Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11557
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:58390635:58394032:1 gene:SORBI_3006G243800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTCCCATCTTCCGGCGAGCGACGATCGGATGGGTGTCGCTTCAGCTCATGGTGGCA
GCAGCAGCAGCAGCAGCCTTAGCGGGGCCGCCAGTAACCCTGCCTGGCTGCCGGGAGAGC
TGCGGCGAAGTAAGCGTGCCGTATCCTTTCGGCATCGGCGTGGGCTGCTTCCACGAGGGT
TTCGGCCTCACCTGCGACGACACGCAGCAGCCGCCGAAGCTGCTGCTCTTGGGCGACGAC
GGTGCAGTGGAGGTGCTCAACATCTCCTTGGCGGACGGCACGGTAAGCATCAACAGCACC
GTGTTCTCATCAGCCTCTGACACCGACGACGACTCTCCAGTCCCAGTGTTGAATGGCACA
TGGTCTCTGGCTCTCCCACACCCCCCTCATCAGGCCTCGGCGGGGCCATTCGTGTTGTCG
ATCGAATACAACTGGTTCGTGGCCATGGGCTGCAACATCGTGGCGCAGCTCGTCCCCGTC
GGCTCAGAGAAGAACGCCGCCAGCATCTGCGCCGCCATGTGCGTCCACGATAGGAACGAT
GATATCATCTCTGCTTGTTCGGGTATTGGCCTCTGCCGCACACCTATCAAAGCCTTGGCC
CCTACGTACCATATAAAAGTTGTGTCCGTGCAAGTCTCGATGCCTACTACTCCTACTACA
TCGCAGCTGCTCGACACAACACATGCAGCTGCGTTCATTGTTGACAAGGCATGGTACAGC
ATTTACGGATACGACATGCCAAGCAATACCACCTCCTCGTATTGGCCGCAGAGCGTTCCG
ACAGTGCTGGAGTGGTGGTTGGATCGAATCCACGACGAGGACATGCTGCCAGGGGACGGC
GACGGGGACGGGGACGGGCCTCTTCAGTTTATGTCTAGATGCCTGAGCAACAACAGTTTC
ATATATTACTCGGACGGAAAACATGTCAAGAAACGATGCAGCTGTTCCCAAGGATACCAA
GGCAATCCATACATCAGAGATGGATGCCAAGACATCGATGAGTGTTTACAGCCGGATGTT
TATCCATGCCGTGGAACCTGCGTCAATGTGCCAGGAACATACCAATGCTCACCAAACAAA
AGCACCAGGAGCCTTTCAGTTCCAGGTTTAATTACTATAATAGCAATCAGTGGTGGTTTT
GGACTACTGTTTTCACTTCTTGGTGTTACCAAAATCTCCAAAAAACTTAAGCAACAAAGA
GCCAGGAAATTGAAACAGAAGTTTTTCAAGAGAAACCATGGATTGCTTCTCCAACAGTTG
ATCTCTTCAAATGAAGACATTGCCGAAAGGACAAAGATTTTTAGCTTAGAAGATCTAGAG
CAAGCAACCAATAAATTTGATCAGAATCGGATCCTTGGTGGTGGAGGCCATGGCATAGTA
TACAAAGGCATCTTAGCTGATCAACGCGTTGTGGCCATCAAAAGGTCCAAAATTGTGGTT
CAAAGGGAAATTGATGAGTTCATAAATGAGGTTGTCATACTTTCACAAACCAACCATAGA
AATGTGGTGAAGCTCTTTGGGTGTTGCCTCGAGACGGAAGTTCCTTTACTAGTTTATGAG
TTCATATCAAATGGGACCCTATCATACCATCTTCATGGACAAAGTGAAAGGCCTTTGCCA
TGGAAAGACAGATTGAGGATAGCACTAGAAACTGCAAGGGCAATCGCATATCTGCATTGC
TCAGCTTCCATATCAGTGTTTCATAGAGATATCAAATCTACAAATATACTACTTACCGAT
ACTTTAACAGCAAAAGTGTCAGATTTTGGAGCTTCAAGGTCAATTTCAATAGATGAAACA
GGGATACACACTGCCATTCAAGGAACGCATGGTTACCTTGATCCTGAATATTATTACACT
AGTCGTCTCACCGAGAAGAGTGATGTTTATAGCTTTGGTGTAATCTTAGCAGAGCTATTA
ACAAGGGTTAAACCGGTATTCTCTACTCATTCGTTAGAAGTCAAAAGCCTAGCATCACAC
TTCGTGACTGTGATAAAAGATCATCGTTTGTTAGATATTCTAGACCCACAAATTGTTGAA
GAGGGAGGGGCTGACGATGCTGAGGTTGTTGCGAGGCTTGCAGAAGCATGCTTATGCTTA
AAAGGTGAAGAAAGGCCTACAATAAGGCAAGTGGAGATAACTCTTGAAGGTGTGCCAGGA
TCAAAGGTCCACTCCAGTTCTCGAGTTTCAAGAACAATTCAAATTGTTCAAAAAGATCAG
TCACACAACCGAAGCAAAGGCAATGAAGGAACTACTCTATACAGTTTGGAGAAAGAGTTC
ATACAATCATTTGAAATTCCAAGATGA

