Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11532
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:57851916:57856341:1 gene:SORBI_3006G237100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA description:hypothetical protein
Sequence

ATGCCGCCGCCTCTCCAGGCCCACCGCCTCCTCATCTCCCACCGCCGCCTCCCCTCTCCC
GCTCGCCGCCGGTTCACCGCCGCGTCTTCCCTCCAATCCGCTCCCGCCACAACCCTGGCC
CCGGGTCCCGCCACATCCTCCATCCTCTCCATCCGCGAGTCGCTCCTTTCCGGCGAGAGG
ACAGCGGCGGACATCACCTCCGAGTACCTCTCCCGCCTCCGCCGTACCGAGCCGAGCTTG
CGCAGCTTCATCCACGTCGCGGACGCCGCCGCCGAGCGGGAGGCGGAGGAACTCGACCGG
AGGATTGCGTCCGGGGAGAAGGATGCGGTGGGGCCGCTCGCTGGAGTGCTGGTGGGAGTG
AAGGACAACCTCTGCACCGCCAACATGCCCTCCACGGGCGGGTCGCGGATACTAGACGGG
TACCGGCCGGCGTACGACGCCACGGCCGTGCGGCGGCTGCAGGAGGCCGGCGCTATTGTG
GTGGGGAAGACGAACCTCGACGAATTCGGAATGGGGAGCACCACCGAGGGCTCCGCGTTT
CAGGTGACGACAAACCCGTGGGATGATTCACGTGTGCCTGGGGGATCCTCTGGTGGTTCT
GCTTCTGCGGTATCTGCTAGGCAATGTGTAGTGTCACTAGGAAGCGACACAGGGGGGAGT
GTGAGACAACCAGCGTCATTTTGCGGTGTAGTGGGGTTGAAGCCAACTTATGGTCGGGTT
TCTCGTTTTGGTCTCATGGCCTATGCTTCATCGCTGGATGTTGTGGGATGCTTTGGTTCA
TCTGTTTTTGACACTGCAACCATCTTATCTGTTGTTGCTGGCCATGACAAGATGGACTCA
ACCAGCAGTTCACAGGTTGTTCCAGACTATGCATCGGAGTTGGTCTCCCTAGATTTACTA
GAATCAAAACCATTGGCTGGTCTGAGAATTGGGATTATACAAGAAACTCTTGGAGAAGGT
GTTGCCAACGGAGTCATATCATCAATCAAGGGTGCTGCTTCACACCTGGAGCAGTTGGGA
TCTGTAGTGGAAGAGGTTTCACTGCCTTCATTTTCTCTTGGCTTACCAGCATATTACATA
CTAGCCTCATCTGAAGCTTCTTCTAATCTATCACGCTATGATGGTATCAGGTATGGAAGA
CAGTTTTCAGCTGATGACTTGAATGAGCTTTATGGAGAGTCCAGGGCTAATGGTTTGGGT
CATGAGGTCAAAATGAGAATTTTGATGGGAACCTATGCTCTTTCTGCCGGGTACTATGAT
GCATACTACAAACGAGCACAACAGGTGAGGACACTGGTTAAGGAAAGCTTCAAAGATGCT
TTGGAAAGATATGACATTCTAATTTCACCAGCTGCGCCATCAGCAGCCTACAAGATAGGT
GAAAAGATAAATGATCCATTAGCCATGTACGCAGGAGATATCTTGACGGTGAATGTTAAT
TTGGCGGGTCTTCCTGCATTGGTTGTGCCTTGTGGATTTGTTGAAGGTGGACCTGCAGGG
CTCCCAGTTGGACTTCAGCTGATCGGATCTCCATTCTGTGAGGGGAATTTGCTGAGAGTA
GGCCACATCTTTGAGCAGACTCTTCAGAATCTCAGCTTTGTTCCACCGTTGTTGGCAGAG
AGCTAG

Peptide Sequence

PEP ID

EES11532
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:57851916:57856341:1 gene:SORBI_3006G237100 transcript:EES11532 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA description:hypothetical protein
Sequence

MPPPLQAHRLLISHRRLPSPARRRFTAASSLQSAPATTLAPGPATSSILSIRESLLSGER
TAADITSEYLSRLRRTEPSLRSFIHVADAAAEREAEELDRRIASGEKDAVGPLAGVLVGV
KDNLCTANMPSTGGSRILDGYRPAYDATAVRRLQEAGAIVVGKTNLDEFGMGSTTEGSAF
QVTTNPWDDSRVPGGSSGGSASAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRV
SRFGLMAYASSLDVVGCFGSSVFDTATILSVVAGHDKMDSTSSSQVVPDYASELVSLDLL
ESKPLAGLRIGIIQETLGEGVANGVISSIKGAASHLEQLGSVVEEVSLPSFSLGLPAYYI
LASSEASSNLSRYDGIRYGRQFSADDLNELYGESRANGLGHEVKMRILMGTYALSAGYYD
AYYKRAQQVRTLVKESFKDALERYDILISPAAPSAAYKIGEKINDPLAMYAGDILTVNVN
LAGLPALVVPCGFVEGGPAGLPVGLQLIGSPFCEGNLLRVGHIFEQTLQNLSFVPPLLAE
S

