Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11259
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:53228504:53234993:1 gene:SORBI_3006G177400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGCTGGTGCGCGGCCCTCGTCGCCGGAGGCCGGCTGCCACCGCCCGCCCTCCCCTGC
CGGCTCCGCCGCCGCCGAAGGAGCTCCGTCCGGGCAGAGGTCTCGCCAGGTGGCGAGTCC
CAGCAGAAGAAGGTCGCCGTCGCGGGCGCCGGCTGGGCCGGCCTTGCCGCCGCGCACCAC
CTCATCAAACAGGGGTACGATGTCACGCTTCTCGCCGCAGAGAGCGGCCCAACCGAGGAG
GTTGGCCTCAGAGGATTCTGGCATCCGTACCGCAACATCTTCGCTTTAGTCGATGAACTG
GGGATTTCGCCTTTCACGGGCTGGAATAAAGCAGCCTACTATTCTACAGAGGGCCTTGCT
GTTGAATTTCCCATATTTCATAACCAGCCCCGATTACCAGCTCCCTTTGGAGTCTTTGCA
TATCCAGAATTCCCAAATCTTCCTTTGATTGATAGGCTGACATCAATTCCTGTCATAGCT
GCAGTCATTGACTTTGACAACACTGACACTGCTTGGAGGAAATATGATGCAATGACTGCA
AAAGAACTTTTTAAGATGTACGGTTGCTCTCAAAGGCTCTACAAGGAAGTCTTTGAGCCA
GCTATTCAGGCTGCCCTGTTTGCTCCTGGCGAGCAATGTAGTGCAGCTGCAACACTGGGG
ATGCTGTACTATTATATGCTGTCTCATCAGGAAAGTTCTGACTTCTTGCTGTGCCGTGGT
GAAGTAGAAGAAAAAATTCTCTCTCCTTGGCTGCAATCATTGGAGCTTAAAGGTTTAAAA
TTTGTAGAAAACAAAGTTCCAACAAGTTTGACTACAGATGCGGATACTGGATGCATCTCT
GCTATTGTCTGTGGTGACTATGTATATGAGGCAGATGCATTTGTTTCAGCCATGGGACTC
TCTTCTCTACAATCCATCGTCAAAAACAGTCCGTTCCTACGGTCTGATCGGGAATTCAGG
AATCTTCTTCACTTATCTACACTCGACGTGATCTCTGTAAAATTATGGTTTGATAAAAAG
GTCACAATTCCAAAGGTTGCCAATGTATGTTCTGGTTTTGATGATTCGTCTGGCTGGGCA
TTCTTTGACCTAACCTCAATACATGATGATTATAATGAAGAATCAATAACAATTGTGGAG
GCTGAATTTTATAATGCTAGCCATTTGATACTTGTAAATGATGATGATATTGTCTCTGAA
GCTTCATCACATCTTATCAAATGCATACAAGATTTTGAGGGTGCTATTGTGATAAGATAT
TCAATCAGAAGATCTCCTAATTCTGTAATCAACTTTCTTCCAGGCTCCTACAAGTACACA
CTGAGAGGATCAACTTCCTTTCCAAATTTGTTTATTGCTGGTGATTGGATTGTCAACCGA
CATGGGTCCTTTTCTAAAGAAAAAGCATATGTGACTGGACTTGAAGCTGCTAATAGGGTG
GTAGACTATTTTGACACCGGGGACTTTGCCAAAATAATTGCAATCGAAGGAGATGAGCCC
CATATAGAGACATTGCGTAGTCTCAACAGAAGAGCCAATGAACTGAAGTCACAAATTCCA
TTCTCAGAATTCTTTCTCCAATAA

Peptide Sequence

PEP ID

EES11259
