Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES11002
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:48843726:48848404:1 gene:SORBI_3006G122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCTCCACCTCTCCACTGCTCCTCCTCGCCCTTCTCCTCCTACCCGCGCTCACG
GCGGCGGCCTCGCTCCCGGCGCTGCCGCTCTCGACGGCGTCGCGTTGGATTGTGGGCGCG
GACGGGCGGCGCGTGAAGCTGGCGTGCGCGACCTGGGCTTCGCACCTGGAGCCCGCAGCC
GCGGAGGGCCTGGCGCGGCGCGGCGTGTCGGACATCGCAGCGCGCGTGGCGGCGATGGGG
TTCAACTGCGTCAGGCTCACCTGGCCGACCTATCTCGCCACCAACGTTACGCTCGCTTCG
CTGCCGCTGCGGTGGTCGCTGGAGCGCCTTGGCATGCTGGAGTCCGTCGCCGGCGTGCGG
GTCAACAACCCCGCCCTCCTCGACCTGCCCCTCGTCGACGTGTTCCGGGAAGTGGTGTCA
TCATTAGCCAGCAAAGGTATTATGGTCATACTTGACAACCAAATGACCACTCCAGGATGG
TGCTGCAGCAGAATTGATGGCAATGGCTTCTTTGGAGATGTGTACTTCGACCCTGATGAA
TGGTTGAAAGGCCTCAGTGCAATGGCAACTATGTTTAACAACACAAAAAATGTTGTTGGC
ATGAGCTTGCGGAATGAACTTCGAGGCCCAAAACAAAATGTTAGTTTGTGGTACAGGTAC
ATGCAGATGGGTGCTGAAGCTGTACATGCTGCAAACCCTAACGTCCTGGTTATTTTATCG
GGCCTGGATTTTGACAACACTCTCAGCTTCTTGTTCAAAGAAAAAGTCCACCTATCATTT
TCCGGAAAGTTAGTTTATGAGCAACATTGGTATGGCTTCTCAGATGGTGGCAATTGGGAA
ACTCAGAACCAAAACGATGTTTGTGCGATGGTTGTTGATTTCATATGGGCTAAAGGATTA
TTCCTACTTCAACAAGGCTGGCCGTTGTTTTTCTCTGAGTTTGGATTTGATATGTCAGGC
ACACATATTGGTGACAATCGCTATCTTACCTGCTTCTTAAGTGTGGCAGCTGAAATGGAT
CTGGACTGGTCAATTTGGGCTCTGCAAGGGAGTTACTATATCAGAGAGGGTATTTTAGCT
TATGACGAATCATATGGATTGCTATCATGGGACTGGTGTACGGCTAGAAATCCTAGCTTC
ATTAAAAGGATCAATTCTCTCCAATCACCATTCCAAGGTCCTGGTCTTCCAAACAGTCAA
GAGCCATACAACATAATCTTTCATCCCCAAAGTGGGCTTTGCGTCTTGGCCAGGTCTTCA
AAGTTACTTGAGTTGGGTCCATGCGACGAATCAAACGCCTGGAACTACACCTCAGCATAC
AACCTAGTAGTGAAAAACACAGGACAATGCCTTCAAGTGAAGTCGGTGGGCAAGAATGCA
AAGCTTGGCACCGATTGCAGCAAACCAAGTTCGAAGTGGAACCTGATATCGAATTCAAAG
ATGCATGTTTCGGCTGAGCTCACAAAAAATGGAACCAGGGTTTGCTTGGACGCCAGCCCT
GCTGGTGCCATCATAACAAATCAGTGCAAGTGCCTAAGTGTAGATCCGACCTGTGACCCT
GAGAGTCAGTGGTTCAAAGTGATCGTAAGCAGTAGAGACATACCTGGGGGCGACTCCATC
TTGCAGTTGCCGTCACTTGGTCCCTGGCCTTCGACATCCCTTAGTTCTTGA

Peptide Sequence

PEP ID

EES11002
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:48843726:48848404:1 gene:SORBI_3006G122200 transcript:EES11002 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASTSPLLLLALLLLPALTAAASLPALPLSTASRWIVGADGRRVKLACATWASHLEPAA
AEGLARRGVSDIAARVAAMGFNCVRLTWPTYLATNVTLASLPLRWSLERLGMLESVAGVR
VNNPALLDLPLVDVFREVVSSLASKGIMVILDNQMTTPGWCCSRIDGNGFFGDVYFDPDE
WLKGLSAMATMFNNTKNVVGMSLRNELRGPKQNVSLWYRYMQMGAEAVHAANPNVLVILS
GLDFDNTLSFLFKEKVHLSFSGKLVYEQHWYGFSDGGNWETQNQNDVCAMVVDFIWAKGL
FLLQQGWPLFFSEFGFDMSGTHIGDNRYLTCFLSVAAEMDLDWSIWALQGSYYIREGILA
YDESYGLLSWDWCTARNPSFIKRINSLQSPFQGPGLPNSQEPYNIIFHPQSGLCVLARSS
KLLELGPCDESNAWNYTSAYNLVVKNTGQCLQVKSVGKNAKLGTDCSKPSSKWNLISNSK
MHVSAELTKNGTRVCLDASPAGAIITNQCKCLSVDPTCDPESQWFKVIVSSRDIPGGDSI
LQLPSLGPWPSTSLSS

