Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11538
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57905933:57910630:1 gene:SORBI_3006G237900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCAGAAGAGGTCCCCGCGCCGGCGGCGGATCGAATTCGGGTGGTCGGCAAGTGG
GCCGGCGCCCTGGAGGTGGACCTGGGCGCCTGGACGGTGCCGATGCTTCGGGCGGAGGTG
GCGCGGCGGGTTGGGGACGGCGTGGGGCCTGAGTGCGTCGGCCTCATCTTCGGCGGCCGC
GTGCTCAAGGATGAACCCCCCGCCTCGCTGCGGGAGGCCGGACTTAAGGCCAACGCCAAG
GTGCTCTCCTCCCTTACCTCCCCCGATCGCGCCAAAGAAATCGCCGCCGAGGCCGCCAAG
GCCAAGGCTGAGGAGGAGCACGCTGCAAGGCTTGTCAGGCTGTGGGAAGCTGCAAAAGCA
TTGTCTCAAAGGCACACGGATGGCTCCTACCTTGCGGAAGAAGACTACAACTTAGATCTT
GAGGATCAAAGTGGCCAGAAAGTGATGTTTGGATCTGTAGATGATAAAAAGGCTTTGACG
ATGGCTCTAATGCTTCACCAAAAAGCTAAAACTCAGATGAAGAGGCAAATGTATAAGGAA
GCCCTAGATGTGTTAACAATGGCTGAGGAAGCTTTCTCCCTTTGTGACCCAAAGCTTATT
GAGAAAGTTGATAATGTGCCAATGCTTCAACTAGATATAGTATGGTGTTATTTTGTGCTT
CGTGATGTATCATGCTTAGAGGTCGCCGGGACTCGCCTAGAAAAAGCACGGTTAGGTTTT
GAACGTTCTCATGGGAAAGATTCCACTCGCTTCAGAATACTCCAGGCTGGCCGGCAAGCT
GATCTTGCTATTTATGTAAGGCTGGAGCTTTTGGAAGGAGTGGTGGCATACCATAATGGT
CATGTTGAAAAGGCGCGTGGATGTCTCACTTCTGCCCATGCTAAATACCTGCAGCTTCAA
GTACCAGAGGAAGCTATATCGATGTTAATGGATATGGGCTATGAACCACGATCTGCAAAA
AGAGCATTGAAGATGACTGGCTATGATATTCAATCATCAGTTGAACTCTTATGTGAGGAG
CGTGAAAAGAAATTTCGTAGAAGAGAGGAGGACCGAGTTAGACAACGAGAGATTCTAGAA
CAAATGGCATATGGTAAAACTCCAATGAACAAGGCAGTTGACATGCAGAAGCTGAAAGGC
TTGACTGCTATCGGATTTGAGAAGTATCTTGCTGCAGAAGCACTGCGCATAAATGAAAAT
GATGCTGACAAAGCGTTAGACCTTTTGACAAATCCTGAACAAAACTGCATCCTACAAAGT
AAAATTCAGGCAAAGAGAAGCCGGGCATCTCGTGGGTTTAGTGCAGGATCATCGAGCTCC
AGGGCAGCTGTTGCCAGGGCTGCTCCAGCAATCAACAACTCTCAGACTTCTGTCAATGAT
GTACCACATCCTGCTGATGGAGATGCTCCACCACATCCTGCAGATGGAGGAGCACCACAT
CCTGCGGATGGAGGAGATGCTCCTCCACATGCTGCAGATGGAGATGCCCCTCCACATGCT
GCAGACGGAGATGCCCCTCCGATGAACAATGAAGAAACTGCAAACCAAGATGAAATTATG
ATTGATGAAGTAGCTGCCGATGATGAAAACGAAGGCGCAAACTCTCATCCAGTTCCAGCC
AGGGATGCGTCGATGGAAAGTGAGCTTGCCAATGAACTGACGGGGGATGCCTTGGATGAC
TACGATATTGATGTCAGTAACGAAGGACAGGCTATTGCAGAGTACTTGAGCCTACTGGAG
GCTGCTCCTAGTAGTTCTTAG

Peptide Sequence

PEP ID

EES11538
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57905933:57910630:1 gene:SORBI_3006G237900 transcript:EES11538 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASEEVPAPAADRIRVVGKWAGALEVDLGAWTVPMLRAEVARRVGDGVGPECVGLIFGGR
VLKDEPPASLREAGLKANAKVLSSLTSPDRAKEIAAEAAKAKAEEEHAARLVRLWEAAKA
LSQRHTDGSYLAEEDYNLDLEDQSGQKVMFGSVDDKKALTMALMLHQKAKTQMKRQMYKE
ALDVLTMAEEAFSLCDPKLIEKVDNVPMLQLDIVWCYFVLRDVSCLEVAGTRLEKARLGF
ERSHGKDSTRFRILQAGRQADLAIYVRLELLEGVVAYHNGHVEKARGCLTSAHAKYLQLQ
VPEEAISMLMDMGYEPRSAKRALKMTGYDIQSSVELLCEEREKKFRRREEDRVRQREILE
QMAYGKTPMNKAVDMQKLKGLTAIGFEKYLAAEALRINENDADKALDLLTNPEQNCILQS
KIQAKRSRASRGFSAGSSSSRAAVARAAPAINNSQTSVNDVPHPADGDAPPHPADGGAPH
PADGGDAPPHAADGDAPPHAADGDAPPMNNEETANQDEIMIDEVAADDENEGANSHPVPA
RDASMESELANELTGDALDDYDIDVSNEGQAIAEYLSLLEAAPSSS

