Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11686
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:60547686:60550376:1 gene:SORBI_3006G274200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCCACCACCACCTCTGCTCCCGCTTCTCCTCATCCTCCTCGTCACCGTTCCTCTC
TTCCCCACCGCCGCGCCGACGGCCACGACCCTGCCGCTGTACCGCCACCTCCCGCACGTG
GCCGAGGCCGAGGCCGAGGACGCGCACCACCACCCGCTGTCCCGCCTGGCCGCCGCGTCG
CTGGCCCGCGCGTCGCACCTCAAGCGCCGGGGACGCGCCAGCCACCACAGCCAAAAAGGA
TCATCATCAGGCGGCCACAAGTCAATCCCAGCCACCGCCGCACTGTACCCGCACTCCTAC
GGCGGCTACGCCTTCACGGCGTCGCTCGGCACGCCGCCGCAGCCGCTCCCCGTGCTGCTC
GACACCGGCAGCCAGCTCACCTGGGTGCCCTGCACCTCCAACTACGACTGCCGCAACTGC
TCCTCCCCGTTCGCCGCCGCCGTGCCGGTCTTCCACCCCAAGAACTCCTCCTCCTCCCGC
CTCGTCGGCTGCCGCAACCCTTCCTGCCTGTGGGTCCACTCCGCCGAGCACGTCGCCAAG
TGCCGCGCCCCCTGCTCCCGCGGCGCCAACTGCACCCCCGCCAGCAACGTCTGCCCGCCC
TACGCCGTCGTCTACGGCTCCGGCTCCACCGCCGGGCTGCTCATCGCCGACACCCTGCGC
GCGCCGGGGCGCGCCGTTTCTGGCTTCGTCCTCGGATGCAGCCTCGTGTCCGTGCACCAA
CCGCCGTCGGGCCTCGCTGGCTTCGGCCGCGGCGCGCCGTCCGTGCCCGCGCAGCTCGGC
CTCTCCAAATTCTCCTACTGCCTTCTGTCCCGCCGCTTCGACGACAACGCCGCCGTGAGC
GGCTCGCTCGTCCTCGGCGGCGACAACGACGGCATGCAGTACGTGCCCCTGGTGAAGAGC
GCGGCGGGCGACAAGCAGCCGTACGCCGTCTACTACTACCTGGCGCTGTCGGGCGTGACG
GTGGGCGGGAAGGCGGTGCGGCTCCCGGCGCGGGCGTTCGCGGCCAACGCCGCGGGGTCC
GGTGGCGCCATCGTGGACTCCGGCACCACGTTCACGTACCTCGACCCGACGGTGTTCCAG
CCCGTGGCGGACGCGGTGGTGGCGGCGGTGGGAGGGCGGTACAAGCGGTCCAAGGACGTG
GAGGAGGGGCTGGGCCTGCACCCCTGCTTCGCGCTGCCGCAGGGCGCCAAGTCCATGGCG
CTGCCGGAGCTGTCGCTCCACTTCAAGGGCGGCGCGGTGATGCAGCTCCCGCTCGAGAAC
TACTTCGTGGTCGCGGGCCGCGCACCCGTGCCCGGCGCCGGCGCCGGCGCTGGTGCTGCC
GAGGCCATCTGCCTCGCCGTGGTCACCGACTTCGGAGGCTCCGGCGCTGGAGACGAGGGC
GGTGGCCCGGCCATCATCCTCGGCAGCTTCCAGCAGCAGAACTACCTCGTGGAGTACGAC
CTGGAGAAAGAGAGGCTGGGGTTCCGCCGGCAGCCATGCGCGTCGTCGTCGTGA

Peptide Sequence

PEP ID

EES11686
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:60547686:60550376:1 gene:SORBI_3006G274200 transcript:EES11686 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPPPPLLPLLLILLVTVPLFPTAAPTATTLPLYRHLPHVAEAEAEDAHHHPLSRLAAAS
LARASHLKRRGRASHHSQKGSSSGGHKSIPATAALYPHSYGGYAFTASLGTPPQPLPVLL
DTGSQLTWVPCTSNYDCRNCSSPFAAAVPVFHPKNSSSSRLVGCRNPSCLWVHSAEHVAK
CRAPCSRGANCTPASNVCPPYAVVYGSGSTAGLLIADTLRAPGRAVSGFVLGCSLVSVHQ
PPSGLAGFGRGAPSVPAQLGLSKFSYCLLSRRFDDNAAVSGSLVLGGDNDGMQYVPLVKS
AAGDKQPYAVYYYLALSGVTVGGKAVRLPARAFAANAAGSGGAIVDSGTTFTYLDPTVFQ
PVADAVVAAVGGRYKRSKDVEEGLGLHPCFALPQGAKSMALPELSLHFKGGAVMQLPLEN
YFVVAGRAPVPGAGAGAGAAEAICLAVVTDFGGSGAGDEGGGPAIILGSFQQQNYLVEYD
LEKERLGFRRQPCASSS