Transcript Sequence

Transcript ID

EES11002
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:48843726:48848404:1 gene:SORBI_3006G122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACACTGGTTTCTGGGCCCACACGATAGAGATACCTGCCCTCCATTTAAATTCGGATCTCC
GCACACCAACTAATCACCATGGCGGCCTCCACCTCTCCACTGCTCCTCCTCGCCCTTCTC
CTCCTACCCGCGCTCACGGCGGCGGCCTCGCTCCCGGCGCTGCCGCTCTCGACGGCGTCG
CGTTGGATTGTGGGCGCGGACGGGCGGCGCGTGAAGCTGGCGTGCGCGACCTGGGCTTCG
CACCTGGAGCCCGCAGCCGCGGAGGGCCTGGCGCGGCGCGGCGTGTCGGACATCGCAGCG
CGCGTGGCGGCGATGGGGTTCAACTGCGTCAGGCTCACCTGGCCGACCTATCTCGCCACC
AACGTTACGCTCGCTTCGCTGCCGCTGCGGTGGTCGCTGGAGCGCCTTGGCATGCTGGAG
TCCGTCGCCGGCGTGCGGGTCAACAACCCCGCCCTCCTCGACCTGCCCCTCGTCGACGTG
TTCCGGGAAGTGGTGTCATCATTAGCCAGCAAAGGTATTATGGTCATACTTGACAACCAA
ATGACCACTCCAGGATGGTGCTGCAGCAGAATTGATGGCAATGGCTTCTTTGGAGATGTG
TACTTCGACCCTGATGAATGGTTGAAAGGCCTCAGTGCAATGGCAACTATGTTTAACAAC
ACAAAAAATGTTGTTGGCATGAGCTTGCGGAATGAACTTCGAGGCCCAAAACAAAATGTT
AGTTTGTGGTACAGGTACATGCAGATGGGTGCTGAAGCTGTACATGCTGCAAACCCTAAC
GTCCTGGTTATTTTATCGGGCCTGGATTTTGACAACACTCTCAGCTTCTTGTTCAAAGAA
AAAGTCCACCTATCATTTTCCGGAAAGTTAGTTTATGAGCAACATTGGTATGGCTTCTCA
GATGGTGGCAATTGGGAAACTCAGAACCAAAACGATGTTTGTGCGATGGTTGTTGATTTC
ATATGGGCTAAAGGATTATTCCTACTTCAACAAGGCTGGCCGTTGTTTTTCTCTGAGTTT
GGATTTGATATGTCAGGCACACATATTGGTGACAATCGCTATCTTACCTGCTTCTTAAGT
GTGGCAGCTGAAATGGATCTGGACTGGTCAATTTGGGCTCTGCAAGGGAGTTACTATATC
AGAGAGGGTATTTTAGCTTATGACGAATCATATGGATTGCTATCATGGGACTGGTGTACG
GCTAGAAATCCTAGCTTCATTAAAAGGATCAATTCTCTCCAATCACCATTCCAAGGTCCT
GGTCTTCCAAACAGTCAAGAGCCATACAACATAATCTTTCATCCCCAAAGTGGGCTTTGC
GTCTTGGCCAGGTCTTCAAAGTTACTTGAGTTGGGTCCATGCGACGAATCAAACGCCTGG
AACTACACCTCAGCATACAACCTAGTAGTGAAAAACACAGGACAATGCCTTCAAGTGAAG
TCGGTGGGCAAGAATGCAAAGCTTGGCACCGATTGCAGCAAACCAAGTTCGAAGTGGAAC
CTGATATCGAATTCAAAGATGCATGTTTCGGCTGAGCTCACAAAAAATGGAACCAGGGTT
TGCTTGGACGCCAGCCCTGCTGGTGCCATCATAACAAATCAGTGCAAGTGCCTAAGTGTA
GATCCGACCTGTGACCCTGAGAGTCAGTGGTTCAAAGTGATCGTAAGCAGTAGAGACATA
CCTGGGGGCGACTCCATCTTGCAGTTGCCGTCACTTGGTCCCTGGCCTTCGACATCCCTT
AGTTCTTGAAAGTTTGAAAGCAGCTCATTTTCATGTGATGTGACCAAAGAGGACTACGGG
CGAGAATTACGTGGAAAATCTGCAGCGTTGTTGAAGGCAGCTGGATACTGTAGCATTGCA
GTTTGGGTTTTTGTGTACAGTGTGAATAATCTATATTATGCTTTGGAAGTAAGCTGTTTC
TTACTTGGTGTGGCGTTTGTGGCCGACAAGGCCGAGTATGTTCCTCTGTAATTTGGTTTC
ATACATGTTCATGTATATGTTGCATGTACCAAGACATGATTAGATATCCACCATCACCAT
GTTCATGTATATGTTGCATGTACGAAATCTTCGAGAGTTAAAGGAAACTGAGATAGCTCA
GTTAATTAGACCAA