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:53228504:53234993:1 gene:SORBI_3006G177400 transcript:EES11259 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MCWCAALVAGGRLPPPALPCRLRRRRRSSVRAEVSPGGESQQKKVAVAGAGWAGLAAAHH
LIKQGYDVTLLAAESGPTEEVGLRGFWHPYRNIFALVDELGISPFTGWNKAAYYSTEGLA
VEFPIFHNQPRLPAPFGVFAYPEFPNLPLIDRLTSIPVIAAVIDFDNTDTAWRKYDAMTA
KELFKMYGCSQRLYKEVFEPAIQAALFAPGEQCSAAATLGMLYYYMLSHQESSDFLLCRG
EVEEKILSPWLQSLELKGLKFVENKVPTSLTTDADTGCISAIVCGDYVYEADAFVSAMGL
SSLQSIVKNSPFLRSDREFRNLLHLSTLDVISVKLWFDKKVTIPKVANVCSGFDDSSGWA
FFDLTSIHDDYNEESITIVEAEFYNASHLILVNDDDIVSEASSHLIKCIQDFEGAIVIRY
SIRRSPNSVINFLPGSYKYTLRGSTSFPNLFIAGDWIVNRHGSFSKEKAYVTGLEAANRV
VDYFDTGDFAKIIAIEGDEPHIETLRSLNRRANELKSQIPFSEFFLQ

Transcript Sequence

Transcript ID

EES11259
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:53228504:53234993:1 gene:SORBI_3006G177400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGTGAGGTGAAGACGTGAAGTGCAGTACTGGCGTTCGAGATCGAATTCGACGCTCCGC
TCGTTCGTGGGGCATACAGACGAACACCTCACGGGGACAACCAGGCCACTCGCTCCGCTT
TACTCCGGAACGGAAGCTTCCCGCGGAAAGAATGTGCTGGTGCGCGGCCCTCGTCGCCGG
AGGCCGGCTGCCACCGCCCGCCCTCCCCTGCCGGCTCCGCCGCCGCCGAAGGAGCTCCGT
CCGGGCAGAGGTCTCGCCAGGTGGCGAGTCCCAGCAGAAGAAGGTCGCCGTCGCGGGCGC
CGGCTGGGCCGGCCTTGCCGCCGCGCACCACCTCATCAAACAGGGGTACGATGTCACGCT
TCTCGCCGCAGAGAGCGGCCCAACCGAGGAGGTTGGCCTCAGAGGATTCTGGCATCCGTA
CCGCAACATCTTCGCTTTAGTCGATGAACTGGGGATTTCGCCTTTCACGGGCTGGAATAA
AGCAGCCTACTATTCTACAGAGGGCCTTGCTGTTGAATTTCCCATATTTCATAACCAGCC
CCGATTACCAGCTCCCTTTGGAGTCTTTGCATATCCAGAATTCCCAAATCTTCCTTTGAT
TGATAGGCTGACATCAATTCCTGTCATAGCTGCAGTCATTGACTTTGACAACACTGACAC
TGCTTGGAGGAAATATGATGCAATGACTGCAAAAGAACTTTTTAAGATGTACGGTTGCTC
TCAAAGGCTCTACAAGGAAGTCTTTGAGCCAGCTATTCAGGCTGCCCTGTTTGCTCCTGG
CGAGCAATGTAGTGCAGCTGCAACACTGGGGATGCTGTACTATTATATGCTGTCTCATCA
GGAAAGTTCTGACTTCTTGCTGTGCCGTGGTGAAGTAGAAGAAAAAATTCTCTCTCCTTG
GCTGCAATCATTGGAGCTTAAAGGTTTAAAATTTGTAGAAAACAAAGTTCCAACAAGTTT
GACTACAGATGCGGATACTGGATGCATCTCTGCTATTGTCTGTGGTGACTATGTATATGA
