Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES10974
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:48378645:48384916:1 gene:SORBI_3006G116000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGAGGAGCGGCCGTGCCTGCTCCGTTCTTGCGTCGCTCCTGCTGCTGCTGTGGCTG
GGCGTCGCCGCCGCGCAGAAGGCCTCGTCTTGGAAGACATTGAGCGGCAAGGCTCCAGCA
ATCGTAGCCAAGGGTGGATTTTCCGGGCTATTCCCCGATTCAAGCGAATATGCTTATCAA
TTTGCTCTGGTCGCTAGCTCGCCGGATACAATACTGTACTGCGATGTGCGGCTGACCAAG
GATGAGATTGGCATTTGCCTGCCGGACATCAGGATGGATAACTGCACAAACATTCCAGAT
TTCTATGCGCAGGGTCAGAAGAGCTACCTCGTCAATGGTGTGCCTACCTCGGGATGGTTC
TCGGTGGACTACAATGGCACTGAGCTTGGACAAGTAACTCTCAAGCAGTCAATCAATTCT
CGGACGCCCAGATTTGATTCAAGTTTCTTTGCGCTACTTGCTGTTGAAGATGTGCAGTCC
AAGTTCAAACCTCCAGGAATTTGGCTCAATGTTCAGCATGACAGTTTCTACAGCCAGTTC
AATCTAAGCATGAGGAATTATATCATTTCTGTATCTAAGCGTGTTGTTGCCAATTATATC
TCATCACCTGAAGTGAGCTTCCTCACCAGCATACTTGGAAGAATTAGCAACAAAACAAAG
CTTGTGTTCCGCTTTCTTGATGAGAGCACTCTCGAGCCATCTATGAACCAGACATATGGC
TCCATGATGAAAAATCTTACATTTGTTAAGACATTTGCATCTGGGATACTTGTCCCAAAG
AGTTATATTTGGCCTAATTCACCAGACAATTATCTGCAACCATACACTTCAGTTGTTGAT
GATGCTCATAAAGCAGGCTTGGAAATCTATGCTGCTGATTTTGCAAATGATTTTCTGCTC
AGTTACAACCACAGCTATGATCCCTTAGCAGAATATCTCTCATTCATTGATAATGATGTC
TTCTCAGTTGATGGTGTATTGACTGATTTCCCTGTCACAGCATCAGAGGCAATTGGATGT
TTTACCAATTTAAACAAAAGCAACACTGATCATGGAAAGCCTTTAATTATATCACACAAT
GGTGCTAGTGGGGATTACCCAGGGTGCACTGATCTAGCTTATCAAAAAGCAGTTGATGAT
GGTGCAGATGTCATTGATTGCCCTGTTCAAGTGACCAAAGATGGAATACCAATATGCTTG
TCTTCCATTGACCTAATGACCGATACTACTATTGCAAGATCGCAATTCATCTCTCAGACT
GCCACGATAAAGGATATTCAGATTGCACCAGGGGTTTTTAGTTTCAACCTCACCTGGGAT
GACATTGTAAAGAACCTGAAACCCAAAATATCCACCCCATGGACCAACTTCAAATTGGAC
CGAAATCCGAGATATAGGAATGCAGGAAAGTTCGTGAGGCTATCAGACTTTTTGGAGTTC
ACAAAAGATAAAGATTTGTCTGGAATCATGATCAGTGTAGAGCATGCTGCCTTCCTGGCA
GGGGAACTTGGGTTTGACATGGTCGACAAAGTTATCAAAGCCCTCGACGATGCTGGTTAC
CATGAACAAACTGCCCAGAAAGTTATGATTCAGTCAGCCGATAGTTCAGTTCTAGAGAAG
TTCAAGGAGCAAACAAAGTATGACCTTGTGTACATGATCAACAAAGAAGTCGGGGACGCT
GCACCTTCCTCGCTCGCGGACATTAAAAAGTTTGCTAGTGCCGTTTCCGTTGATACTAGC
TCTGTCTTCCCTGAAACCCACTACTTCACAGTGTATGAAACCAATCTTGTCCAGACACTG