Peptide Sequence

PEP ID

EES11557
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:58390635:58394032:1 gene:SORBI_3006G243800 transcript:EES11557 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVPIFRRATIGWVSLQLMVAAAAAAALAGPPVTLPGCRESCGEVSVPYPFGIGVGCFHEG
FGLTCDDTQQPPKLLLLGDDGAVEVLNISLADGTVSINSTVFSSASDTDDDSPVPVLNGT
WSLALPHPPHQASAGPFVLSIEYNWFVAMGCNIVAQLVPVGSEKNAASICAAMCVHDRND
DIISACSGIGLCRTPIKALAPTYHIKVVSVQVSMPTTPTTSQLLDTTHAAAFIVDKAWYS
IYGYDMPSNTTSSYWPQSVPTVLEWWLDRIHDEDMLPGDGDGDGDGPLQFMSRCLSNNSF
IYYSDGKHVKKRCSCSQGYQGNPYIRDGCQDIDECLQPDVYPCRGTCVNVPGTYQCSPNK
STRSLSVPGLITIIAISGGFGLLFSLLGVTKISKKLKQQRARKLKQKFFKRNHGLLLQQL
ISSNEDIAERTKIFSLEDLEQATNKFDQNRILGGGGHGIVYKGILADQRVVAIKRSKIVV
QREIDEFINEVVILSQTNHRNVVKLFGCCLETEVPLLVYEFISNGTLSYHLHGQSERPLP
WKDRLRIALETARAIAYLHCSASISVFHRDIKSTNILLTDTLTAKVSDFGASRSISIDET
GIHTAIQGTHGYLDPEYYYTSRLTEKSDVYSFGVILAELLTRVKPVFSTHSLEVKSLASH
FVTVIKDHRLLDILDPQIVEEGGADDAEVVARLAEACLCLKGEERPTIRQVEITLEGVPG
SKVHSSSRVSRTIQIVQKDQSHNRSKGNEGTTLYSLEKEFIQSFEIPR