GGCAGATGCATTTGTTTCAGCCATGGGACTCTCTTCTCTACAATCCATCGTCAAAAACAG
TCCGTTCCTACGGTCTGATCGGGAATTCAGGAATCTTCTTCACTTATCTACACTCGACGT
GATCTCTGTAAAATTATGGTTTGATAAAAAGGTCACAATTCCAAAGGTTGCCAATGTATG
TTCTGGTTTTGATGATTCGTCTGGCTGGGCATTCTTTGACCTAACCTCAATACATGATGA
TTATAATGAAGAATCAATAACAATTGTGGAGGCTGAATTTTATAATGCTAGCCATTTGAT
ACTTGTAAATGATGATGATATTGTCTCTGAAGCTTCATCACATCTTATCAAATGCATACA
AGATTTTGAGGGTGCTATTGTGATAAGATATTCAATCAGAAGATCTCCTAATTCTGTAAT
CAACTTTCTTCCAGGCTCCTACAAGTACACACTGAGAGGATCAACTTCCTTTCCAAATTT
GTTTATTGCTGGTGATTGGATTGTCAACCGACATGGGTCCTTTTCTAAAGAAAAAGCATA
TGTGACTGGACTTGAAGCTGCTAATAGGGTGGTAGACTATTTTGACACCGGGGACTTTGC
CAAAATAATTGCAATCGAAGGAGATGAGCCCCATATAGAGACATTGCGTAGTCTCAACAG
AAGAGCCAATGAACTGAAGTCACAAATTCCATTCTCAGAATTCTTTCTCCAATAATTTGG
TTGGGATTTTCCTGTGTCTGTTGACCAATGCCCACTGTTGTAGGGCCCATATGTAAAAGG
TCAGCCAGTTCTCATTTTATTTGCTTTATATATTTAACACAAAATACTCTCTTCAATTGA
CATGTATGTCATTTAGCCTTTTCAACTTTCCTCTAAATCTAAGTCATCCTCGAACTTCTA
TGCATCTTTTGCCCTTTTCCTCCCTCTACGCCCCTTGAAATAATTGAGTCATCTTTTACA
ATGCAAGTATAAATGAAGGGCACCGCGGTCATTTAATCTACTTTCTTAACCTTGTTCACA
AGTCTAAAATAATTTGGAATTTGAGGGAGTATTATTTCTTCTGCTGTGCGCATTGGCCAA
CCTTTGGCCTGAGATCATGTGTTCCTGGTTACTTTTGTGAAAGACTGAATTAATAGTCTA
AAAAGGCTATATAATATTCTATTAAAAAATCTTGCTCAAAAAATATTCTATTAAAAAGGA
AGAAAATGTGGGTTGAGGCACCAATAACTTTTTTATACGCAAACAAAGGTTAGTTTGCAA
TTTACATTGGAAAAAAGATACACTATCTCCCCAGCGGTGCAACTTATATGAATTCAGTGG
AAATATGGATGGATATGTAAATTTATGTATGTGATGTTACCAGTGTTAGCTACTTTTCCG
ATGGCTTTGAGCTGCTTCAGGTGAATAATACCTAACAGAAATTATGTCATCCTATCCCTG
TATTTGTTATTATCTGCTGACCCCGCAATAGCATTTGCAAGTTCATATGCTGCACACATT
ATGGTTTACCATGAACTTTGTAATTTTGTTCAAGCATGTGTTTTCCTTTCCTGATCCTAA
TTTTGAACATACTTATTTTAAATAAAGCTTCACAAAATGTACCATTAGTGAAATTTACTT
GCAGTAGGATTAGTGCCAGTTTTCTGGTAGGCTGTATGTTTTTTTGCATATGTATGATTC
CATGAATTCTGCCAACACTCTTACGGTGCAGCTGGTCAGCACAACACGCCATAGAAGCGG
TTGGCTGAGCCAGCCCGGGTTCGAGTCATGACACCATCTTCTTAAGACGAAAATCAGGGG
GACGTCTCTCCCCCTGGTCGAGTCTTTTTTATTCCATGAATTCTGAACATTTTCTCTCTT