CAGTCGGCAGGCCTCTCGGTCTACGTTTATACTCTTATGAACGAGTTTCCGTCTCAGCCA
TACGACTTCTTCTCAGATGCTACAGCGCAGATTAATGCCTATGTCAAGGGTGCTCTCGTG
GATGGGCTAATCACGGATTTCCCTGCTACAGCTCGAAGATACAAGGTGAACAGTTGCATG
AACATGGGGAACAATACGCCGAATTTCATGGCCCCTGTTCATCCCGGTGATCTCATGCAA
AGCATTAGCAGGAGTGCGCAGCCACCAGCATTGGCTCCCATTCCGCCCTTGACCGAGTCC
GATGTGGCACAGCCGCCTTTGCCTCCTGCCAGATCAAACAGCAGTACAGTTCCGACGCAA
TCACCCGCGAGCAGGACGCATGCCTGTGCTGCTCACATCCCAGTCCTTGTCACACTGGCA
ATACTTTGCACTTGGCGTTCCCTGGTCTGA

Peptide Sequence

PEP ID

EES10974
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:48378645:48384916:1 gene:SORBI_3006G116000 transcript:EES10974 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRRSGRACSVLASLLLLLWLGVAAAQKASSWKTLSGKAPAIVAKGGFSGLFPDSSEYAYQ
FALVASSPDTILYCDVRLTKDEIGICLPDIRMDNCTNIPDFYAQGQKSYLVNGVPTSGWF
SVDYNGTELGQVTLKQSINSRTPRFDSSFFALLAVEDVQSKFKPPGIWLNVQHDSFYSQF
NLSMRNYIISVSKRVVANYISSPEVSFLTSILGRISNKTKLVFRFLDESTLEPSMNQTYG
SMMKNLTFVKTFASGILVPKSYIWPNSPDNYLQPYTSVVDDAHKAGLEIYAADFANDFLL
SYNHSYDPLAEYLSFIDNDVFSVDGVLTDFPVTASEAIGCFTNLNKSNTDHGKPLIISHN
GASGDYPGCTDLAYQKAVDDGADVIDCPVQVTKDGIPICLSSIDLMTDTTIARSQFISQT
ATIKDIQIAPGVFSFNLTWDDIVKNLKPKISTPWTNFKLDRNPRYRNAGKFVRLSDFLEF
TKDKDLSGIMISVEHAAFLAGELGFDMVDKVIKALDDAGYHEQTAQKVMIQSADSSVLEK
FKEQTKYDLVYMINKEVGDAAPSSLADIKKFASAVSVDTSSVFPETHYFTVYETNLVQTL
QSAGLSVYVYTLMNEFPSQPYDFFSDATAQINAYVKGALVDGLITDFPATARRYKVNSCM
NMGNNTPNFMAPVHPGDLMQSISRSAQPPALAPIPPLTESDVAQPPLPPARSNSSTVPTQ
SPASRTHACAAHIPVLVTLAILCTWRSLV

Transcript Sequence

Transcript ID

EES10974
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:48378645:48384916:1 gene:SORBI_3006G116000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCTCTCCCGTCCGGCCATCCCCTCTCCTCTCTTCCAAGTTCCAACGCAGCTCACCACT
ACTTCTCCTCATCGTCCCTCCAGTTCATCGTCTCCGTCTGCAGGGCTTAAATACTACAAC
AAAGCGATTGCGGCGGTGGCGGCCGGCTCAGCGATTTCTCCACCAGGACCATCACCGCTG
CCTTCTTGGCCTCTTGGGCGGCGGCACTGCGGCATTGTCGGTCCAGAGCAGCGCTGGTTC
CTGAACTGGGCGCTTGCGCTGAGCTCTCCCTGCCCTGCTGCCGGAGGCAATGAGGAGGAG
CGGCCGTGCCTGCTCCGTTCTTGCGTCGCTCCTGCTGCTGCTGTGGCTGGGCGTCGCCGC