Transcript Sequence

Transcript ID

EES11538
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57905933:57910630:1 gene:SORBI_3006G237900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCGGTTTACCATGCTCCTTCGGTTCTCCTTCCTCATCTTCTTCCTGCCCAAGTTATCTT
TCCCGAACACTCTGTTTACTCTCCTGATAAGAAGGCTCGCCGGACCCAAAGTCCCGAACA
CTCTGTTTACAAAAAACCACGGAAAAACCATCGACGCACCCAAGTCCCCAACAGTCGAGT
CAAGCCTCAACTCCAACTCCGATCATCCCGATGGCGTCAGAAGAGGTCCCCGCGCCGGCG
GCGGATCGAATTCGGGTGGTCGGCAAGTGGGCCGGCGCCCTGGAGGTGGACCTGGGCGCC
TGGACGGTGCCGATGCTTCGGGCGGAGGTGGCGCGGCGGGTTGGGGACGGCGTGGGGCCT
GAGTGCGTCGGCCTCATCTTCGGCGGCCGCGTGCTCAAGGATGAACCCCCCGCCTCGCTG
CGGGAGGCCGGACTTAAGGCCAACGCCAAGGTGCTCTCCTCCCTTACCTCCCCCGATCGC
GCCAAAGAAATCGCCGCCGAGGCCGCCAAGGCCAAGGCTGAGGAGGAGCACGCTGCAAGG
CTTGTCAGGCTGTGGGAAGCTGCAAAAGCATTGTCTCAAAGGCACACGGATGGCTCCTAC
CTTGCGGAAGAAGACTACAACTTAGATCTTGAGGATCAAAGTGGCCAGAAAGTGATGTTT
GGATCTGTAGATGATAAAAAGGCTTTGACGATGGCTCTAATGCTTCACCAAAAAGCTAAA
ACTCAGATGAAGAGGCAAATGTATAAGGAAGCCCTAGATGTGTTAACAATGGCTGAGGAA
GCTTTCTCCCTTTGTGACCCAAAGCTTATTGAGAAAGTTGATAATGTGCCAATGCTTCAA
CTAGATATAGTATGGTGTTATTTTGTGCTTCGTGATGTATCATGCTTAGAGGTCGCCGGG
ACTCGCCTAGAAAAAGCACGGTTAGGTTTTGAACGTTCTCATGGGAAAGATTCCACTCGC
TTCAGAATACTCCAGGCTGGCCGGCAAGCTGATCTTGCTATTTATGTAAGGCTGGAGCTT
TTGGAAGGAGTGGTGGCATACCATAATGGTCATGTTGAAAAGGCGCGTGGATGTCTCACT
TCTGCCCATGCTAAATACCTGCAGCTTCAAGTACCAGAGGAAGCTATATCGATGTTAATG
GATATGGGCTATGAACCACGATCTGCAAAAAGAGCATTGAAGATGACTGGCTATGATATT
CAATCATCAGTTGAACTCTTATGTGAGGAGCGTGAAAAGAAATTTCGTAGAAGAGAGGAG
GACCGAGTTAGACAACGAGAGATTCTAGAACAAATGGCATATGGTAAAACTCCAATGAAC
AAGGCAGTTGACATGCAGAAGCTGAAAGGCTTGACTGCTATCGGATTTGAGAAGTATCTT
GCTGCAGAAGCACTGCGCATAAATGAAAATGATGCTGACAAAGCGTTAGACCTTTTGACA
AATCCTGAACAAAACTGCATCCTACAAAGTAAAATTCAGGCAAAGAGAAGCCGGGCATCT
CGTGGGTTTAGTGCAGGATCATCGAGCTCCAGGGCAGCTGTTGCCAGGGCTGCTCCAGCA
ATCAACAACTCTCAGACTTCTGTCAATGATGTACCACATCCTGCTGATGGAGATGCTCCA
CCACATCCTGCAGATGGAGGAGCACCACATCCTGCGGATGGAGGAGATGCTCCTCCACAT
GCTGCAGATGGAGATGCCCCTCCACATGCTGCAGACGGAGATGCCCCTCCGATGAACAAT
GAAGAAACTGCAAACCAAGATGAAATTATGATTGATGAAGTAGCTGCCGATGATGAAAAC
GAAGGCGCAAACTCTCATCCAGTTCCAGCCAGGGATGCGTCGATGGAAAGTGAGCTTGCC
AATGAACTGACGGGGGATGCCTTGGATGACTACGATATTGATGTCAGTAACGAAGGACAG
GCTATTGCAGAGTACTTGAGCCTACTGGAGGCTGCTCCTAGTAGTTCTTAGTATGTCACC
AAAGATCTACAGTGCTCGATAGGTATCTACAGCTTTAGAAGGAGAAACACAGGTGGTCTC
AAATGGGGAGTTCGACTTAGTACGGTCGATTTGTACATAAATAATGCTACCCTTATGGAT
TAATTATATATGATGCTTAGAAATCTCTTAACATTGTGTCGATTGTCGAAGTAGTCTCTT
GAATACAGAGTTACGTGGGCGCTCTGACATGTTTGCTTGATATATGAAAGTTCAGAAGCA
CATAGCTTGTAGCGTGTTCTGAAATGAATCATCAGGCGAGTATGCTTCTGACATGTTCCC
AGTTTCTGG