Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11533
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57866698:57873960:1 gene:SORBI_3006G237400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGTTTGACAGTGCTCAAAATGCTCAATATGGACACAGAGAGTTTATTAGGCTGGAC
GAGTCAAGTCCTAGATCATCTGTACCTTCTGAAGTGGGAGGCAGGAGTACCTTGAGGTTC
AGCATGCCTGGATTTGGTTATGGTTCATTTAATGCACTAAGGTCTTTCTTGTCAGGGGTC
CGGAAGGGCTCTGGAAGACTGAAGTCATTTAGACAGTCACTTACATCTGGTGCTCCTAAG
ACAGCTTTTGCGGAAGATCTTAAATCATATAAGAGAAATATATTCGATCCCCAGGACAAA
CTTCTCTTTCAAATGAACTGGGTTTTCTTCTCGTCTTGTCTTTTTGCTGTTGCAGTGGAT
CCACTATTCTTCTTTCTACCCATCATCAACACTCCAAACTGCATTGGTATAGATAAAAAA
TTGGCACTGACATCAACAATAATACGGACGGTTATTGATTTTGTCTACCTTATACGTGTG
TGTCTTCAATTCCGCACTGCTTATGTCGCCCCGTCTTCTCGAGTGTTTGGAACTGGCGAG
CTTGTGATTGATCCAATGCTAATAGCAAAGCGATACATTAAAAGTTACTTTGCGATGGAC
GTTGTTGCATTGCTACCACTTCCACAGATTGTTGTTTGGAGATATCTCCACATTCCAGAT
GGCCCAGACGTACTGACTACGAAAACTGCACTGGTTTGGGTTGTTTTGATTCAGTACATT
CCAAGGTTGTTTCGAATATTCCCTGTCACCACAGATTTGAAAAGAACAGCTGGTGTTTTT
ATTGAAACTGCTTGGGCTGGTGCTGCTTATTATCTGCTATGGTTTATGCTTGCTGGTCAT
AATGTTGGTACTTTGTGGTACTTTTTAACCATAGAACGTGAAGATGACTGCTGGCGTCAG
TACTGTGATCCAAATACTGGATGTAATAGCAGCTACCTGTATTGCAGTAATAATCATCCG
GGCAGCTATACTAGTTGGCTTAATAGTAATAGTACTCAAGTATTCAGCATGTGCAATGGC
AATCAATCTTATGCTTTCAACTTTGGCATTTATGAGCAAGCACTGGTCTCTGGAATACTT
GGTCCAGGAAATTTTATCTCAAAATTATGTTATTGCTTCTGGTGGGGACTGCAAAACCTG
AGTACACTTGGTCAAGGGCTTATGACAAGCACATACACTGGAGAAGTGTTATTCTCTATT
GCAATATGTGTCCTTGGACTAATTCTTTTTGCTCTCCTCATTGGTAACATGCAGAGCTAC
CTACAATCTGTTGCTATACGCCTTGAAGAGATGAGAGTTAAGAAACGTGATGCTGAGCAG
TGGATGCATCACCGTTCACTGCCACCGGAAATCAGACATCGGGTGAGGAAGTATGAACGT
TATCGGTGGTTGGAAACCAGGGGAGTAGATGAAGAAAGTTTGGTTCAAACTCTTCCGAAA
GATCTTAGGCGGGATATCAAGCGTCATCTTTGTTTGGGCTTAGTGAAAAGGGTGCCTTTG
TTTGAAAATATGGATGAACGGTTATTGGATGCAATATGTGAGCGGTTAAGACCTGCACTC
TACACAGAAAATGAATTCATTTTGAGAGAAGGTGATCCGGTGGATGAGATGCATTTTATT
CTTCATGGTTGTTTGGAGAGTGTAACCACTGATGGTGGACGGAGTGGATTCTTTAACAAG