CGCGCAGAAGGCCTCGTCTTGGAAGACATTGAGCGGCAAGGCTCCAGCAATCGTAGCCAA
GGGTGGATTTTCCGGGCTATTCCCCGATTCAAGCGAATATGCTTATCAATTTGCTCTGGT
CGCTAGCTCGCCGGATACAATACTGTACTGCGATGTGCGGCTGACCAAGGATGAGATTGG
CATTTGCCTGCCGGACATCAGGATGGATAACTGCACAAACATTCCAGATTTCTATGCGCA
GGGTCAGAAGAGCTACCTCGTCAATGGTGTGCCTACCTCGGGATGGTTCTCGGTGGACTA
CAATGGCACTGAGCTTGGACAAGTAACTCTCAAGCAGTCAATCAATTCTCGGACGCCCAG
ATTTGATTCAAGTTTCTTTGCGCTACTTGCTGTTGAAGATGTGCAGTCCAAGTTCAAACC
TCCAGGAATTTGGCTCAATGTTCAGCATGACAGTTTCTACAGCCAGTTCAATCTAAGCAT
GAGGAATTATATCATTTCTGTATCTAAGCGTGTTGTTGCCAATTATATCTCATCACCTGA
AGTGAGCTTCCTCACCAGCATACTTGGAAGAATTAGCAACAAAACAAAGCTTGTGTTCCG
CTTTCTTGATGAGAGCACTCTCGAGCCATCTATGAACCAGACATATGGCTCCATGATGAA
AAATCTTACATTTGTTAAGACATTTGCATCTGGGATACTTGTCCCAAAGAGTTATATTTG
GCCTAATTCACCAGACAATTATCTGCAACCATACACTTCAGTTGTTGATGATGCTCATAA
AGCAGGCTTGGAAATCTATGCTGCTGATTTTGCAAATGATTTTCTGCTCAGTTACAACCA
CAGCTATGATCCCTTAGCAGAATATCTCTCATTCATTGATAATGATGTCTTCTCAGTTGA
TGGTGTATTGACTGATTTCCCTGTCACAGCATCAGAGGCAATTGGATGTTTTACCAATTT
AAACAAAAGCAACACTGATCATGGAAAGCCTTTAATTATATCACACAATGGTGCTAGTGG
GGATTACCCAGGGTGCACTGATCTAGCTTATCAAAAAGCAGTTGATGATGGTGCAGATGT
CATTGATTGCCCTGTTCAAGTGACCAAAGATGGAATACCAATATGCTTGTCTTCCATTGA
CCTAATGACCGATACTACTATTGCAAGATCGCAATTCATCTCTCAGACTGCCACGATAAA
GGATATTCAGATTGCACCAGGGGTTTTTAGTTTCAACCTCACCTGGGATGACATTGTAAA
GAACCTGAAACCCAAAATATCCACCCCATGGACCAACTTCAAATTGGACCGAAATCCGAG
ATATAGGAATGCAGGAAAGTTCGTGAGGCTATCAGACTTTTTGGAGTTCACAAAAGATAA
AGATTTGTCTGGAATCATGATCAGTGTAGAGCATGCTGCCTTCCTGGCAGGGGAACTTGG
GTTTGACATGGTCGACAAAGTTATCAAAGCCCTCGACGATGCTGGTTACCATGAACAAAC
TGCCCAGAAAGTTATGATTCAGTCAGCCGATAGTTCAGTTCTAGAGAAGTTCAAGGAGCA
AACAAAGTATGACCTTGTGTACATGATCAACAAAGAAGTCGGGGACGCTGCACCTTCCTC
GCTCGCGGACATTAAAAAGTTTGCTAGTGCCGTTTCCGTTGATACTAGCTCTGTCTTCCC
TGAAACCCACTACTTCACAGTGTATGAAACCAATCTTGTCCAGACACTGCAGTCGGCAGG
CCTCTCGGTCTACGTTTATACTCTTATGAACGAGTTTCCGTCTCAGCCATACGACTTCTT
CTCAGATGCTACAGCGCAGATTAATGCCTATGTCAAGGGTGCTCTCGTGGATGGGCTAAT
CACGGATTTCCCTGCTACAGCTCGAAGATACAAGGTGAACAGTTGCATGAACATGGGGAA
CAATACGCCGAATTTCATGGCCCCTGTTCATCCCGGTGATCTCATGCAAAGCATTAGCAG
