Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11970
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:30398857:30401232:-1 gene:SORBI_3006G043800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCACATCAAGCAACAATAGTTATCGATGATCTCACCACTGCTAATTCACCGCTGCTG
AAAGCAGTTTTCCCACTCCTGGTCCCTGTCATCCTGCTCTTCGTCCTGCTGCGCTACTTC
TCTACAGGAGCAACAACGACTAATACAAAGCAAGGAAAGAAACTGCTTCCTTCACCTCCG
GCCCTGCCGCTGATCGGGCACCTTCACCTCGTCGGTGCGCACCCGCATGTCTCTATGCGG
GGCCTCGCCGCCCGGCACGGTGGCGAGGACCTCATGCTACTCCGCCTCGGCACGGTCCCG
ACGCTTGTGGCGTTCTCCCCGCGCGCCGCACAGGCGGTGCTGCGCACGCACGACCAGTCG
CTGGCGTCGAGGCCCCGCTCCATCTTCGGCGATATCCTCGGTTACGGGCCGTCGGACGTC
GGGTTCGCGCCCTACGGCGAGGGTTGGCGGCAGGCGAAGAAGCTGGTCACCACGCACCTG
CTCAACACCAAGAAGGTGCAGTCCTACCGCGCCGCCCGCGAGGAGGAGGTGGGACTGGTT
GTCGACAAGATCCGCTGCGCAGCCATGGCAGGCGCGGCCGTGGACTTGAGCGAGCTCCTG
AGCTCGTTCACGACGGACATGATCTCCCGAGCCGTGGTGGGGCGGTCGTTCAGGGTGGAC
GGCCTGGACAAGGTGTTCAAGGAAGCGATGGACGCGAGCATGGCCGTCCTTGGGGGCTTC
AACCTGGAGAACTTTTATCCTGGCCTGGCCAAGGTGGCCGGCGGCGTGCTCATGTGGCCG
GGGCGCCGCAAGGCTGAGAGACTCAGGGACCAGTGGGATGAGGTCCTTGATAAGGTGATC
GACCAGCACGCGAGCATGGCAGCAGCAAGCCACGAGAGTGATTTTACCCATGTGATGCTA
TCCGTGCAAGAGGAGTACGGGCTCACCAGAGACGGCATCAAAGGAATCTTGTCTGATATG
TTTGCAGCGGGCACAGACACAGCGTACTTGGTATTAGAATTCACCATGGCTGAGCTGATG
CTGCACCAAGATGTTATGGCAAGGCTACAGGCAGAGGTGAGAAATAGCATTATGCCTAAG
AACCAAGAAGTCATCACAGAAGAGTACCTCACTGGAATGCCATATCTAAAAGCTGTCATC
AAAGAAACACTCCGATTGCACCCGCCATCACCGCTCCTCCTCCCACATCAGTCACTAGAG
GAGTGCACCATCGATGGCTACGTGGTTCCTGCTGGCACCACCGTGTTTGTCAACGCCTGG
GCAATCGGCCGCGACCTGAGGTTATGGGATGCTGCTGAGGAGTTCATGCCAGAAAGGTTC
ATCGACAAGGGGGCCACAGAGGGTGTTGATTTTAGAGGAATTGACTTTCAATTTCTGCCA
TTTGGGTCCGGCCGAAGGATGTGTCCTGGCATGAATTTTGGCCTGGCCAACGTTGAAATC
ATGCTGGCAAATCTTGTGTGCCACTTTGATTGGGAGATGGCGGGAGGAGCCAATGAGATT
GACATGACAGAGGTGTTTGGATTAACTGTGCACCGAAAAGAGAAGCTTATCCTCACTCCA
AGGTTACAATCTTGTGTTGCTTAA

Peptide Sequence

PEP ID

EES11970
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:30398857:30401232:-1 gene:SORBI_3006G043800 transcript:EES11970 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAHQATIVIDDLTTANSPLLKAVFPLLVPVILLFVLLRYFSTGATTTNTKQGKKLLPSPP
ALPLIGHLHLVGAHPHVSMRGLAARHGGEDLMLLRLGTVPTLVAFSPRAAQAVLRTHDQS
LASRPRSIFGDILGYGPSDVGFAPYGEGWRQAKKLVTTHLLNTKKVQSYRAAREEEVGLV
VDKIRCAAMAGAAVDLSELLSSFTTDMISRAVVGRSFRVDGLDKVFKEAMDASMAVLGGF
NLENFYPGLAKVAGGVLMWPGRRKAERLRDQWDEVLDKVIDQHASMAAASHESDFTHVML
SVQEEYGLTRDGIKGILSDMFAAGTDTAYLVLEFTMAELMLHQDVMARLQAEVRNSIMPK
NQEVITEEYLTGMPYLKAVIKETLRLHPPSPLLLPHQSLEECTIDGYVVPAGTTVFVNAW
AIGRDLRLWDAAEEFMPERFIDKGATEGVDFRGIDFQFLPFGSGRRMCPGMNFGLANVEI
MLANLVCHFDWEMAGGANEIDMTEVFGLTVHRKEKLILTPRLQSCVA