GTCCAGCTAAAGGAAGGATCATTCTGTGGTGATGAGTTGCTCACTTGGGCATTAGATCCC
AAGTCAGCTGCTAATTTTCCAGTTTCAAGCAGGACTGTCAAGGCACTCACCGAGGTTGAG
GCATTTGCCCTATGTGCAGAAGAGCTGAAATTCGTGGCCAGTCAGTTCAGGAGGCTGCAC
AGCAGGCAAGTACAACACACATTCCGATTCTATTCCCAGCAATGGAGGACCTGGGCAGCT
TGCTTCATCCAAGCGGCATGGCGCCGTTATTACAAGAGGAAGATGGCAGAGCAGCGGCGC
AAAGAAGAAGAGGCGGCAAGCCGGCCAAGTAGTAGTCACCCTAGCCTTGGGGCGACTATC
TATGCATCTCGTTTTGCAGCTAACGCCATGCGAGGGGTTCACAGGCTAAGAAGCAAGGCT
GTCCCTACCATTGTCAGGCTGCCAAAACCCCCAGAGCCAGATTTTGGTGTCGACGATGCT
GACTAA

Peptide Sequence

PEP ID

EES11533
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57866698:57873960:1 gene:SORBI_3006G237400 transcript:EES11533 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMFDSAQNAQYGHREFIRLDESSPRSSVPSEVGGRSTLRFSMPGFGYGSFNALRSFLSGV
RKGSGRLKSFRQSLTSGAPKTAFAEDLKSYKRNIFDPQDKLLFQMNWVFFSSCLFAVAVD
PLFFFLPIINTPNCIGIDKKLALTSTIIRTVIDFVYLIRVCLQFRTAYVAPSSRVFGTGE
LVIDPMLIAKRYIKSYFAMDVVALLPLPQIVVWRYLHIPDGPDVLTTKTALVWVVLIQYI
PRLFRIFPVTTDLKRTAGVFIETAWAGAAYYLLWFMLAGHNVGTLWYFLTIEREDDCWRQ
YCDPNTGCNSSYLYCSNNHPGSYTSWLNSNSTQVFSMCNGNQSYAFNFGIYEQALVSGIL
GPGNFISKLCYCFWWGLQNLSTLGQGLMTSTYTGEVLFSIAICVLGLILFALLIGNMQSY
LQSVAIRLEEMRVKKRDAEQWMHHRSLPPEIRHRVRKYERYRWLETRGVDEESLVQTLPK
DLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPALYTENEFILREGDPVDEMHFI
LHGCLESVTTDGGRSGFFNKVQLKEGSFCGDELLTWALDPKSAANFPVSSRTVKALTEVE
AFALCAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYYKRKMAEQRR
KEEEAASRPSSSHPSLGATIYASRFAANAMRGVHRLRSKAVPTIVRLPKPPEPDFGVDDA
D

Transcript Sequence

Transcript ID

EES11533
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57866698:57873960:1 gene:SORBI_3006G237400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTCCCCTTTGCTCGCTCGCGGACCCCCGACCCCGACTCCGACTCCCAGCGGCGCACTCG
CGCCAGCAAGCTCGAATCCGCACGCCGCCGCCGCCGCCCCCACGGCGCCCAGGTAACCGT
CTTACCCTCTCGGTTCCTCGAAATACTTCTCGGATCCTCTCCACAGCGCGGAGTTCGTCA
GGAAACCGTCCGTTCGATTCTTGGAGCTATGATTCGCGCCTCCTTCCTAGACGAGTAGAT