GTTGCATATTCGGTCAATAATAACTGTACATACTAGTTTTGGACCATAACTGTAGAAGCA
ACTTGTTTGGAGTTAAACTTGCATTGTTGCTTGTACTTGCCATATTTGCTGAAACATATA
TATACAACCTCTTCCATCATGAGAATTGCGAACAGAGTTTCCTCAGGTATAACTTCCCTT
CTTCATCATTTCTACAAACTCTTCATAGTCGATTCTCCCATCCTGTTAATTCAGAGGGGG
GCGATTGTTAAATTTATGCAAATGGATTGGGTAGCAGCAAGAATGTGCTCACCTTGTCTT
TGTCAACTTCATCTAGTACTTCTTTAATGCTTGCTTCATCACTGATTCCATACTCCGCCA
TGGCTTGTTGCAGTTCATCTCTTGTTATGTACCTGTGGTTGTTATACATGTTATCTCAGT
TGAATTATATTAAACTTTTTTGTTTTTTCGTAATTGAGTTTAACCAAGCAAAACGATGTG
ATGTGGCAGTAGCATGTATTTGTATTGTTAATTTGTTATATTATGAACAATTTGAGCAGC
GTGTAATTTTATTTTATAAGTTCTAGCATGGTTCAACTGTATAGGTCTTTGTTTTAGTGA
TGCATCGATAGTATATTACTTTCTTGGTTAGGAAGAATTAATTTTACCCGCTATCATCTT
TGTCAAAGTGTTGAAATGCACGGATCAAATCCTCCTCCTTTTCCAGTTTATGTTTATTCA
TCATGGCAGTAAGGAACTCTGCGTAATCAATGCTGCCACTCTTGTCCACGTCAACCTGCA
TCGAAGCATGATTAGTGAAGTATTTCATACACAAAACTTAGTGAAAGTGGAATGGAATCA
GCAATCTTACTGCTTCCATAAGCTTCTGAACCTCCGCTTCACTAATCTTTGACCCTAGTT
TTGTCAGTCCTTCCTTCAGTTCTTCGACTGTGATCGTGCCACTCTTGTCTGTATCCATGT
TGTTGAACATCTGCTTCAGTCCCTTGATCTCGTCTTCTGTTAGGTTCTCCGCGATTACCT
TACAATGACAGGAGACAATTTGTCAACTTAAACTGACATAGGCGAAGTAGCAGTTATTCT
TGTTAAGGAGGTTCACCTTGAGTGCAAGTTGCTTTAGCTTGTTCATTGCCTTGAATTGCT
TCATTCTTGACAGGACTGCGCTATCGATAGGTCTGTCAGGTGCACCACCTTTGAGCCATG
GATGTTCTGCACATGGAGTCATCCATTTATTTGGGATGAAGTATAAAACGTGGAAATGCA
GATGAGCTTTACACTCATAACTCAAGTGTTGTATGAAAAGGCAGTTGAGAGTGCTACCTA
GGGCCTGTACTGCAGTAATGCGCCTCCGAGGATCCCTGTTCAACATTCTTCTAATGAGAT
CCTTTGCATTTTCAGATATGGAGGGCCACGGGGAGGAGATTAAATCAAGTTCGCCGGCCA
ATATTGCATCAAATATGCCTTTCTCCGTTTCTGCTCATCAGATACACAAATTCTGTCATC
AGCCAATCATACTGGAGGCAATGTAGTAGTCTGTCAGGATGAAGATGTTTGGATCTTCAC
CCACCTGCCCAGAAAGGCGGTGACCCGCATAGAAGAATGTATAGGATCACGCCAGCACTC
CAGACATCAATCTCTCTGCCGTAATTCCGGTGCAGTACCTCTGGCGCCACATAGTACGCA
CTTCCCACGATGTCCTTGTAAACTTTACCTGCAATTTGTTGGGGGTGGGGGGGAATTGAA
TTGTCTAGTGTTATCACATCATTTGCATGGAACAGTTGCATTTTACTTGAATGAATATAA
TGATGAGCAAATAAAGCTAACCTTCTTCGATGAAGACGGAGAGGCCGAAGTCGATGGCCT
TGAGCGGCGCGTCGTCGGCGGGGCTG