Transcript Sequence

Transcript ID

EES11686
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:60547686:60550376:1 gene:SORBI_3006G274200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGACAAAGCACGCGCTGCCGCCGCTGGCAGCTTAAAACCCAAACCCCCTCGTCATCCAT
TCCAGCCACGAGCCACCATGGCTCCACCACCACCTCTGCTCCCGCTTCTCCTCATCCTCC
TCGTCACCGTTCCTCTCTTCCCCACCGCCGCGCCGACGGCCACGACCCTGCCGCTGTACC
GCCACCTCCCGCACGTGGCCGAGGCCGAGGCCGAGGACGCGCACCACCACCCGCTGTCCC
GCCTGGCCGCCGCGTCGCTGGCCCGCGCGTCGCACCTCAAGCGCCGGGGACGCGCCAGCC
ACCACAGCCAAAAAGGATCATCATCAGGCGGCCACAAGTCAATCCCAGCCACCGCCGCAC
TGTACCCGCACTCCTACGGCGGCTACGCCTTCACGGCGTCGCTCGGCACGCCGCCGCAGC
CGCTCCCCGTGCTGCTCGACACCGGCAGCCAGCTCACCTGGGTGCCCTGCACCTCCAACT
ACGACTGCCGCAACTGCTCCTCCCCGTTCGCCGCCGCCGTGCCGGTCTTCCACCCCAAGA
ACTCCTCCTCCTCCCGCCTCGTCGGCTGCCGCAACCCTTCCTGCCTGTGGGTCCACTCCG
CCGAGCACGTCGCCAAGTGCCGCGCCCCCTGCTCCCGCGGCGCCAACTGCACCCCCGCCA
GCAACGTCTGCCCGCCCTACGCCGTCGTCTACGGCTCCGGCTCCACCGCCGGGCTGCTCA
TCGCCGACACCCTGCGCGCGCCGGGGCGCGCCGTTTCTGGCTTCGTCCTCGGATGCAGCC
TCGTGTCCGTGCACCAACCGCCGTCGGGCCTCGCTGGCTTCGGCCGCGGCGCGCCGTCCG
TGCCCGCGCAGCTCGGCCTCTCCAAATTCTCCTACTGCCTTCTGTCCCGCCGCTTCGACG
ACAACGCCGCCGTGAGCGGCTCGCTCGTCCTCGGCGGCGACAACGACGGCATGCAGTACG
TGCCCCTGGTGAAGAGCGCGGCGGGCGACAAGCAGCCGTACGCCGTCTACTACTACCTGG
CGCTGTCGGGCGTGACGGTGGGCGGGAAGGCGGTGCGGCTCCCGGCGCGGGCGTTCGCGG
CCAACGCCGCGGGGTCCGGTGGCGCCATCGTGGACTCCGGCACCACGTTCACGTACCTCG
ACCCGACGGTGTTCCAGCCCGTGGCGGACGCGGTGGTGGCGGCGGTGGGAGGGCGGTACA
AGCGGTCCAAGGACGTGGAGGAGGGGCTGGGCCTGCACCCCTGCTTCGCGCTGCCGCAGG
GCGCCAAGTCCATGGCGCTGCCGGAGCTGTCGCTCCACTTCAAGGGCGGCGCGGTGATGC
AGCTCCCGCTCGAGAACTACTTCGTGGTCGCGGGCCGCGCACCCGTGCCCGGCGCCGGCG
CCGGCGCTGGTGCTGCCGAGGCCATCTGCCTCGCCGTGGTCACCGACTTCGGAGGCTCCG
GCGCTGGAGACGAGGGCGGTGGCCCGGCCATCATCCTCGGCAGCTTCCAGCAGCAGAACT
ACCTCGTGGAGTACGACCTGGAGAAAGAGAGGCTGGGGTTCCGCCGGCAGCCATGCGCGT
CGTCGTCGTGAGCGACGTGGATCGGCATGGCGGGATCGGAGTGGAGGCTATTAATTACTC
CAGTCCACGTAGCGGCAATGGTAAATGCAAAAGCTGGCTGTTTGCTCTTTTACTATCGTG
CTTTGCGGATTGTACTGGTAATAAACTAAATTTACTATCGTGTAAGATTGAAAAAAAAAA
TTACTATCGTGTGTGCCTGGCTGCCTGCTCATTCATGTCACATGGATGCGTTTAGAGTTT
AGACGTTGATCATCATCATGGACATGGTATGTGATGTGAGGAAAAGACGAGCAAAAAGAC
GGATGCTTTTCTTTTTCTTTACGGATTGCTTTGGGAAAGAGGGGAAGCATGTGCATCGAT
GCAGCTCATTAGAATTGTTAGTAGTAGTTTATTTTAATCCGTATTGCAGTAATTTTTTAG
CATATTTGATTTCAGCATTTCTCTTGGGCTAAAAACCAAAAATGTAATCATGTGGCTGTG
ATATCGGCGATTGGCTTTCTGGGCTGACGGGTGGAATGTTTGGTGGGGCTCTCTCTTGTC
GCATGTACGTACCTTGATTGCATGTGGTTGTGGGCAGTGCAAGGAGCAGGGCTACTTTCA
ATTGCCCTACCTAATTCACTGCAGTACTGACAGTGGCGACGTGAATGAGGGCATGTGCCA
TTGCTCGCCGTGTCGGCAGTGCAGTGCAAGGCAGGGACCGGAGCGTCTTTGATCAGGATG
TGGTACTTGTGCACTACCGGGCGGCAGTAAAAACATTGTACTCGTACACTAGTGCGACTA
CTAGTTTTTTTTTTCTTTTGAGTAACACTGTACTGCATTCTTTTACTGTTCTGGGCTCGA
GTTTCTGTTTGTACCTCGTTTTCTATCATCAGGCCCGACAACACGCAGTGGGCCTGGCAT
TGATCGTAAGCCTACTACTCCATAGCAGCAGAGGGAACCACTCAAAAAAAAAAAGCAGAG
GGAAGTACGCAATCTCAAAAGACGCGGACGGGGAAGGCCCAAACGAATATGGGCTAATGG
GCCATGCGCATCTTCTTTGTTTCCTTCCTCCTTCGGCTCTTTCCTAAAAGGTTTGTTTGT
AAACATTGCAATTTCCTAAAAGGGTTGTTTGGAAACATAGCTCTTCCCTTC