CCGGATTAGCCTGCGAGGACCACAACACCGGCAATTCGGCTGCTACCGCTGTCGCTAGTC
GTGCGGGTAACGGAGGCGCAGCCCTGCGTCGTCTGCCTCCATAGCACGGGGGCACCCCTG
ATTGTGCAAGTCAAACAATGACGACGAGTCGCCTGCGCTGCTCGTGCAGAGCTTATCTTA
TCTGTAGCTTTACCATCTGTAGCTTTACCATCTCTAACTTACTGTCATGCAAATGGGAAA
TGTTTCCTAATCTGGCTAGTTTGCTTGTATGATGCCTACGGGAAATGATAGTGTTCCCTA
AACTGGCTAGTTTGCCTGTATGATGCCTACAGCCCTACGGTACTTGCCATTTTTGTATGC
CTATGCTTTATCTGTGAGGTGTGCTACTGTTTCTTTTGTGAGTATTGATTATGTCTTGTT
GCTCAATTATATCAGGATCAGGGTGTTTGGCGTGCAGGGGTGGGCGGTTGGCTTCTGAGA
ACATGTAACAGGGGTTGATATGAATATAGGTTCCTTGAATAGCAGGTTCCTTAGCAGTTT
GGCACTCCTTGGAGCCACTGAAGATTTCTCGTGCCCTTTGTCATTACCATTTACCTCCAC
ACCTCCATTGAGTTAGAGGTATGCTGTTGTACTGATTTTCTTTGACATGATTTTACCATC
CATGTAGTTTTGAAATTTCTGCAATATCTATGAAATGCGGCTTTTGAATGATTGGTTTAG
GGTCTGTAACACTAATTCTGGTAGGAAGAGTTATGATGGAAAGACACTTATTTGTTGCCT
CATTTTCTTTTAGATTTCTTCAATCTGTTGAGCCTTGTATATAAGGAAAAGAAATATTTT
ATGCATGTGATGGAAATGTAAGTTTGATGTCATGAGTTTTTTTGTGGCAATACATTGCTA
TTCAAGGTGTAAGGAGTAGGATCTCTTTTGGAGAGAAATGTTGGTGCTTCAAATCAATTG
ATATTTAGTTATTATTTTCTCATACTGCCTGGTTAACTCATTTATGGAGTGCTTTTGTTG
AGAGTATTCTATGATGCATTCTGCCATTATGTGATCCTAGAAATTTGCATAAGATATGTA
TCATATGTTCATGAATTGTCAGCTCTAATTCAGAAAGGTAATTTAGAAGAAAGTATAATT
GTTCTGACTTATGATAATGTCTTTGTTCGAAATATTAGTACTTTGAATTTTAGGTTATAT
CTACTATTTGTATATTAGTAACTTATGGATTATTCAAATTTACTCACCCAATGTATTGTG
TTATTATACTATTTCAATCCCCTTGATATGTAGTCATGTATTTTATTCACTTCTGTGTTT
CATATCTTTTGGGTAATTCTAACTATTTAATTGTCATGTCTTTCTGAATTTCCAGCATTT
TTCATTGTATTTTCAGCTTCGGCGATGATGTTTGACAGTGCTCAAAATGCTCAATATGGA
CACAGAGAGTTTATTAGGCTGGACGAGTCAAGTCCTAGATCATCTGTACCTTCTGAAGTG
GGAGGCAGGAGTACCTTGAGGTTCAGCATGCCTGGATTTGGTTATGGTTCATTTAATGCA
CTAAGGTCTTTCTTGTCAGGGGTCCGGAAGGGCTCTGGAAGACTGAAGTCATTTAGACAG
TCACTTACATCTGGTGCTCCTAAGACAGCTTTTGCGGAAGATCTTAAATCATATAAGAGA
AATATATTCGATCCCCAGGACAAACTTCTCTTTCAAATGAACTGGGTTTTCTTCTCGTCT
TGTCTTTTTGCTGTTGCAGTGGATCCACTATTCTTCTTTCTACCCATCATCAACACTCCA
AACTGCATTGGTATAGATAAAAAATTGGCACTGACATCAACAATAATACGGACGGTTATT
