Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11238
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:52793159:52794884:1 gene:SORBI_3006G171600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCAAGAACACATGCAAGCTATGCTCCCGCCGCTTCGCCAGCCCGCGCGCCCTCGCC
GGCCACATGCGCGCCCACTCCGTTGCCGCCGCTAAGTCGCAGATCTCCTCGGCGTCGTCG
GCTTCGACCTCCATCGCGGCCGGCGGCGGCATCGACGACGACGCTGCCGACGCAAAGAAG
AAGCCCAGCCCCATCCAGGGGGGGCACGTGCTGCGGGAGAAGAATCCCAAGCGCCGCGTC
CGCCTCGACGACGACTCCGACTTCTCGGATCGCGAGAGCGAGACGACGGACTACTACTCC
CCGGCGTCGCCGGACGCCAAGCGCTCGCACGCCGGATCGGGGGACGCGGAGCCGGTGAGC
TCGGTCTCCGACGCGGCCACGCCGGAGGAGGACGTCGCGCTGTCCCTGATGATGCTCTCC
CGCGACTCCTGGCCCGCGCCGCCGCCGTCGCCGTACCCGTACCCGTTCCGCCTCGACTCC
GACGACGACGACGACGACGCCCGCCGCGTGGTGGCCGCCGCCACCGCCGCCGCCGCCGCG
GCGCAGCAGAAGCGGACGCGGTACGAGTGCCCCGCGTGCAAGAAGGTGTTCCGATCGTAC
CAGGCCCTCGGGGGCCACCGTGCCAGCAACGTGCGCGGCGGCAGGGGCGGCTGCTGCGCG
CCGCCGCTCAGCACTCCTCCGCCTCCCGGCCCGGCCCCGCTGCAGCCATTGCCAGAATGC
GAGGGCAGCGAGGAGGACTCCAAGGCGCAGCAGCCGCACGAGTGCCCCTACTGCTTCCGC
GTGTTCCCGTCCGGGCAAGCTCTCGGCGGCCACAAGCGGTCTCACCTCTGCTCGGCTGCG
GCGGCGGCAGCAGCAGCAGCCGTCACATCAAGCGCTGATCCTTCGTCGATCACAATGAAG
AGCCTGGATTTCATTGATCTGAACCTCCCCGCGCCCTTCGACGACGTGGAAGTCTCCGCC
TTTTCAGATCCCTTCCTCTCGTCCAAGCCAGCAGGTTCTTGA

Peptide Sequence

PEP ID

EES11238
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:52793159:52794884:1 gene:SORBI_3006G171600 transcript:EES11238 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAKNTCKLCSRRFASPRALAGHMRAHSVAAAKSQISSASSASTSIAAGGGIDDDAADAKK
KPSPIQGGHVLREKNPKRRVRLDDDSDFSDRESETTDYYSPASPDAKRSHAGSGDAEPVS
SVSDAATPEEDVALSLMMLSRDSWPAPPPSPYPYPFRLDSDDDDDDARRVVAAATAAAAA
AQQKRTRYECPACKKVFRSYQALGGHRASNVRGGRGGCCAPPLSTPPPPGPAPLQPLPEC
EGSEEDSKAQQPHECPYCFRVFPSGQALGGHKRSHLCSAAAAAAAAAVTSSADPSSITMK
SLDFIDLNLPAPFDDVEVSAFSDPFLSSKPAGS

Transcript Sequence

Transcript ID

EES11238
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:52793159:52794884:1 gene:SORBI_3006G171600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGCAGTTCCGCTATATTCTAACTCCCCCACGGAGGCAGGGGGGCAGGGCAGTTCTCTCT
CGCTCGCTCGTCTCCTCCAAGAGCTCGTATTTTTAGCTCTCCCGAGCTCTCTCCCATCAA
GCTCTCCAAGCTCTCCCTCGCCATGGCCAAGAACACATGCAAGCTATGCTCCCGCCGCTT
CGCCAGCCCGCGCGCCCTCGCCGGCCACATGCGCGCCCACTCCGTTGCCGCCGCTAAGTC
GCAGATCTCCTCGGCGTCGTCGGCTTCGACCTCCATCGCGGCCGGCGGCGGCATCGACGA
CGACGCTGCCGACGCAAAGAAGAAGCCCAGCCCCATCCAGGGGGGGCACGTGCTGCGGGA
GAAGAATCCCAAGCGCCGCGTCCGCCTCGACGACGACTCCGACTTCTCGGATCGCGAGAG
CGAGACGACGGACTACTACTCCCCGGCGTCGCCGGACGCCAAGCGCTCGCACGCCGGATC
GGGGGACGCGGAGCCGGTGAGCTCGGTCTCCGACGCGGCCACGCCGGAGGAGGACGTCGC
GCTGTCCCTGATGATGCTCTCCCGCGACTCCTGGCCCGCGCCGCCGCCGTCGCCGTACCC
GTACCCGTTCCGCCTCGACTCCGACGACGACGACGACGACGCCCGCCGCGTGGTGGCCGC
CGCCACCGCCGCCGCCGCCGCGGCGCAGCAGAAGCGGACGCGGTACGAGTGCCCCGCGTG
CAAGAAGGTGTTCCGATCGTACCAGGCCCTCGGGGGCCACCGTGCCAGCAACGTGCGCGG
CGGCAGGGGCGGCTGCTGCGCGCCGCCGCTCAGCACTCCTCCGCCTCCCGGCCCGGCCCC
GCTGCAGCCATTGCCAGAATGCGAGGGCAGCGAGGAGGACTCCAAGGCGCAGCAGCCGCA
CGAGTGCCCCTACTGCTTCCGCGTGTTCCCGTCCGGGCAAGCTCTCGGCGGCCACAAGCG
GTCTCACCTCTGCTCGGCTGCGGCGGCGGCAGCAGCAGCAGCCGTCACATCAAGCGCTGA
TCCTTCGTCGATCACAATGAAGAGCCTGGATTTCATTGATCTGAACCTCCCCGCGCCCTT
CGACGACGTGGAAGTCTCCGCCTTTTCAGATCCCTTCCTCTCGTCCAAGCCAGCAGGTTC
TTGAAAGAGTGCTAGCAGAGCAAGCAAGCCGGCCGCCCGCTCGCCTTTCGGCTGATTCCA
GTGGAGACGATTCGAGGTAAGGATCATCAGAGACAGAAAGAAAAAGACTTACTGATTAAC
GAAGAGCAGTAAGGAAAGTAGAGAAACTTATGATAAAAAAATTGGAGACATCTTTGCTTG
GGTTAGGATGTTCGTTTTTTTCTTAGTAAAGTATATTTGTTCGTGTGCATTGATTCAGTC
AGCTACAATATCTCTGTAGTCCTCCATTTCGTTCTGTCTCTTTGTTTGTTTCAAGCCATG
GAATGGGGCAGCTAACAGAGCTAGCTATAGTTCTTGAATTCTCATCTGAATGAATCAAGA
AAATCCAAAAAGGAGAGCCAGCAGGGAAGAAATACTCTAGCTGAAGCGTTGCTTTCTGTT
GCAGTCTCCAGCTGTGCTCGTTCCAACTGTCCATAGCAGGGAGAGCTTGGCAAAGCCAGC
CGACCCAAGGCAATCGCAGTCATTAGCCGGTAGCCAAAAAACACCAGCATCGAACTGGCG
ATACCAATGCAGGATCGTCGGCCTGACGTTCATGTTTAGTTTGTTG