Transcript Sequence

Transcript ID

EES11532
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:57851916:57856341:1 gene:SORBI_3006G237100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA description:hypothetical protein
Sequence

ATCCTCACCTTCCCCTTCCCACTGCTCAGCCATCCCCAAAACCCGCGCACACCGGCGACG
GCCGGAGAACCTCCCCGCCGGCAACAGCCATGCCGCCGCCTCTCCAGGCCCACCGCCTCC
TCATCTCCCACCGCCGCCTCCCCTCTCCCGCTCGCCGCCGGTTCACCGCCGCGTCTTCCC
TCCAATCCGCTCCCGCCACAACCCTGGCCCCGGGTCCCGCCACATCCTCCATCCTCTCCA
TCCGCGAGTCGCTCCTTTCCGGCGAGAGGACAGCGGCGGACATCACCTCCGAGTACCTCT
CCCGCCTCCGCCGTACCGAGCCGAGCTTGCGCAGCTTCATCCACGTCGCGGACGCCGCCG
CCGAGCGGGAGGCGGAGGAACTCGACCGGAGGATTGCGTCCGGGGAGAAGGATGCGGTGG
GGCCGCTCGCTGGAGTGCTGGTGGGAGTGAAGGACAACCTCTGCACCGCCAACATGCCCT
CCACGGGCGGGTCGCGGATACTAGACGGGTACCGGCCGGCGTACGACGCCACGGCCGTGC
GGCGGCTGCAGGAGGCCGGCGCTATTGTGGTGGGGAAGACGAACCTCGACGAATTCGGAA
TGGGGAGCACCACCGAGGGCTCCGCGTTTCAGGTGACGACAAACCCGTGGGATGATTCAC
GTGTGCCTGGGGGATCCTCTGGTGGTTCTGCTTCTGCGGTATCTGCTAGGCAATGTGTAG
TGTCACTAGGAAGCGACACAGGGGGGAGTGTGAGACAACCAGCGTCATTTTGCGGTGTAG
TGGGGTTGAAGCCAACTTATGGTCGGGTTTCTCGTTTTGGTCTCATGGCCTATGCTTCAT
CGCTGGATGTTGTGGGATGCTTTGGTTCATCTGTTTTTGACACTGCAACCATCTTATCTG
TTGTTGCTGGCCATGACAAGATGGACTCAACCAGCAGTTCACAGGTTGTTCCAGACTATG
CATCGGAGTTGGTCTCCCTAGATTTACTAGAATCAAAACCATTGGCTGGTCTGAGAATTG
GGATTATACAAGAAACTCTTGGAGAAGGTGTTGCCAACGGAGTCATATCATCAATCAAGG
GTGCTGCTTCACACCTGGAGCAGTTGGGATCTGTAGTGGAAGAGGTTTCACTGCCTTCAT
TTTCTCTTGGCTTACCAGCATATTACATACTAGCCTCATCTGAAGCTTCTTCTAATCTAT
CACGCTATGATGGTATCAGGTATGGAAGACAGTTTTCAGCTGATGACTTGAATGAGCTTT
ATGGAGAGTCCAGGGCTAATGGTTTGGGTCATGAGGTCAAAATGAGAATTTTGATGGGAA
CCTATGCTCTTTCTGCCGGGTACTATGATGCATACTACAAACGAGCACAACAGGTGAGGA
CACTGGTTAAGGAAAGCTTCAAAGATGCTTTGGAAAGATATGACATTCTAATTTCACCAG
CTGCGCCATCAGCAGCCTACAAGATAGGTGAAAAGATAAATGATCCATTAGCCATGTACG
CAGGAGATATCTTGACGGTGAATGTTAATTTGGCGGGTCTTCCTGCATTGGTTGTGCCTT
GTGGATTTGTTGAAGGTGGACCTGCAGGGCTCCCAGTTGGACTTCAGCTGATCGGATCTC
CATTCTGTGAGGGGAATTTGCTGAGAGTAGGCCACATCTTTGAGCAGACTCTTCAGAATC
TCAGCTTTGTTCCACCGTTGTTGGCAGAGAGCTAGTCAACATACCGTTGTTGGCAGAGAG
CTAGTTTCAACATAGGCATCTCAGCCGCTCGACAAGCAATTACCTGAGGCCCTTCTGTGC
ATCGACTTCATTCCCATGCGGAAGAGGTTGGTACTACGCGTGTAGAAAATAGAATCTTTG
CCCGTGGAGTTGCTGATAATTGTGAGAGAGCAACGGCACCCATGCGATGTACGCCAGCAA
TCAGCACATTGCATACAGCACAGCATTGTACACACCGACAGAATGATTGATGATTTTGTA
TCAACGTTGGT