Transcript Sequence

Transcript ID

EES11557
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:58390635:58394032:1 gene:SORBI_3006G243800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GATGGGTGTCGCTTCAGCTCCTCCCTGGCCCTGGCGGCAGCAGCGCTCACCAGTAACCCA
AATGATGTGTGACGGCACTGGAATTTCCCTGCTCACTACGACACTTGCCTAGTGCTCTGC
TAGTGGAGTGGCCAAATTTCCCGATTACCTGATCTCTTCAAGCAGCATTCGCGAAGATGA
TGCTGATTTCCTCTTGCAGTCTTCCCCAACCATCCCTTCCCAGCTCGTCAAGCACTCCCC
CTCTCTCAGAAACGACGATCGATGGTTCCCATCTTCCGGCGAGCGACGATCGGATGGGTG
TCGCTTCAGCTCATGGTGGCAGCAGCAGCAGCAGCAGCCTTAGCGGGGCCGCCAGTAACC
CTGCCTGGCTGCCGGGAGAGCTGCGGCGAAGTAAGCGTGCCGTATCCTTTCGGCATCGGC
GTGGGCTGCTTCCACGAGGGTTTCGGCCTCACCTGCGACGACACGCAGCAGCCGCCGAAG
CTGCTGCTCTTGGGCGACGACGGTGCAGTGGAGGTGCTCAACATCTCCTTGGCGGACGGC
ACGGTAAGCATCAACAGCACCGTGTTCTCATCAGCCTCTGACACCGACGACGACTCTCCA
GTCCCAGTGTTGAATGGCACATGGTCTCTGGCTCTCCCACACCCCCCTCATCAGGCCTCG
GCGGGGCCATTCGTGTTGTCGATCGAATACAACTGGTTCGTGGCCATGGGCTGCAACATC
GTGGCGCAGCTCGTCCCCGTCGGCTCAGAGAAGAACGCCGCCAGCATCTGCGCCGCCATG
TGCGTCCACGATAGGAACGATGATATCATCTCTGCTTGTTCGGGTATTGGCCTCTGCCGC
ACACCTATCAAAGCCTTGGCCCCTACGTACCATATAAAAGTTGTGTCCGTGCAAGTCTCG
ATGCCTACTACTCCTACTACATCGCAGCTGCTCGACACAACACATGCAGCTGCGTTCATT
GTTGACAAGGCATGGTACAGCATTTACGGATACGACATGCCAAGCAATACCACCTCCTCG
TATTGGCCGCAGAGCGTTCCGACAGTGCTGGAGTGGTGGTTGGATCGAATCCACGACGAG
GACATGCTGCCAGGGGACGGCGACGGGGACGGGGACGGGCCTCTTCAGTTTATGTCTAGA
TGCCTGAGCAACAACAGTTTCATATATTACTCGGACGGAAAACATGTCAAGAAACGATGC
AGCTGTTCCCAAGGATACCAAGGCAATCCATACATCAGAGATGGATGCCAAGACATCGAT
GAGTGTTTACAGCCGGATGTTTATCCATGCCGTGGAACCTGCGTCAATGTGCCAGGAACA
TACCAATGCTCACCAAACAAAAGCACCAGGAGCCTTTCAGTTCCAGGTTTAATTACTATA
ATAGCAATCAGTGGTGGTTTTGGACTACTGTTTTCACTTCTTGGTGTTACCAAAATCTCC
AAAAAACTTAAGCAACAAAGAGCCAGGAAATTGAAACAGAAGTTTTTCAAGAGAAACCAT
GGATTGCTTCTCCAACAGTTGATCTCTTCAAATGAAGACATTGCCGAAAGGACAAAGATT
TTTAGCTTAGAAGATCTAGAGCAAGCAACCAATAAATTTGATCAGAATCGGATCCTTGGT
GGTGGAGGCCATGGCATAGTATACAAAGGCATCTTAGCTGATCAACGCGTTGTGGCCATC
AAAAGGTCCAAAATTGTGGTTCAAAGGGAAATTGATGAGTTCATAAATGAGGTTGTCATA
CTTTCACAAACCAACCATAGAAATGTGGTGAAGCTCTTTGGGTGTTGCCTCGAGACGGAA
GTTCCTTTACTAGTTTATGAGTTCATATCAAATGGGACCCTATCATACCATCTTCATGGA
CAAAGTGAAAGGCCTTTGCCATGGAAAGACAGATTGAGGATAGCACTAGAAACTGCAAGG
GCAATCGCATATCTGCATTGCTCAGCTTCCATATCAGTGTTTCATAGAGATATCAAATCT
ACAAATATACTACTTACCGATACTTTAACAGCAAAAGTGTCAGATTTTGGAGCTTCAAGG
TCAATTTCAATAGATGAAACAGGGATACACACTGCCATTCAAGGAACGCATGGTTACCTT
GATCCTGAATATTATTACACTAGTCGTCTCACCGAGAAGAGTGATGTTTATAGCTTTGGT
GTAATCTTAGCAGAGCTATTAACAAGGGTTAAACCGGTATTCTCTACTCATTCGTTAGAA
GTCAAAAGCCTAGCATCACACTTCGTGACTGTGATAAAAGATCATCGTTTGTTAGATATT
CTAGACCCACAAATTGTTGAAGAGGGAGGGGCTGACGATGCTGAGGTTGTTGCGAGGCTT
GCAGAAGCATGCTTATGCTTAAAAGGTGAAGAAAGGCCTACAATAAGGCAAGTGGAGATA
ACTCTTGAAGGTGTGCCAGGATCAAAGGTCCACTCCAGTTCTCGAGTTTCAAGAACAATT
CAAATTGTTCAAAAAGATCAGTCACACAACCGAAGCAAAGGCAATGAAGGAACTACTCTA
TACAGTTTGGAGAAAGAGTTCATACAATCATTTGAAATTCCAAGATGATATTTGATTTTA
TGGGTTCATATTTTTTAGTAACTTTTAGTGCCATTTTGCTAACTTGGCATCAATTCTAAA
CTTAGAGATACCTTGTGCACCTCCACAATATTATGGTTGATGTAGAACCAATAAGTTATA
TACTAGTAGTAAATAAGTGAACTTTGTTCATTTTATTTTTTTTTTATTTTTTT