770150:30772258:-1 gene:SORBI_3006G044100 transcript:EES11971 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAQVVFDQLACDSPTAKVFLLVLLPLLLLFVLLRCFFTTGAARSSRGRKSLPPSPPALPL
IGHVHLVGALPHVSLRALVERHGVDGLLMLRLGVVPTLVASSARAAQAVLRTHDQVFSSR
PRSVCGDVLLYGPSDIAMAPYGEQWRLAKKLSTTHLLSAKKVQSYRTARKEEVELVINKI
IHGAAATRTVVDMSELLSKFTNDIVCRAVAGRSFRVEGRDRVFRELIDEGAALVTGFNLE
NFYPALAKAAGGVLVSPARRKAEKLRDTWDMLLDKLIDEHASEIAAAATRVEDAGGSDHE
EYDFIHVLLSVQHEYGLTRESIKGILEDMFAAGTDTTYLILEFAMAELMLHQDIMAKLQD
EVRSTRLCQEAISEDSLSRMTYLKAVIKETLRLHPPAPLLIPHLSLEDCDVVDNFKVPAG
TTVLVNVWAIGRDPRTWDNAEEFMPERFIHDGEIGGVDFKGKDFQYLPFGSGRRMCPGMN
FALATIEIMLANLVYHFDWELPKGAEKIDMSEVFGLTARRKEKLLLVPIARGTVCPSNG

Transcript Sequence

Transcript ID

EES11971
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:30770150:30772258:-1 gene:SORBI_3006G044100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATATGTCCACAGCTAGCAAAAATACATTTCTACTTTAGTACAAGTCCCGCATGGCTCAAG
TAGTTTTTGATCAGCTCGCCTGCGACTCACCGACGGCAAAAGTTTTTCTCCTTGTGCTCC
TCCCTCTCCTACTACTCTTCGTGCTGCTGCGCTGCTTCTTCACCACGGGGGCAGCGAGGA
GTAGTCGAGGCAGAAAGAGCCTGCCTCCCTCCCCTCCTGCGCTGCCTCTGATCGGGCATG
TCCACCTCGTCGGTGCGCTCCCGCACGTCTCGCTGCGGGCCCTCGTCGAGCGGCATGGTG
TCGATGGCCTCCTGATGCTCCGCCTAGGTGTGGTCCCAACTCTGGTGGCCTCCTCCGCGC
GCGCTGCGCAGGCTGTCTTGCGCACGCACGATCAGGTGTTCTCCTCCCGGCCGCGGTCCG
TGTGTGGGGACGTGCTTCTGTACGGGCCGTCGGACATCGCCATGGCACCCTACGGCGAGC
AGTGGCGTTTGGCGAAGAAGCTGTCCACCACGCACCTGCTTAGCGCCAAGAAGGTTCAGT
CCTACCGCACTGCCCGTAAGGAAGAGGTGGAGCTAGTAATCAACAAGATCATCCATGGTG
CGGCAGCAACACGCACGGTGGTGGACATGAGCGAGCTGCTGAGCAAGTTCACCAATGACA
TAGTGTGCCGCGCCGTGGCAGGCCGGTCCTTCAGGGTGGAGGGCCGGGACAGGGTGTTCC
GAGAGCTGATCGACGAAGGCGCGGCCCTCGTGACCGGATTCAACCTGGAGAACTTCTACC
CTGCCCTCGCCAAGGCCGCGGGAGGCGTTCTCGTCTCGCCGGCGCGTCGCAAGGCTGAAA
AGTTAAGGGATACGTGGGACATGCTTCTCGACAAGCTGATCGACGAGCACGCGAGCGAGA
TAGCTGCTGCTGCAACGCGTGTTGAGGATGCTGGTGGTAGCGACCACGAGGAGTATGACT
TCATACATGTGTTGCTGTCCGTGCAGCACGAGTATGGGCTCACCAGAGAAAGCATCAAGG
GTATCTTGGAGGACATGTTTGCAGCAGGCACGGACACAACGTACCTCATCCTAGAATTTG
CCATGGCTGAGCTCATGCTACACCAAGATATTATGGCCAAGCTACAGGATGAGGTTAGGA
GCACTAGACTCTGCCAAGAAGCCATCAGTGAGGACAGTCTCTCCAGAATGACTTATCTGA
AAGCTGTAATCAAAGAAACGCTTCGTTTGCACCCACCGGCTCCGCTCCTCATCCCGCATC
TCTCGTTAGAGGATTGTGATGTCGTTGACAACTTCAAAGTTCCTGCTGGCACGACTGTGC
TCGTTAATGTCTGGGCAATCGGCCGGGACCCTCGGACGTGGGATAATGCGGAGGAGTTCA
TGCCAGAGAGATTCATCCATGATGGAGAAATCGGGGGAGTCGATTTTAAAGGGAAGGACT
TCCAGTATCTGCCTTTTGGGTCAGGGAGAAGGATGTGTCCAGGGATGAACTTTGCATTAG
CCACCATTGAGATCATGCTGGCAAATCTTGTGTACCACTTTGATTGGGAGCTGCCTAAAG
GAGCAGAGAAGATCGACATGAGTGAAGTGTTCGGGTTGACAGCGAGGCGGAAAGAGAAGC
TTCTCCTTGTCCCTATCGCACGTGGTACGGTGTGCCCATCAAATGGGTAGGAAGAACTTA
CGTTTGAGTTCTGTTCCTTGCAGTGGTGGTTGCTTGATGTGTACCTAAAATGGACCTACT
CGCTTTGTCGTTTTTCTTTGCAATTATGTGTCCGTACATGTTCTGATATCTATATATCAT
ATTAATGCAACATCGACAAGTGATATTGCGTGTTCG