Transcript Sequence

Transcript ID

EES11970
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:30398857:30401232:-1 gene:SORBI_3006G043800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACTCTTTGCCTCTCCCCGTGGTCATTTTCCGTCCAATTTGGCCTGCAAAATGCATAGGT
GCTATATCTTTTCTCATATATGCACCTCTCGCATGCATATATATAAGATCATCTGGAAGG
ACGGACGGCATCTCAGTTACCACACCTCGAAACTTTTGAGCTCAAAGTGGCCATCATGGC
ACATCAAGCAACAATAGTTATCGATGATCTCACCACTGCTAATTCACCGCTGCTGAAAGC
AGTTTTCCCACTCCTGGTCCCTGTCATCCTGCTCTTCGTCCTGCTGCGCTACTTCTCTAC
AGGAGCAACAACGACTAATACAAAGCAAGGAAAGAAACTGCTTCCTTCACCTCCGGCCCT
GCCGCTGATCGGGCACCTTCACCTCGTCGGTGCGCACCCGCATGTCTCTATGCGGGGCCT
CGCCGCCCGGCACGGTGGCGAGGACCTCATGCTACTCCGCCTCGGCACGGTCCCGACGCT
TGTGGCGTTCTCCCCGCGCGCCGCACAGGCGGTGCTGCGCACGCACGACCAGTCGCTGGC
GTCGAGGCCCCGCTCCATCTTCGGCGATATCCTCGGTTACGGGCCGTCGGACGTCGGGTT
CGCGCCCTACGGCGAGGGTTGGCGGCAGGCGAAGAAGCTGGTCACCACGCACCTGCTCAA
CACCAAGAAGGTGCAGTCCTACCGCGCCGCCCGCGAGGAGGAGGTGGGACTGGTTGTCGA
CAAGATCCGCTGCGCAGCCATGGCAGGCGCGGCCGTGGACTTGAGCGAGCTCCTGAGCTC
GTTCACGACGGACATGATCTCCCGAGCCGTGGTGGGGCGGTCGTTCAGGGTGGACGGCCT
GGACAAGGTGTTCAAGGAAGCGATGGACGCGAGCATGGCCGTCCTTGGGGGCTTCAACCT
GGAGAACTTTTATCCTGGCCTGGCCAAGGTGGCCGGCGGCGTGCTCATGTGGCCGGGGCG
CCGCAAGGCTGAGAGACTCAGGGACCAGTGGGATGAGGTCCTTGATAAGGTGATCGACCA
GCACGCGAGCATGGCAGCAGCAAGCCACGAGAGTGATTTTACCCATGTGATGCTATCCGT
GCAAGAGGAGTACGGGCTCACCAGAGACGGCATCAAAGGAATCTTGTCTGATATGTTTGC
AGCGGGCACAGACACAGCGTACTTGGTATTAGAATTCACCATGGCTGAGCTGATGCTGCA
CCAAGATGTTATGGCAAGGCTACAGGCAGAGGTGAGAAATAGCATTATGCCTAAGAACCA
AGAAGTCATCACAGAAGAGTACCTCACTGGAATGCCATATCTAAAAGCTGTCATCAAAGA
AACACTCCGATTGCACCCGCCATCACCGCTCCTCCTCCCACATCAGTCACTAGAGGAGTG
CACCATCGATGGCTACGTGGTTCCTGCTGGCACCACCGTGTTTGTCAACGCCTGGGCAAT
CGGCCGCGACCTGAGGTTATGGGATGCTGCTGAGGAGTTCATGCCAGAAAGGTTCATCGA
CAAGGGGGCCACAGAGGGTGTTGATTTTAGAGGAATTGACTTTCAATTTCTGCCATTTGG
GTCCGGCCGAAGGATGTGTCCTGGCATGAATTTTGGCCTGGCCAACGTTGAAATCATGCT
GGCAAATCTTGTGTGCCACTTTGATTGGGAGATGGCGGGAGGAGCCAATGAGATTGACAT
GACAGAGGTGTTTGGATTAACTGTGCACCGAAAAGAGAAGCTTATCCTCACTCCAAGGTT
ACAATCTTGTGTTGCTTAACCACTGGAGGGCTAGGTCAACCAGAATAATAATGATGATGA
TATAAGCGTCACGTATACTGTACATTGCTCATACCTGTTGCTATATGTGTCAAATATTAT
ATGGGTAGCCCATATATTATTTGAAGATAATTAATTGTAGAGCCCATAATAAATGTTATA
GTATAAATAGTTTTATCCCGGATTGTTTTTTGACCTTGTGTTAACTCATCTTAAATATGT
AGTTTGTAAGAGGTCCTATAGAGAAGTTGAGGAATGGTACGCACGCCACCGAGTCGTGCC
GTGGCAAGGCGGGCATGATGAGACGAGACATGGCCTGTGTCACATTTTGCTAGATGGGAT
ATGAGAGGAATAAATGAAAATCAATTGTGTC