GATTTTGTCTACCTTATACGTGTGTGTCTTCAATTCCGCACTGCTTATGTCGCCCCGTCT
TCTCGAGTGTTTGGAACTGGCGAGCTTGTGATTGATCCAATGCTAATAGCAAAGCGATAC
ATTAAAAGTTACTTTGCGATGGACGTTGTTGCATTGCTACCACTTCCACAGATTGTTGTT
TGGAGATATCTCCACATTCCAGATGGCCCAGACGTACTGACTACGAAAACTGCACTGGTT
TGGGTTGTTTTGATTCAGTACATTCCAAGGTTGTTTCGAATATTCCCTGTCACCACAGAT
TTGAAAAGAACAGCTGGTGTTTTTATTGAAACTGCTTGGGCTGGTGCTGCTTATTATCTG
CTATGGTTTATGCTTGCTGGTCATAATGTTGGTACTTTGTGGTACTTTTTAACCATAGAA
CGTGAAGATGACTGCTGGCGTCAGTACTGTGATCCAAATACTGGATGTAATAGCAGCTAC
CTGTATTGCAGTAATAATCATCCGGGCAGCTATACTAGTTGGCTTAATAGTAATAGTACT
CAAGTATTCAGCATGTGCAATGGCAATCAATCTTATGCTTTCAACTTTGGCATTTATGAG
CAAGCACTGGTCTCTGGAATACTTGGTCCAGGAAATTTTATCTCAAAATTATGTTATTGC
TTCTGGTGGGGACTGCAAAACCTGAGTACACTTGGTCAAGGGCTTATGACAAGCACATAC
ACTGGAGAAGTGTTATTCTCTATTGCAATATGTGTCCTTGGACTAATTCTTTTTGCTCTC
CTCATTGGTAACATGCAGAGCTACCTACAATCTGTTGCTATACGCCTTGAAGAGATGAGA
GTTAAGAAACGTGATGCTGAGCAGTGGATGCATCACCGTTCACTGCCACCGGAAATCAGA
CATCGGGTGAGGAAGTATGAACGTTATCGGTGGTTGGAAACCAGGGGAGTAGATGAAGAA
AGTTTGGTTCAAACTCTTCCGAAAGATCTTAGGCGGGATATCAAGCGTCATCTTTGTTTG
GGCTTAGTGAAAAGGGTGCCTTTGTTTGAAAATATGGATGAACGGTTATTGGATGCAATA
TGTGAGCGGTTAAGACCTGCACTCTACACAGAAAATGAATTCATTTTGAGAGAAGGTGAT
CCGGTGGATGAGATGCATTTTATTCTTCATGGTTGTTTGGAGAGTGTAACCACTGATGGT
GGACGGAGTGGATTCTTTAACAAGGTCCAGCTAAAGGAAGGATCATTCTGTGGTGATGAG
TTGCTCACTTGGGCATTAGATCCCAAGTCAGCTGCTAATTTTCCAGTTTCAAGCAGGACT
GTCAAGGCACTCACCGAGGTTGAGGCATTTGCCCTATGTGCAGAAGAGCTGAAATTCGTG
GCCAGTCAGTTCAGGAGGCTGCACAGCAGGCAAGTACAACACACATTCCGATTCTATTCC
CAGCAATGGAGGACCTGGGCAGCTTGCTTCATCCAAGCGGCATGGCGCCGTTATTACAAG
AGGAAGATGGCAGAGCAGCGGCGCAAAGAAGAAGAGGCGGCAAGCCGGCCAAGTAGTAGT
CACCCTAGCCTTGGGGCGACTATCTATGCATCTCGTTTTGCAGCTAACGCCATGCGAGGG
GTTCACAGGCTAAGAAGCAAGGCTGTCCCTACCATTGTCAGGCTGCCAAAACCCCCAGAG
CCAGATTTTGGTGTCGACGATGCTGACTAACGAAACAATCACACTGAACTCGCTTGTAAT
TGTACTTTACCTCGTCTGTAGATTATGTACAAAATTCAATGACAGCTGCAGAAGATAATG
TTTGTAAAGGTTTGTAACCACGCAAAGACAGACCATAACGGAGGTATATCCTGCTTGACG
TTTATGGAAATGCAAATGTATTTTTGCCTG