GAGTGCGCAGCCACCAGCATTGGCTCCCATTCCGCCCTTGACCGAGTCCGATGTGGCACA
GCCGCCTTTGCCTCCTGCCAGATCAAACAGCAGTACAGTTCCGACGCAATCACCCGCGAG
CAGGACGCATGCCTGTGCTGCTCACATCCCAGTCCTTGTCACACTGGCAATACTTTGCAC
TTGGCGTTCCCTGGTCTGAGCTTGCAATGCAGGCAGAGCTGGAGCACCGATCTACTAATC
AGATATTCTTCCCCACCTGTAGCAGTAGTTCGTTTGTTCAGTGAATTTGCATCTAGGGGT
CTGATGCGGAATGCCTATGACACTCCTGTGAGCTCTCCCTGCTGACATTTCAGTACATAT
ATACTATGTGGGATGGGTAATATATTTTCCATTTCTTCTTCTCAAGACTATTGACCATGT
CCTCACAAAGAAATTAGGCTATGGTCATATGTAAGCAAGTAAGCAACTCAGATTGCATAG
TTGTATGCTATCTGTTTGAGCCTATGAGCCATGAACTGTTATGTTCTGAACGGCTGAGAA
ATATGAAAGGATGGATGTGTTTCCGGGTGGACTTGTGATCTCTTACTAATCTGAATAGGT
GTGTTCTTTCATGTGCGCCGTACTATGCAGGTGCTGGTGCTCCTGACTTGGCAGTTGTTA
AGTTGGCATACAATGTCGATGAGTTCTTCCTTCTCCAGGCTTCGGACGATATTTGCCCCT
GCAATCCTACAGTCTGCTGATTCGGAGGCCACGTTAAGTTGGCATGCCCTCATCCAGGTC
GTTTACCCAGAGGCCAGAGCTGAGCTTGCTGGAACTTGCAGTTGAGTCAGGTAGGCCTCA
TTATAATCAGATCCACCTGCCACTCTACCAGTGAATCAGTGATTCTACTTGCCAGTTGCC
GGTCTTGGATACCAGAGGCATTGCGTGATGTCCATGACTCCATGGTAACCAGAGGCACTT
GTGTGATGTCCATGACTCCATGGTAACCATAGGCCTAAGCGCCAAGGCCTACTAGGCTAC
CAGGACCTCGATTGGCAATTACTCCATTCATCACCCATATTTTGATTTGCCGAAAACGAC
CTGCAAATCTGGTTCTGATCTCATCACCAGCATTGTTCATGATAAGATAAGCACAGTGAT
GGACAGCCACATGCACGTGATAAGGAGATGTTCGGTTTGCACTTTGCACCTAGTCCCTTT
TGAGGGTAAAATCTTATCTTCTTTCTTACTTGTGTGATCTCCGTCATCTTCTTTTCCTCA
CAAAAGGTCAGCAACTTGGCCATTAACCTGCCATGAGCCATCATGGCCCCCTTGTAATCC
CTTCGAGGCGGCGGGAAGGATAGTGATGGCCAGTGCCAGCAGAGTCGGGCTTGCTGTTTG
CAGTCGTTCCTCTGACCTGATAGCTTGATCTGCAGCTGTCTCGCGGTAGGGCGCCGTTGC
TCTGCTGTTGGTATGATCTGAGAACTCATCTGACTGCCTCGCGAAATCAAAGCATGAAGA
TCCATGTGTTTCCAAGTTTCGAACAGAGCATGGACCAGAAAAGGGAACAGGGACCAAATT
CTCCAGCAGAAGAACAACATGTCAATTACTTTTACCAGCAGAAAGTATGTTTGCGCGCGC
CAGCCGCTCGCCGCCAGGCGCCCATGCTACCTCCGCTCTACCGGCATCCTCGCCGCAGGT
GCGGACGGCACCACACGCCATGACGCCACCGACAGGGGCGCTCTGACCACCGCGCAGTCC
GCCGCCGACGCGGCCGCCGGCCGCACAAGCGACAGCACGTCCCAGAAAGACGTAGGACGA
TGAGATCAGCGACACGAGGTCGCTGAAACTCCCAAGAAACCCAATTTTCCTTTTGGCCCT
CTCTCCCTCTGCGCCCAAGATCACATACATGCCAACGCATGTCTTGTTCACTTGTGTGTC
AACAGACTCGAGAACGTATCGGAGAGCTCGAGCTCGCCTACATGGG